RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 FMR1Q06787 632 aaKnown RBP eCLIP12.18□□□□□ -0.46
TNFRSF1A-214ENST00000543048 KIF4BQ2VIQ3 1234 aa12.18□□□□□ -0.46
TNFRSF1A-214ENST00000543048 DEFB115Q30KQ5 88 aa12.18□□□□□ -0.46
TNFRSF1A-214ENST00000543048 LRRC24Q50LG9 513 aa12.18□□□□□ -0.46
TNFRSF1A-214ENST00000543048 CST9Q5W186 159 aa12.18□□□□□ -0.46
TNFRSF1A-214ENST00000543048 ATF7IPQ6VMQ6 1270 aa12.18□□□□□ -0.46
TNFRSF1A-214ENST00000543048 ZNF804AQ7Z570 1209 aa12.18□□□□□ -0.46
TNFRSF1A-214ENST00000543048 OGFOD1Q8N543 542 aa12.18□□□□□ -0.46
TNFRSF1A-214ENST00000543048 FRAT1Q92837 279 aaPredicted RBP12.18□□□□□ -0.46
TNFRSF1A-214ENST00000543048 DCPSQ96C86 337 aaKnown RBP12.18□□□□□ -0.46
TNFRSF1A-214ENST00000543048 GABBR2O75899 941 aa12.17□□□□□ -0.46
TNFRSF1A-214ENST00000543048 SCARF1Q14162 830 aa12.17□□□□□ -0.46
TNFRSF1A-214ENST00000543048 METTL24Q5JXM2 366 aa12.17□□□□□ -0.46
TNFRSF1A-214ENST00000543048 KLHDC4Q8TBB5 520 aa12.17□□□□□ -0.46
TNFRSF1A-214ENST00000543048 MXD3Q9BW11 206 aa12.17□□□□□ -0.46
TNFRSF1A-214ENST00000543048 MYOZ2Q9NPC6 264 aa12.17□□□□□ -0.46
TNFRSF1A-214ENST00000543048 ABT1Q9ULW3 272 aaKnown RBP12.17□□□□□ -0.46
TNFRSF1A-214ENST00000543048 RASSF10A6NK89 507 aa12.16□□□□□ -0.46
TNFRSF1A-214ENST00000543048 SASH1O94885 1247 aa12.16□□□□□ -0.46
TNFRSF1A-214ENST00000543048 PDE8BO95263 885 aa12.16□□□□□ -0.46
TNFRSF1A-214ENST00000543048 CELF2O95319 508 aaKnown RBP12.16□□□□□ -0.46
TNFRSF1A-214ENST00000543048 GNAI3P08754 354 aa12.16□□□□□ -0.46
TNFRSF1A-214ENST00000543048 TRIM27P14373 513 aa12.16□□□□□ -0.46
TNFRSF1A-214ENST00000543048 HIBADHP31937 336 aaKnown RBP12.16□□□□□ -0.46
TNFRSF1A-214ENST00000543048 RFX5P48382 616 aaPredicted RBP12.16□□□□□ -0.46
TNFRSF1A-214ENST00000543048 ZKSCAN2Q63HK3 967 aa12.16□□□□□ -0.46
TNFRSF1A-214ENST00000543048 KRT26Q7Z3Y9 468 aa12.16□□□□□ -0.46
TNFRSF1A-214ENST00000543048 FAM84BQ96KN1 310 aaPredicted RBP12.16□□□□□ -0.46
TNFRSF1A-214ENST00000543048 HDAC9Q9UKV0 1011 aa12.16□□□□□ -0.46
TNFRSF1A-214ENST00000543048 LRRFIP2Q9Y608 721 aaKnown RBP12.16□□□□□ -0.46
TNFRSF1A-214ENST00000543048 CNTNAP1P78357 1384 aa12.16□□□□□ -0.46
TNFRSF1A-214ENST00000543048 EYA2O00167 538 aa12.15□□□□□ -0.46
TNFRSF1A-214ENST00000543048 VEGFBP49765 207 aa12.15□□□□□ -0.46
TNFRSF1A-214ENST00000543048 FKBP1AP62942 108 aaKnown RBP12.15□□□□□ -0.46
TNFRSF1A-214ENST00000543048 PTPN12Q05209 780 aaKnown RBP12.15□□□□□ -0.46
TNFRSF1A-214ENST00000543048 MEIS3Q99687 375 aa12.15□□□□□ -0.46
TNFRSF1A-214ENST00000543048 GYG1P46976 350 aa12.14□□□□□ -0.47
TNFRSF1A-214ENST00000543048 ANGEL2Q5VTE6 544 aaKnown RBP12.14□□□□□ -0.47
TNFRSF1A-214ENST00000543048 FBXO33Q7Z6M2 555 aa12.14□□□□□ -0.47
TNFRSF1A-214ENST00000543048 VPS37DQ86XT2 251 aa12.14□□□□□ -0.47
TNFRSF1A-214ENST00000543048 KIAA0825Q8IV33 1275 aa12.14□□□□□ -0.47
TNFRSF1A-214ENST00000543048 SULF1Q8IWU6 871 aa12.14□□□□□ -0.47
TNFRSF1A-214ENST00000543048 VGLL2Q8N8G2 317 aa12.14□□□□□ -0.47
TNFRSF1A-214ENST00000543048 TDRD7Q8NHU6 1098 aaKnown RBP12.14□□□□□ -0.47
TNFRSF1A-214ENST00000543048 CLUAP1Q96AJ1 413 aa12.14□□□□□ -0.47
TNFRSF1A-214ENST00000543048 TLL2Q9Y6L7 1015 aa12.14□□□□□ -0.47
TNFRSF1A-214ENST00000543048 ASTN2O75129 1339 aaPredicted RBP12.13□□□□□ -0.47
TNFRSF1A-214ENST00000543048 FAM205AQ6ZU69 1335 aa12.13□□□□□ -0.47
TNFRSF1A-214ENST00000543048 MYH13Q9UKX3 1938 aa12.13□□□□□ -0.47
TNFRSF1A-214ENST00000543048 CIAO1O76071 339 aa12.13□□□□□ -0.47
TNFRSF1A-214ENST00000543048 NBPF9Q3BBW0 867 aa12.13□□□□□ -0.47
TNFRSF1A-214ENST00000543048 CAVIN4Q5BKX8 364 aa12.13□□□□□ -0.47
TNFRSF1A-214ENST00000543048 DLK2Q6UY11 383 aa12.13□□□□□ -0.47
TNFRSF1A-214ENST00000543048 ZNF408Q9H9D4 720 aa12.13□□□□□ -0.47
TNFRSF1A-214ENST00000543048 GGA3Q9NZ52 723 aa12.13□□□□□ -0.47
TNFRSF1A-214ENST00000543048 TNNQ9UQP3 1299 aa12.13□□□□□ -0.47
TNFRSF1A-214ENST00000543048 ECM29Q5VYK3 1845 aa12.13□□□□□ -0.47
TNFRSF1A-214ENST00000543048 PITPNM2Q9BZ72 1349 aa12.12□□□□□ -0.47
TNFRSF1A-214ENST00000543048 WDR33Q9C0J8 1336 aaKnown RBP12.12□□□□□ -0.47
TNFRSF1A-214ENST00000543048 ADM5C9JUS6 153 aa12.12□□□□□ -0.47
TNFRSF1A-214ENST00000543048 WNT10BO00744 389 aa12.12□□□□□ -0.47
TNFRSF1A-214ENST00000543048 GNAI2P04899 355 aa12.12□□□□□ -0.47
TNFRSF1A-214ENST00000543048 IFIT1P09914 478 aaKnown RBP12.12□□□□□ -0.47
TNFRSF1A-214ENST00000543048 FGFR2P21802 821 aa12.12□□□□□ -0.47
TNFRSF1A-214ENST00000543048 ECE1P42892 770 aa12.12□□□□□ -0.47
TNFRSF1A-214ENST00000543048 PUM3Q15397 648 aaKnown RBP12.12□□□□□ -0.47
TNFRSF1A-214ENST00000543048 ATG9AQ7Z3C6 839 aa12.12□□□□□ -0.47
TNFRSF1A-214ENST00000543048 SAPCD2Q86UD0 394 aa12.12□□□□□ -0.47
TNFRSF1A-214ENST00000543048 CERS5Q8N5B7 392 aa12.12□□□□□ -0.47
TNFRSF1A-214ENST00000543048 TMEM57Q8N5G2 664 aa12.12□□□□□ -0.47
TNFRSF1A-214ENST00000543048 C2orf69Q8N8R5 385 aa12.12□□□□□ -0.47
TNFRSF1A-214ENST00000543048 COPRSQ9NQ92 184 aa12.12□□□□□ -0.47
TNFRSF1A-214ENST00000543048 CEP126Q9P2H0 1117 aa12.12□□□□□ -0.47
TNFRSF1A-214ENST00000543048 FRAT2O75474 233 aaPredicted RBP12.11□□□□□ -0.47
TNFRSF1A-214ENST00000543048 IL15P40933 162 aaPredicted RBP12.11□□□□□ -0.47
TNFRSF1A-214ENST00000543048 DLGAP5Q15398 846 aa12.11□□□□□ -0.47
TNFRSF1A-214ENST00000543048 PAXIP1Q6ZW49 1069 aaPredicted RBP12.11□□□□□ -0.47
TNFRSF1A-214ENST00000543048 DZIP1LQ8IYY4 767 aaKnown RBP12.11□□□□□ -0.47
TNFRSF1A-214ENST00000543048 MTMR14Q8NCE2 650 aa12.11□□□□□ -0.47
TNFRSF1A-214ENST00000543048 LPIN2Q92539 896 aa12.11□□□□□ -0.47
TNFRSF1A-214ENST00000543048 ZBED3Q96IU2 234 aaPredicted RBP12.11□□□□□ -0.47
TNFRSF1A-214ENST00000543048 HHIPL1Q96JK4 782 aa12.11□□□□□ -0.47
TNFRSF1A-214ENST00000543048 SIL1Q9H173 461 aa12.11□□□□□ -0.47
TNFRSF1A-214ENST00000543048 JAG2Q9Y219 1238 aa12.11□□□□□ -0.47
TNFRSF1A-214ENST00000543048 F8W031 263 aaPredicted RBP12.1□□□□□ -0.47
TNFRSF1A-214ENST00000543048 SRGAP3O43295 1099 aa12.1□□□□□ -0.47
TNFRSF1A-214ENST00000543048 SLC5A1P13866 664 aa12.1□□□□□ -0.47
TNFRSF1A-214ENST00000543048 BCAMP50895 628 aa12.1□□□□□ -0.47
TNFRSF1A-214ENST00000543048 CLCN6P51797 869 aa12.1□□□□□ -0.47
TNFRSF1A-214ENST00000543048 MTX1Q13505 466 aa12.1□□□□□ -0.47
TNFRSF1A-214ENST00000543048 MFSD14BQ5SR56 506 aa12.1□□□□□ -0.47
TNFRSF1A-214ENST00000543048 CYP4F22Q6NT55 531 aa12.1□□□□□ -0.47
TNFRSF1A-214ENST00000543048 CDCA5Q96FF9 252 aa12.1□□□□□ -0.47
TNFRSF1A-214ENST00000543048 CAPNS2Q96L46 248 aa12.1□□□□□ -0.47
TNFRSF1A-214ENST00000543048 GBA2Q9HCG7 927 aaPredicted RBP12.1□□□□□ -0.47
TNFRSF1A-214ENST00000543048 PA2G4Q9UQ80 394 aaKnown RBP12.1□□□□□ -0.47
TNFRSF1A-214ENST00000543048 HSPA1AP0DMV8 641 aaKnown RBP12.09□□□□□ -0.47
TNFRSF1A-214ENST00000543048 HSPA1BP0DMV9 641 aaKnown RBP12.09□□□□□ -0.47
TNFRSF1A-214ENST00000543048 HUNKP57058 714 aa12.09□□□□□ -0.47
TNFRSF1A-214ENST00000543048 CFAP100Q494V2 611 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms