RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 PGAP2Q9UHJ9 254 aa23.64■■□□□ 1.37
DDX55-211ENST00000544429 SUPT16HQ9Y5B9 1047 aaKnown RBP23.64■■□□□ 1.37
DDX55-211ENST00000544429 EGFRP00533 1210 aa23.63■■□□□ 1.37
DDX55-211ENST00000544429 USP17L8P0C7I0 530 aa23.63■■□□□ 1.37
DDX55-211ENST00000544429 MMP14P50281 582 aa23.63■■□□□ 1.37
DDX55-211ENST00000544429 VPS37DQ86XT2 251 aa23.63■■□□□ 1.37
DDX55-211ENST00000544429 TRPM4Q8TD43 1214 aa23.63■■□□□ 1.37
DDX55-211ENST00000544429 EXOC6BQ9Y2D4 811 aa23.63■■□□□ 1.37
DDX55-211ENST00000544429 CHADLQ6NUI6 762 aa23.62■■□□□ 1.37
DDX55-211ENST00000544429 XAGE2Q96GT9 111 aa23.62■■□□□ 1.37
DDX55-211ENST00000544429 PCDHB15Q9Y5E8 787 aa23.62■■□□□ 1.37
DDX55-211ENST00000544429 PHKA1P46020 1223 aa23.61■■□□□ 1.37
DDX55-211ENST00000544429 EAPPQ56P03 285 aaPredicted RBP23.61■■□□□ 1.37
DDX55-211ENST00000544429 HSP90AB4PQ58FF6 505 aa23.61■■□□□ 1.37
DDX55-211ENST00000544429 TNNI3KQ59H18 835 aa23.61■■□□□ 1.37
DDX55-211ENST00000544429 CCDC102BQ68D86 513 aa23.61■■□□□ 1.37
DDX55-211ENST00000544429 SAMD7Q7Z3H4 446 aa23.61■■□□□ 1.37
DDX55-211ENST00000544429 IQSEC3Q9UPP2 1182 aaPredicted RBP23.61■■□□□ 1.37
DDX55-211ENST00000544429 FPGT-TNNI3KV9GXZ4 949 aa23.61■■□□□ 1.37
DDX55-211ENST00000544429 SEMA3EO15041 775 aa23.6■■□□□ 1.37
DDX55-211ENST00000544429 OS9Q13438 667 aaPredicted RBP23.6■■□□□ 1.37
DDX55-211ENST00000544429 ERC1Q8IUD2 1116 aa23.6■■□□□ 1.37
DDX55-211ENST00000544429 ZC3H15Q8WU90 426 aaKnown RBP23.6■■□□□ 1.37
DDX55-211ENST00000544429 FBXW7Q969H0 707 aa23.6■■□□□ 1.37
DDX55-211ENST00000544429 POLR2AP24928 1970 aaKnown RBP23.6■■□□□ 1.37
DDX55-211ENST00000544429 AAMPQ13685 434 aa23.59■■□□□ 1.37
DDX55-211ENST00000544429 JAG2Q9Y219 1238 aa23.59■■□□□ 1.37
DDX55-211ENST00000544429 AKAP11Q9UKA4 1901 aa23.59■■□□□ 1.37
DDX55-211ENST00000544429 PDS5AQ29RF7 1337 aaKnown RBP23.59■■□□□ 1.37
DDX55-211ENST00000544429 ITGBL1O95965 494 aaPredicted RBP23.58■■□□□ 1.37
DDX55-211ENST00000544429 TBC1D10BQ4KMP7 808 aaPredicted RBP23.58■■□□□ 1.37
DDX55-211ENST00000544429 MFSD14BQ5SR56 506 aa23.58■■□□□ 1.37
DDX55-211ENST00000544429 KIAA0825Q8IV33 1275 aa23.58■■□□□ 1.37
DDX55-211ENST00000544429 RHPN1Q8TCX5 695 aa23.58■■□□□ 1.37
DDX55-211ENST00000544429 EAF2Q96CJ1 260 aaPredicted RBP23.58■■□□□ 1.37
DDX55-211ENST00000544429 MYOZ2Q9NPC6 264 aa23.58■■□□□ 1.37
DDX55-211ENST00000544429 ECM29Q5VYK3 1845 aa23.57■■□□□ 1.36
DDX55-211ENST00000544429 KIF4BQ2VIQ3 1234 aa23.57■■□□□ 1.36
DDX55-211ENST00000544429 TBC1D22AQ8WUA7 517 aa23.57■■□□□ 1.36
DDX55-211ENST00000544429 ZBED3Q96IU2 234 aaPredicted RBP23.57■■□□□ 1.36
DDX55-211ENST00000544429 RAB11FIP3O75154 756 aa23.56■■□□□ 1.36
DDX55-211ENST00000544429 ARID4AP29374 1257 aaPredicted RBP23.56■■□□□ 1.36
DDX55-211ENST00000544429 GRIK5Q16478 980 aa23.56■■□□□ 1.36
DDX55-211ENST00000544429 OGFOD1Q8N543 542 aa23.56■■□□□ 1.36
DDX55-211ENST00000544429 MTMR14Q8NCE2 650 aa23.56■■□□□ 1.36
DDX55-211ENST00000544429 KIF1BPQ96EK5 621 aa23.56■■□□□ 1.36
DDX55-211ENST00000544429 NEUROD6Q96NK8 337 aa23.56■■□□□ 1.36
DDX55-211ENST00000544429 GNL3LQ9NVN8 582 aaKnown RBP23.56■■□□□ 1.36
DDX55-211ENST00000544429 DBNLQ9UJU6 430 aaKnown RBP23.56■■□□□ 1.36
DDX55-211ENST00000544429 PASKQ96RG2 1323 aa23.56■■□□□ 1.36
DDX55-211ENST00000544429 SALL1Q9NSC2 1324 aa23.56■■□□□ 1.36
DDX55-211ENST00000544429 RASGRF1Q13972 1273 aa23.55■■□□□ 1.36
DDX55-211ENST00000544429 MAP1SQ66K74 1059 aaPredicted RBP23.55■■□□□ 1.36
DDX55-211ENST00000544429 DCTPP1Q9H773 170 aa23.55■■□□□ 1.36
DDX55-211ENST00000544429 DENND2AQ9ULE3 1009 aa23.55■■□□□ 1.36
DDX55-211ENST00000544429 SUGT1Q9Y2Z0 365 aa23.55■■□□□ 1.36
DDX55-211ENST00000544429 FRAT2O75474 233 aaPredicted RBP23.54■■□□□ 1.36
DDX55-211ENST00000544429 CHAF1AQ13111 956 aaPredicted RBP23.54■■□□□ 1.36
DDX55-211ENST00000544429 CNTROBQ8N137 903 aa23.54■■□□□ 1.36
DDX55-211ENST00000544429 WDR66Q8TBY9 1149 aa23.54■■□□□ 1.36
DDX55-211ENST00000544429 ZNF512BQ96KM6 892 aaPredicted RBP23.54■■□□□ 1.36
DDX55-211ENST00000544429 DBNDD2Q9BQY9 259 aa23.54■■□□□ 1.36
DDX55-211ENST00000544429 CLEC11AQ9Y240 323 aa23.54■■□□□ 1.36
DDX55-211ENST00000544429 TLR7Q9NYK1 1049 aaKnown RBP23.53■■□□□ 1.36
DDX55-211ENST00000544429 HDAC9Q9UKV0 1011 aa23.53■■□□□ 1.36
DDX55-211ENST00000544429 WNT10BO00744 389 aa23.52■■□□□ 1.36
DDX55-211ENST00000544429 RBM26Q5T8P6 1007 aaKnown RBP23.52■■□□□ 1.36
DDX55-211ENST00000544429 EXOC6Q8TAG9 804 aa23.52■■□□□ 1.36
DDX55-211ENST00000544429 ASTN2O75129 1339 aaPredicted RBP23.52■■□□□ 1.36
DDX55-211ENST00000544429 TRPM7Q96QT4 1865 aa23.51■■□□□ 1.35
DDX55-211ENST00000544429 HSPA6P17066 643 aa23.51■■□□□ 1.35
DDX55-211ENST00000544429 SCARF1Q14162 830 aa23.51■■□□□ 1.35
DDX55-211ENST00000544429 NBPF9Q3BBW0 867 aa23.51■■□□□ 1.35
DDX55-211ENST00000544429 MRIQ9BWK5 157 aa23.51■■□□□ 1.35
DDX55-211ENST00000544429 IL1RAPL2Q9NP60 686 aa23.51■■□□□ 1.35
DDX55-211ENST00000544429 HMG20BQ9P0W2 317 aa23.51■■□□□ 1.35
DDX55-211ENST00000544429 SERPINA10Q9UK55 444 aa23.51■■□□□ 1.35
DDX55-211ENST00000544429 TTF2Q9UNY4 1162 aaKnown RBP23.51■■□□□ 1.35
DDX55-211ENST00000544429 MCAMP43121 646 aa23.5■■□□□ 1.35
DDX55-211ENST00000544429 HDLBPQ00341 1268 aaKnown RBP23.5■■□□□ 1.35
DDX55-211ENST00000544429 HDAC1Q13547 482 aaPredicted RBP23.5■■□□□ 1.35
DDX55-211ENST00000544429 CCDC8Q9H0W5 538 aaPredicted RBP23.5■■□□□ 1.35
DDX55-211ENST00000544429 PITPNM2Q9BZ72 1349 aa23.5■■□□□ 1.35
DDX55-211ENST00000544429 F8W031 263 aaPredicted RBP23.49■■□□□ 1.35
DDX55-211ENST00000544429 UQCRFS1P1P0C7P4 283 aa23.49■■□□□ 1.35
DDX55-211ENST00000544429 GORABQ5T7V8 394 aa23.49■■□□□ 1.35
DDX55-211ENST00000544429 AACSQ86V21 672 aa23.49■■□□□ 1.35
DDX55-211ENST00000544429 CLASRPQ8N2M8 674 aaKnown RBP23.49■■□□□ 1.35
DDX55-211ENST00000544429 PCDHAC2Q9Y5I4 1007 aa23.49■■□□□ 1.35
DDX55-211ENST00000544429 SPDYE2BA6NHP3 402 aa23.48■■□□□ 1.35
DDX55-211ENST00000544429 SPDYE6P0CI01 402 aa23.48■■□□□ 1.35
DDX55-211ENST00000544429 CFAP100Q494V2 611 aa23.48■■□□□ 1.35
DDX55-211ENST00000544429 CCDC158Q5M9N0 1113 aa23.48■■□□□ 1.35
DDX55-211ENST00000544429 PI16Q6UXB8 463 aa23.48■■□□□ 1.35
DDX55-211ENST00000544429 SPATA5Q8NB90 893 aa23.48■■□□□ 1.35
DDX55-211ENST00000544429 LRRCC1Q9C099 1032 aa23.48■■□□□ 1.35
DDX55-211ENST00000544429 GGA3Q9NZ52 723 aa23.48■■□□□ 1.35
DDX55-211ENST00000544429 APBB1O00213 710 aa23.47■■□□□ 1.35
DDX55-211ENST00000544429 PRDX5P30044 214 aa23.47■■□□□ 1.35
DDX55-211ENST00000544429 CDC37L1Q7L3B6 337 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms