RNA–Protein interactions for RNA: ENST00000544454.5

LTBR-213, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-213ENST00000544454 ZC3H15Q8WU90 426 aaKnown RBP16.91■□□□□ 0.3
LTBR-213ENST00000544454 CRBNQ96SW2 442 aa16.91■□□□□ 0.3
LTBR-213ENST00000544454 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.91■□□□□ 0.3
LTBR-213ENST00000544454 A0A1B0GUL6 1792 aa16.91■□□□□ 0.3
LTBR-213ENST00000544454 SCN9AQ15858 1988 aa16.9■□□□□ 0.3
LTBR-213ENST00000544454 SHTN1A0MZ66 631 aa16.9■□□□□ 0.3
LTBR-213ENST00000544454 HIRAP54198 1017 aaPredicted RBP16.9■□□□□ 0.3
LTBR-213ENST00000544454 AAMPQ13685 434 aa16.9■□□□□ 0.3
LTBR-213ENST00000544454 SAMD7Q7Z3H4 446 aa16.9■□□□□ 0.3
LTBR-213ENST00000544454 XAGE2Q96GT9 111 aa16.9■□□□□ 0.3
LTBR-213ENST00000544454 NEUROD6Q96NK8 337 aa16.9■□□□□ 0.3
LTBR-213ENST00000544454 PGAP2Q9UHJ9 254 aa16.9■□□□□ 0.3
LTBR-213ENST00000544454 SEMA3EO15041 775 aa16.89■□□□□ 0.29
LTBR-213ENST00000544454 RAB11FIP3O75154 756 aa16.89■□□□□ 0.29
LTBR-213ENST00000544454 ADORA1P30542 326 aa16.89■□□□□ 0.29
LTBR-213ENST00000544454 TBC1D10BQ4KMP7 808 aaPredicted RBP16.89■□□□□ 0.29
LTBR-213ENST00000544454 CCDC102BQ68D86 513 aa16.89■□□□□ 0.29
LTBR-213ENST00000544454 CERS5Q8N5B7 392 aa16.89■□□□□ 0.29
LTBR-213ENST00000544454 TRPM4Q8TD43 1214 aa16.89■□□□□ 0.29
LTBR-213ENST00000544454 TBC1D22AQ8WUA7 517 aa16.89■□□□□ 0.29
LTBR-213ENST00000544454 HDAC9Q9UKV0 1011 aa16.89■□□□□ 0.29
LTBR-213ENST00000544454 IQSEC3Q9UPP2 1182 aaPredicted RBP16.89■□□□□ 0.29
LTBR-213ENST00000544454 EXOC6BQ9Y2D4 811 aa16.89■□□□□ 0.29
LTBR-213ENST00000544454 PHKA1P46020 1223 aa16.88■□□□□ 0.29
LTBR-213ENST00000544454 TNNI3KQ59H18 835 aa16.88■□□□□ 0.29
LTBR-213ENST00000544454 MFSD14BQ5SR56 506 aa16.88■□□□□ 0.29
LTBR-213ENST00000544454 GORABQ5T7V8 394 aa16.88■□□□□ 0.29
LTBR-213ENST00000544454 RBM26Q5T8P6 1007 aaKnown RBP16.88■□□□□ 0.29
LTBR-213ENST00000544454 KIAA0825Q8IV33 1275 aa16.88■□□□□ 0.29
LTBR-213ENST00000544454 MYOZ2Q9NPC6 264 aa16.88■□□□□ 0.29
LTBR-213ENST00000544454 JAG2Q9Y219 1238 aa16.88■□□□□ 0.29
LTBR-213ENST00000544454 FPGT-TNNI3KV9GXZ4 949 aa16.88■□□□□ 0.29
LTBR-213ENST00000544454 EGFRP00533 1210 aa16.87■□□□□ 0.29
LTBR-213ENST00000544454 CHAF1AQ13111 956 aaPredicted RBP16.87■□□□□ 0.29
LTBR-213ENST00000544454 KIF4BQ2VIQ3 1234 aa16.87■□□□□ 0.29
LTBR-213ENST00000544454 CNTROBQ8N137 903 aa16.87■□□□□ 0.29
LTBR-213ENST00000544454 WDR66Q8TBY9 1149 aa16.87■□□□□ 0.29
LTBR-213ENST00000544454 DENND2AQ9ULE3 1009 aa16.87■□□□□ 0.29
LTBR-213ENST00000544454 PCDHB15Q9Y5E8 787 aa16.87■□□□□ 0.29
LTBR-213ENST00000544454 MAP1SQ66K74 1059 aaPredicted RBP16.86■□□□□ 0.29
LTBR-213ENST00000544454 RHPN1Q8TCX5 695 aa16.86■□□□□ 0.29
LTBR-213ENST00000544454 KIF1BPQ96EK5 621 aa16.86■□□□□ 0.29
LTBR-213ENST00000544454 SUGT1Q9Y2Z0 365 aa16.86■□□□□ 0.29
LTBR-213ENST00000544454 ITGBL1O95965 494 aaPredicted RBP16.85■□□□□ 0.29
LTBR-213ENST00000544454 EAF2Q96CJ1 260 aaPredicted RBP16.85■□□□□ 0.29
LTBR-213ENST00000544454 DCTPP1Q9H773 170 aa16.85■□□□□ 0.29
LTBR-213ENST00000544454 UQCRFS1P1P0C7P4 283 aa16.84■□□□□ 0.29
LTBR-213ENST00000544454 HSPA6P17066 643 aa16.84■□□□□ 0.29
LTBR-213ENST00000544454 SCARF1Q14162 830 aa16.84■□□□□ 0.29
LTBR-213ENST00000544454 CCDC158Q5M9N0 1113 aa16.84■□□□□ 0.29
LTBR-213ENST00000544454 CLASRPQ8N2M8 674 aaKnown RBP16.84■□□□□ 0.29
LTBR-213ENST00000544454 MTMR14Q8NCE2 650 aa16.84■□□□□ 0.29
LTBR-213ENST00000544454 MRIQ9BWK5 157 aa16.84■□□□□ 0.29
LTBR-213ENST00000544454 TTF2Q9UNY4 1162 aaKnown RBP16.84■□□□□ 0.29
LTBR-213ENST00000544454 PDS5AQ29RF7 1337 aaKnown RBP16.84■□□□□ 0.29
LTBR-213ENST00000544454 PSME4Q14997 1843 aa16.84■□□□□ 0.29
LTBR-213ENST00000544454 F8W031 263 aaPredicted RBP16.83■□□□□ 0.28
LTBR-213ENST00000544454 HDLBPQ00341 1268 aaKnown RBP16.83■□□□□ 0.28
LTBR-213ENST00000544454 RASGRF1Q13972 1273 aa16.83■□□□□ 0.28
LTBR-213ENST00000544454 CDC37L1Q7L3B6 337 aa16.83■□□□□ 0.28
LTBR-213ENST00000544454 ZBED3Q96IU2 234 aaPredicted RBP16.83■□□□□ 0.28
LTBR-213ENST00000544454 ZNF512BQ96KM6 892 aaPredicted RBP16.83■□□□□ 0.28
LTBR-213ENST00000544454 DBNDD2Q9BQY9 259 aa16.83■□□□□ 0.28
LTBR-213ENST00000544454 CCDC8Q9H0W5 538 aaPredicted RBP16.83■□□□□ 0.28
LTBR-213ENST00000544454 SALL1Q9NSC2 1324 aa16.83■□□□□ 0.28
LTBR-213ENST00000544454 SERPINA10Q9UK55 444 aa16.83■□□□□ 0.28
LTBR-213ENST00000544454 ADAMTSL1Q8N6G6 1762 aa16.82■□□□□ 0.28
LTBR-213ENST00000544454 APBB1O00213 710 aa16.82■□□□□ 0.28
LTBR-213ENST00000544454 WNT10BO00744 389 aa16.82■□□□□ 0.28
LTBR-213ENST00000544454 ARID4AP29374 1257 aaPredicted RBP16.82■□□□□ 0.28
LTBR-213ENST00000544454 DLGAP5Q15398 846 aa16.82■□□□□ 0.28
LTBR-213ENST00000544454 NBPF9Q3BBW0 867 aa16.82■□□□□ 0.28
LTBR-213ENST00000544454 AACSQ86V21 672 aa16.82■□□□□ 0.28
LTBR-213ENST00000544454 ZGPATQ8N5A5 531 aaKnown RBP16.82■□□□□ 0.28
LTBR-213ENST00000544454 DCPSQ96C86 337 aaKnown RBP16.82■□□□□ 0.28
LTBR-213ENST00000544454 IL1RAPL2Q9NP60 686 aa16.82■□□□□ 0.28
LTBR-213ENST00000544454 DBNLQ9UJU6 430 aaKnown RBP16.82■□□□□ 0.28
LTBR-213ENST00000544454 PASKQ96RG2 1323 aa16.81■□□□□ 0.28
LTBR-213ENST00000544454 APLP1P51693 650 aa16.81■□□□□ 0.28
LTBR-213ENST00000544454 GRIK5Q16478 980 aa16.81■□□□□ 0.28
LTBR-213ENST00000544454 CFAP100Q494V2 611 aa16.81■□□□□ 0.28
LTBR-213ENST00000544454 TTC39AQ5SRH9 613 aa16.81■□□□□ 0.28
LTBR-213ENST00000544454 SPATA5Q8NB90 893 aa16.81■□□□□ 0.28
LTBR-213ENST00000544454 EXOC6Q8TAG9 804 aa16.81■□□□□ 0.28
LTBR-213ENST00000544454 LRRCC1Q9C099 1032 aa16.81■□□□□ 0.28
LTBR-213ENST00000544454 HMG20BQ9P0W2 317 aa16.81■□□□□ 0.28
LTBR-213ENST00000544454 MAST3O60307 1309 aa16.8■□□□□ 0.28
LTBR-213ENST00000544454 PITPNM2Q9BZ72 1349 aa16.8■□□□□ 0.28
LTBR-213ENST00000544454 HDAC1Q13547 482 aaPredicted RBP16.8■□□□□ 0.28
LTBR-213ENST00000544454 ANGEL2Q5VTE6 544 aaKnown RBP16.8■□□□□ 0.28
LTBR-213ENST00000544454 GGA3Q9NZ52 723 aa16.8■□□□□ 0.28
LTBR-213ENST00000544454 COL1A1P02452 1464 aaPredicted RBP16.8■□□□□ 0.28
LTBR-213ENST00000544454 ZNF646O15015 1829 aaPredicted RBP16.8■□□□□ 0.28
LTBR-213ENST00000544454 ASTN2O75129 1339 aaPredicted RBP16.79■□□□□ 0.28
LTBR-213ENST00000544454 SPDYE2BA6NHP3 402 aa16.79■□□□□ 0.28
LTBR-213ENST00000544454 LDHBP07195 334 aaKnown RBP16.79■□□□□ 0.28
LTBR-213ENST00000544454 IFIT2P09913 472 aaKnown RBP16.79■□□□□ 0.28
LTBR-213ENST00000544454 SPDYE6P0CI01 402 aa16.79■□□□□ 0.28
LTBR-213ENST00000544454 CRKP46108 304 aa16.79■□□□□ 0.28
LTBR-213ENST00000544454 RBM5P52756 815 aaKnown RBP eCLIP16.79■□□□□ 0.283e-10■■■■■ 45.8
Retrieved 100 of 20,778 RNA–protein pairs in 506.7 ms