RNA–Protein interactions for RNA: ENST00000546509.5

ERGIC2-202, Transcript of ERGIC and golgi 2, humanhuman

TSL 3

Gene ERGIC2, Length 308 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC2-202ENST00000546509 UTP4Q969X6 686 aaKnown RBP11.46□□□□□ -0.57
ERGIC2-202ENST00000546509 FAM46AQ96IP4 442 aaKnown RBP11.46□□□□□ -0.57
ERGIC2-202ENST00000546509 SUPT5HO00267 1087 aaKnown RBP11.45□□□□□ -0.58
ERGIC2-202ENST00000546509 GSC2O15499 205 aa11.45□□□□□ -0.58
ERGIC2-202ENST00000546509 PEAR1Q5VY43 1037 aaPredicted RBP11.45□□□□□ -0.58
ERGIC2-202ENST00000546509 ARMC10Q8N2F6 343 aa11.45□□□□□ -0.58
ERGIC2-202ENST00000546509 RNF208Q9H0X6 261 aa11.45□□□□□ -0.58
ERGIC2-202ENST00000546509 LATS2Q9NRM7 1088 aa11.45□□□□□ -0.58
ERGIC2-202ENST00000546509 SOX1O00570 391 aaPredicted RBP11.44□□□□□ -0.58
ERGIC2-202ENST00000546509 NEFLP07196 543 aa11.44□□□□□ -0.58
ERGIC2-202ENST00000546509 ANKRD34AQ69YU3 496 aa11.44□□□□□ -0.58
ERGIC2-202ENST00000546509 NBPF11Q86T75 865 aa11.44□□□□□ -0.58
ERGIC2-202ENST00000546509 RUSC1Q9BVN2 902 aa11.44□□□□□ -0.58
ERGIC2-202ENST00000546509 SART1O43290 800 aaKnown RBP11.43□□□□□ -0.58
ERGIC2-202ENST00000546509 NDUFB5O43674 189 aa11.43□□□□□ -0.58
ERGIC2-202ENST00000546509 HYAL3O43820 417 aaPredicted RBP11.43□□□□□ -0.58
ERGIC2-202ENST00000546509 MYRFLQ96LU7 910 aa11.43□□□□□ -0.58
ERGIC2-202ENST00000546509 POLR3DP05423 398 aaPredicted RBP11.42□□□□□ -0.58
ERGIC2-202ENST00000546509 ECM1Q16610 540 aa11.42□□□□□ -0.58
ERGIC2-202ENST00000546509 RETREG2Q8NC44 543 aa11.42□□□□□ -0.58
ERGIC2-202ENST00000546509 SOX17Q9H6I2 414 aaPredicted RBP11.42□□□□□ -0.58
ERGIC2-202ENST00000546509 MEGF11A6BM72 1044 aa11.41□□□□□ -0.58
ERGIC2-202ENST00000546509 IGLV1-40P01703 118 aa11.41□□□□□ -0.58
ERGIC2-202ENST00000546509 ARHGAP4P98171 946 aa11.41□□□□□ -0.58
ERGIC2-202ENST00000546509 PDE3BQ13370 1112 aa11.41□□□□□ -0.58
ERGIC2-202ENST00000546509 HGSNATQ68CP4 663 aa11.41□□□□□ -0.58
ERGIC2-202ENST00000546509 FDX2Q6P4F2 183 aa11.41□□□□□ -0.58
ERGIC2-202ENST00000546509 EIF4EBP3O60516 100 aaPredicted RBP11.4□□□□□ -0.58
ERGIC2-202ENST00000546509 TXNDC2Q86VQ3 553 aa11.4□□□□□ -0.58
ERGIC2-202ENST00000546509 GALNT12Q8IXK2 581 aa11.4□□□□□ -0.58
ERGIC2-202ENST00000546509 ESRRAP11474 423 aaPredicted RBP11.39□□□□□ -0.59
ERGIC2-202ENST00000546509 CITED4Q96RK1 184 aa11.39□□□□□ -0.59
ERGIC2-202ENST00000546509 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.38□□□□□ -0.59
ERGIC2-202ENST00000546509 FAM20CQ8IXL6 584 aa11.38□□□□□ -0.59
ERGIC2-202ENST00000546509 USP26Q9BXU7 913 aa11.38□□□□□ -0.59
ERGIC2-202ENST00000546509 C7orf69Q9H7B7 122 aa11.38□□□□□ -0.59
ERGIC2-202ENST00000546509 A0A1W2PP55 124 aa11.37□□□□□ -0.59
ERGIC2-202ENST00000546509 METTL12A8MUP2 240 aa11.37□□□□□ -0.59
ERGIC2-202ENST00000546509 BMP3P12645 472 aa11.37□□□□□ -0.59
ERGIC2-202ENST00000546509 NUTM2GQ5VZR2 741 aa11.37□□□□□ -0.59
ERGIC2-202ENST00000546509 CLEC10AQ8IUN9 316 aa11.37□□□□□ -0.59
ERGIC2-202ENST00000546509 CCNJLQ8IV13 435 aa11.37□□□□□ -0.59
ERGIC2-202ENST00000546509 TRIM42Q8IWZ5 723 aa11.37□□□□□ -0.59
ERGIC2-202ENST00000546509 CCER1Q8TC90 406 aaPredicted RBP11.37□□□□□ -0.59
ERGIC2-202ENST00000546509 LIN7BQ9HAP6 207 aa11.37□□□□□ -0.59
ERGIC2-202ENST00000546509 HIF3AQ9Y2N7 669 aa11.37□□□□□ -0.59
ERGIC2-202ENST00000546509 A0A096LPE4 126 aa11.36□□□□□ -0.59
ERGIC2-202ENST00000546509 A0A1W2PPZ6 126 aa11.36□□□□□ -0.59
ERGIC2-202ENST00000546509 PREPP48147 710 aa11.36□□□□□ -0.59
ERGIC2-202ENST00000546509 NFIAQ12857 509 aa11.36□□□□□ -0.59
ERGIC2-202ENST00000546509 FAM129BQ96TA1 746 aa11.36□□□□□ -0.59
ERGIC2-202ENST00000546509 KCNF1Q9H3M0 494 aa11.36□□□□□ -0.59
ERGIC2-202ENST00000546509 LOC100289279A0A1B0GTE1 492 aa11.35□□□□□ -0.59
ERGIC2-202ENST00000546509 GSTM4Q03013 218 aa11.35□□□□□ -0.59
ERGIC2-202ENST00000546509 FAM83CQ9BQN1 747 aa11.35□□□□□ -0.59
ERGIC2-202ENST00000546509 TMPRSS13Q9BYE2 586 aa11.35□□□□□ -0.59
ERGIC2-202ENST00000546509 CYP4F12Q9HCS2 524 aa11.35□□□□□ -0.59
ERGIC2-202ENST00000546509 HMX2A2RU54 273 aa11.34□□□□□ -0.59
ERGIC2-202ENST00000546509 GAS2O43903 313 aaKnown RBP11.34□□□□□ -0.59
ERGIC2-202ENST00000546509 CPNE3O75131 537 aaKnown RBP11.34□□□□□ -0.59
ERGIC2-202ENST00000546509 USPL1Q5W0Q7 1092 aa11.34□□□□□ -0.59
ERGIC2-202ENST00000546509 RNF43Q68DV7 783 aa11.34□□□□□ -0.59
ERGIC2-202ENST00000546509 BEND4Q6ZU67 534 aa11.34□□□□□ -0.59
ERGIC2-202ENST00000546509 TMC1Q8TDI8 760 aa11.34□□□□□ -0.59
ERGIC2-202ENST00000546509 TCF12Q99081 682 aa11.34□□□□□ -0.59
ERGIC2-202ENST00000546509 CLEC4MQ9H2X3 399 aaPredicted RBP11.34□□□□□ -0.59
ERGIC2-202ENST00000546509 PCDH1Q08174 1060 aa11.33□□□□□ -0.6
ERGIC2-202ENST00000546509 KIAA0319Q5VV43 1072 aa11.33□□□□□ -0.6
ERGIC2-202ENST00000546509 C12orf50Q8NA57 414 aaPredicted RBP11.33□□□□□ -0.6
ERGIC2-202ENST00000546509 SMG8Q8ND04 991 aaKnown RBP11.33□□□□□ -0.6
ERGIC2-202ENST00000546509 SUGCTQ9HAC7 445 aa11.33□□□□□ -0.6
ERGIC2-202ENST00000546509 PCMTD2Q9NV79 361 aa11.33□□□□□ -0.6
ERGIC2-202ENST00000546509 SSTR4P31391 388 aa11.32□□□□□ -0.6
ERGIC2-202ENST00000546509 GRIA4P48058 902 aa11.32□□□□□ -0.6
ERGIC2-202ENST00000546509 ORC1Q13415 861 aa11.32□□□□□ -0.6
ERGIC2-202ENST00000546509 EXOSC6Q5RKV6 272 aaKnown RBP11.32□□□□□ -0.6
ERGIC2-202ENST00000546509 DBNDD2Q9BQY9 259 aa11.32□□□□□ -0.6
ERGIC2-202ENST00000546509 SPRED3Q2MJR0 410 aa11.31□□□□□ -0.6
ERGIC2-202ENST00000546509 EHD4Q9H223 541 aa11.31□□□□□ -0.6
ERGIC2-202ENST00000546509 CD97P48960 835 aa11.3□□□□□ -0.6
ERGIC2-202ENST00000546509 ZNF423Q2M1K9 1284 aa11.3□□□□□ -0.6
ERGIC2-202ENST00000546509 ZDHHC13Q8IUH4 622 aa11.3□□□□□ -0.6
ERGIC2-202ENST00000546509 DNAJC25Q9H1X3 360 aa11.3□□□□□ -0.6
ERGIC2-202ENST00000546509 COBLO75128 1261 aa11.29□□□□□ -0.6
ERGIC2-202ENST00000546509 TIAF1O95411 115 aa11.29□□□□□ -0.6
ERGIC2-202ENST00000546509 DLGAP3O95886 979 aa11.29□□□□□ -0.6
ERGIC2-202ENST00000546509 TGFB1P01137 390 aa11.29□□□□□ -0.6
ERGIC2-202ENST00000546509 DDX54Q8TDD1 881 aaKnown RBP11.29□□□□□ -0.6
ERGIC2-202ENST00000546509 NPHS2Q9NP85 383 aa11.29□□□□□ -0.6
ERGIC2-202ENST00000546509 CYP11A1P05108 521 aa11.28□□□□□ -0.6
ERGIC2-202ENST00000546509 MAP4P27816 1152 aaKnown RBP11.28□□□□□ -0.6
ERGIC2-202ENST00000546509 DMRTB1Q96MA1 342 aa11.28□□□□□ -0.6
ERGIC2-202ENST00000546509 NIF3L1Q9GZT8 377 aa11.28□□□□□ -0.6
ERGIC2-202ENST00000546509 ZFYVE1Q9HBF4 777 aa11.28□□□□□ -0.6
ERGIC2-202ENST00000546509 EIF1AYO14602 144 aaKnown RBP11.27□□□□□ -0.61
ERGIC2-202ENST00000546509 GRIK1P39086 918 aa11.27□□□□□ -0.61
ERGIC2-202ENST00000546509 SGO2Q562F6 1265 aa11.27□□□□□ -0.61
ERGIC2-202ENST00000546509 HP1BP3Q5SSJ5 553 aaPredicted RBP11.27□□□□□ -0.61
ERGIC2-202ENST00000546509 NRSN2Q9GZP1 204 aa11.27□□□□□ -0.61
ERGIC2-202ENST00000546509 SOWAHDA6NJG2 315 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms