RNA–Protein interactions for RNA: ENST00000545250.5

TSC1-208, Transcript of TSC complex subunit 1, humanhuman

TSL 5 BASIC

Gene TSC1, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-208ENST00000545250 NEK11Q8NG66 645 aa10.25□□□□□ -0.77
TSC1-208ENST00000545250 ARHGEF2Q92974 986 aaKnown RBP10.25□□□□□ -0.77
TSC1-208ENST00000545250 NEUROG2Q9H2A3 272 aa10.25□□□□□ -0.77
TSC1-208ENST00000545250 TSHZ2Q9NRE2 1034 aa10.25□□□□□ -0.77
TSC1-208ENST00000545250 ACTN4O43707 911 aaKnown RBP10.24□□□□□ -0.77
TSC1-208ENST00000545250 OCM2P0CE71 109 aa10.24□□□□□ -0.77
TSC1-208ENST00000545250 OCMP0CE72 109 aaPredicted RBP10.24□□□□□ -0.77
TSC1-208ENST00000545250 ZSCAN30Q86W11 494 aa10.24□□□□□ -0.77
TSC1-208ENST00000545250 MICALL1Q8N3F8 863 aa10.24□□□□□ -0.77
TSC1-208ENST00000545250 CHMP6Q96FZ7 201 aa10.24□□□□□ -0.77
TSC1-208ENST00000545250 SRRTQ9BXP5 876 aaKnown RBP10.24□□□□□ -0.77
TSC1-208ENST00000545250 AMOTL2Q9Y2J4 779 aa10.24□□□□□ -0.77
TSC1-208ENST00000545250 E9PMD0 336 aa10.24□□□□□ -0.77
TSC1-208ENST00000545250 RPL13P26373 211 aaKnown RBP10.24□□□□□ -0.77
TSC1-208ENST00000545250 POLD1P28340 1107 aa10.24□□□□□ -0.77
TSC1-208ENST00000545250 NOP14P78316 857 aaKnown RBP10.24□□□□□ -0.77
TSC1-208ENST00000545250 DBN1Q16643 649 aa10.24□□□□□ -0.77
TSC1-208ENST00000545250 ELMSAN1Q6PJG2 1045 aa10.24□□□□□ -0.77
TSC1-208ENST00000545250 MFSD6Q6ZSS7 791 aa10.24□□□□□ -0.77
TSC1-208ENST00000545250 DRC3Q9H069 523 aa10.24□□□□□ -0.77
TSC1-208ENST00000545250 STK24Q9Y6E0 443 aa10.24□□□□□ -0.77
TSC1-208ENST00000545250 FAM95CA0A1B0GW59 222 aa10.24□□□□□ -0.77
TSC1-208ENST00000545250 PPP2R5CQ13362 524 aa10.24□□□□□ -0.77
TSC1-208ENST00000545250 CFAP36Q96G28 342 aa10.24□□□□□ -0.77
TSC1-208ENST00000545250 VAT1LQ9HCJ6 419 aa10.24□□□□□ -0.77
TSC1-208ENST00000545250 SCHIP1Q9P0W5 487 aaPredicted RBP10.24□□□□□ -0.77
TSC1-208ENST00000545250 TYW5A2RUC4 315 aaKnown RBP10.24□□□□□ -0.77
TSC1-208ENST00000545250 TMTC2Q8N394 836 aa10.24□□□□□ -0.77
TSC1-208ENST00000545250 FNBP4Q8N3X1 1017 aaPredicted RBP10.24□□□□□ -0.77
TSC1-208ENST00000545250 KRT10P13645 584 aa10.24□□□□□ -0.77
TSC1-208ENST00000545250 ARHGAP4P98171 946 aa10.24□□□□□ -0.77
TSC1-208ENST00000545250 CCDC152Q4G0S7 254 aa10.24□□□□□ -0.77
TSC1-208ENST00000545250 TMEM67Q5HYA8 995 aa10.24□□□□□ -0.77
TSC1-208ENST00000545250 PDZD8Q8NEN9 1154 aa10.24□□□□□ -0.77
TSC1-208ENST00000545250 ZNF622Q969S3 477 aaKnown RBP eCLIP10.24□□□□□ -0.775e-7■□□□□ 10.7
TSC1-208ENST00000545250 SH2D4AQ9H788 454 aa10.24□□□□□ -0.77
TSC1-208ENST00000545250 UBL4BQ8N7F7 174 aa10.24□□□□□ -0.77
TSC1-208ENST00000545250 ZC3H15Q8WU90 426 aaKnown RBP10.24□□□□□ -0.77
TSC1-208ENST00000545250 L3MBTL2Q969R5 705 aa10.24□□□□□ -0.77
TSC1-208ENST00000545250 SUFUQ9UMX1 484 aa10.24□□□□□ -0.77
TSC1-208ENST00000545250 GNG11P61952 73 aa10.23□□□□□ -0.77
TSC1-208ENST00000545250 NOP9Q86U38 636 aaKnown RBP10.23□□□□□ -0.77
TSC1-208ENST00000545250 SLC13A4Q9UKG4 626 aa10.23□□□□□ -0.77
TSC1-208ENST00000545250 FSIP1Q8NA03 581 aa10.23□□□□□ -0.77
TSC1-208ENST00000545250 P4HA1P13674 534 aa10.23□□□□□ -0.77
TSC1-208ENST00000545250 PANK1Q8TE04 598 aa10.23□□□□□ -0.77
TSC1-208ENST00000545250 TEX12Q9BXU0 123 aa10.23□□□□□ -0.77
TSC1-208ENST00000545250 RSPH14Q9UHP6 348 aa10.23□□□□□ -0.77
TSC1-208ENST00000545250 CCPG1Q9ULG6 757 aa10.23□□□□□ -0.77
TSC1-208ENST00000545250 PHBP35232 272 aa10.23□□□□□ -0.77
TSC1-208ENST00000545250 IARSP41252 1262 aaKnown RBP10.23□□□□□ -0.77
TSC1-208ENST00000545250 ZNF131P52739 623 aa10.23□□□□□ -0.77
TSC1-208ENST00000545250 NFE2L2Q16236 605 aa10.23□□□□□ -0.77
TSC1-208ENST00000545250 PPP1R42Q7Z4L9 355 aa10.23□□□□□ -0.77
TSC1-208ENST00000545250 ORC3Q9UBD5 711 aaPredicted RBP10.23□□□□□ -0.77
TSC1-208ENST00000545250 UTP11Q9Y3A2 253 aaKnown RBP10.23□□□□□ -0.77
TSC1-208ENST00000545250 KRT5P13647 590 aa10.23□□□□□ -0.77
TSC1-208ENST00000545250 THEMISQ8N1K5 641 aaPredicted RBP10.23□□□□□ -0.77
TSC1-208ENST00000545250 HOOK2Q96ED9 719 aa10.23□□□□□ -0.77
TSC1-208ENST00000545250 BUB1BO60566 1050 aaPredicted RBP10.23□□□□□ -0.77
TSC1-208ENST00000545250 ZKSCAN5Q9Y2L8 839 aa10.23□□□□□ -0.77
TSC1-208ENST00000545250 COPG1Q9Y678 874 aaKnown RBP10.23□□□□□ -0.77
TSC1-208ENST00000545250 PPP1R9AQ9ULJ8 1098 aa10.22□□□□□ -0.77
TSC1-208ENST00000545250 CCDC93Q567U6 631 aa10.22□□□□□ -0.77
TSC1-208ENST00000545250 PPP1R12CQ9BZL4 782 aa10.22□□□□□ -0.77
TSC1-208ENST00000545250 CCDC68Q9H2F9 335 aa10.22□□□□□ -0.77
TSC1-208ENST00000545250 TXNDC9O14530 226 aa10.22□□□□□ -0.77
TSC1-208ENST00000545250 VWA3BQ502W6 1294 aa10.22□□□□□ -0.77
TSC1-208ENST00000545250 RNF10Q8N5U6 811 aaKnown RBP10.22□□□□□ -0.77
TSC1-208ENST00000545250 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.22□□□□□ -0.77
TSC1-208ENST00000545250 SND1Q7KZF4 910 aaKnown RBP eCLIP10.22□□□□□ -0.77
TSC1-208ENST00000545250 UBE3BQ7Z3V4 1068 aa10.22□□□□□ -0.77
TSC1-208ENST00000545250 KRT222Q8N1A0 295 aa10.22□□□□□ -0.77
TSC1-208ENST00000545250 NUCKS1Q9H1E3 243 aaKnown RBP10.22□□□□□ -0.77
TSC1-208ENST00000545250 PLCB1Q9NQ66 1216 aa10.22□□□□□ -0.77
TSC1-208ENST00000545250 MAFGO15525 162 aa10.22□□□□□ -0.77
TSC1-208ENST00000545250 IFNA8P32881 189 aa10.22□□□□□ -0.77
TSC1-208ENST00000545250 HS1BP3Q53T59 392 aa10.22□□□□□ -0.77
TSC1-208ENST00000545250 UBLCP1Q8WVY7 318 aaPredicted RBP10.22□□□□□ -0.77
TSC1-208ENST00000545250 TMX1Q9H3N1 280 aa10.22□□□□□ -0.77
TSC1-208ENST00000545250 CDV3Q9UKY7 258 aaKnown RBP10.22□□□□□ -0.77
TSC1-208ENST00000545250 BACH1O14867 736 aa10.22□□□□□ -0.77
TSC1-208ENST00000545250 STRN3Q13033 797 aa10.22□□□□□ -0.77
TSC1-208ENST00000545250 EXOC7Q9UPT5 735 aa10.22□□□□□ -0.77
TSC1-208ENST00000545250 TTC1Q99614 292 aa10.22□□□□□ -0.77
TSC1-208ENST00000545250 SPATS2LQ9NUQ6 558 aaKnown RBP10.22□□□□□ -0.77
TSC1-208ENST00000545250 TTC4O95801 387 aa10.21□□□□□ -0.77
TSC1-208ENST00000545250 RFC4P35249 363 aa10.21□□□□□ -0.77
TSC1-208ENST00000545250 WHAMMP3Q1A5X7 153 aa10.21□□□□□ -0.77
TSC1-208ENST00000545250 NBPF11Q86T75 865 aa10.21□□□□□ -0.77
TSC1-208ENST00000545250 TEX13AQ9BXU3 409 aaPredicted RBP10.21□□□□□ -0.77
TSC1-208ENST00000545250 SLC5A4Q9NY91 659 aa10.21□□□□□ -0.77
TSC1-208ENST00000545250 ARHGEF6Q15052 776 aa10.21□□□□□ -0.77
TSC1-208ENST00000545250 SYCE3A1L190 88 aa10.21□□□□□ -0.77
TSC1-208ENST00000545250 METAP2P50579 478 aaKnown RBP eCLIP10.21□□□□□ -0.77
TSC1-208ENST00000545250 PARD3BQ8TEW8 1205 aa10.21□□□□□ -0.77
TSC1-208ENST00000545250 ESPNB1AK53 854 aa10.21□□□□□ -0.78
TSC1-208ENST00000545250 EPB41P11171 864 aaKnown RBP10.21□□□□□ -0.78
TSC1-208ENST00000545250 IRX3P78415 501 aaPredicted RBP10.21□□□□□ -0.78
TSC1-208ENST00000545250 JADE1Q6IE81 842 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms