RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 SCARF1Q14162 830 aa7.17□□□□□ -1.26
ABCF1-207ENST00000542772 DOK7Q18PE1 504 aa7.17□□□□□ -1.26
ABCF1-207ENST00000542772 TTC39AQ5SRH9 613 aa7.17□□□□□ -1.26
ABCF1-207ENST00000542772 TTLL5Q6EMB2 1281 aa7.17□□□□□ -1.26
ABCF1-207ENST00000542772 LARGE2Q8N3Y3 721 aa7.17□□□□□ -1.26
ABCF1-207ENST00000542772 SPATA5Q8NB90 893 aa7.17□□□□□ -1.26
ABCF1-207ENST00000542772 WDR66Q8TBY9 1149 aa7.17□□□□□ -1.26
ABCF1-207ENST00000542772 JDP2Q8WYK2 163 aa7.17□□□□□ -1.26
ABCF1-207ENST00000542772 HAUS7Q99871 368 aa7.17□□□□□ -1.26
ABCF1-207ENST00000542772 SUGT1Q9Y2Z0 365 aa7.17□□□□□ -1.26
ABCF1-207ENST00000542772 PSME4Q14997 1843 aa7.16□□□□□ -1.26
ABCF1-207ENST00000542772 USP17L3A6NCW0 530 aa7.16□□□□□ -1.26
ABCF1-207ENST00000542772 USP17L4A6NCW7 530 aa7.16□□□□□ -1.26
ABCF1-207ENST00000542772 DCAF8L1A6NGE4 600 aa7.16□□□□□ -1.26
ABCF1-207ENST00000542772 ZAP70P43403 619 aa7.16□□□□□ -1.26
ABCF1-207ENST00000542772 RASGRF1Q13972 1273 aa7.16□□□□□ -1.26
ABCF1-207ENST00000542772 DACT2Q5SW24 774 aa7.16□□□□□ -1.26
ABCF1-207ENST00000542772 TMED8Q6PL24 325 aaPredicted RBP7.16□□□□□ -1.26
ABCF1-207ENST00000542772 USP17L1Q7RTZ2 530 aa7.16□□□□□ -1.26
ABCF1-207ENST00000542772 VPS37DQ86XT2 251 aa7.16□□□□□ -1.26
ABCF1-207ENST00000542772 PELP1Q8IZL8 1130 aaKnown RBP7.16□□□□□ -1.26
ABCF1-207ENST00000542772 GPATCH3Q96I76 525 aa7.16□□□□□ -1.26
ABCF1-207ENST00000542772 GMLQ99445 158 aa7.16□□□□□ -1.26
ABCF1-207ENST00000542772 BOLA2Q9H3K6 86 aa7.16□□□□□ -1.26
ABCF1-207ENST00000542772 DBNDD1Q9H9R9 158 aa7.16□□□□□ -1.26
ABCF1-207ENST00000542772 ZC3H4Q9UPT8 1303 aaKnown RBP7.16□□□□□ -1.26
ABCF1-207ENST00000542772 ZNF646O15015 1829 aaPredicted RBP7.15□□□□□ -1.26
ABCF1-207ENST00000542772 SCN9AQ15858 1988 aa7.15□□□□□ -1.26
ABCF1-207ENST00000542772 G3V3G9 751 aa7.15□□□□□ -1.26
ABCF1-207ENST00000542772 GTF2IP78347 998 aa7.15□□□□□ -1.26
ABCF1-207ENST00000542772 HDLBPQ00341 1268 aaKnown RBP7.15□□□□□ -1.26
ABCF1-207ENST00000542772 TNIP1Q15025 636 aa7.15□□□□□ -1.26
ABCF1-207ENST00000542772 TTF1Q15361 905 aaPredicted RBP7.15□□□□□ -1.26
ABCF1-207ENST00000542772 TTC22Q5TAA0 569 aa7.15□□□□□ -1.26
ABCF1-207ENST00000542772 DCAF8Q5TAQ9 597 aa7.15□□□□□ -1.26
ABCF1-207ENST00000542772 C9orf131Q5VYM1 1079 aa7.15□□□□□ -1.26
ABCF1-207ENST00000542772 CIAPIN1Q6FI81 312 aa7.15□□□□□ -1.26
ABCF1-207ENST00000542772 NIM1KQ8IY84 436 aa7.15□□□□□ -1.26
ABCF1-207ENST00000542772 ZGPATQ8N5A5 531 aaKnown RBP7.15□□□□□ -1.26
ABCF1-207ENST00000542772 AGBL3Q8NEM8 1001 aa7.15□□□□□ -1.26
ABCF1-207ENST00000542772 TBC1D22AQ8WUA7 517 aa7.15□□□□□ -1.26
ABCF1-207ENST00000542772 DPF2Q92785 391 aa7.15□□□□□ -1.26
ABCF1-207ENST00000542772 FAM163AQ96GL9 167 aaPredicted RBP7.15□□□□□ -1.26
ABCF1-207ENST00000542772 PAG1Q9NWQ8 432 aa7.15□□□□□ -1.26
ABCF1-207ENST00000542772 PSMD14O00487 310 aa7.14□□□□□ -1.27
ABCF1-207ENST00000542772 FRAT2O75474 233 aaPredicted RBP7.14□□□□□ -1.27
ABCF1-207ENST00000542772 GSPT1P15170 499 aaKnown RBP7.14□□□□□ -1.27
ABCF1-207ENST00000542772 EIF6P56537 245 aaKnown RBP7.14□□□□□ -1.27
ABCF1-207ENST00000542772 BMP2KLQ5H9B9 411 aa7.14□□□□□ -1.27
ABCF1-207ENST00000542772 SPTY2D1Q68D10 685 aaPredicted RBP7.14□□□□□ -1.27
ABCF1-207ENST00000542772 RSBN1LQ6PCB5 846 aaPredicted RBP7.14□□□□□ -1.27
ABCF1-207ENST00000542772 PI16Q6UXB8 463 aa7.14□□□□□ -1.27
ABCF1-207ENST00000542772 SKAP1Q86WV1 359 aa7.14□□□□□ -1.27
ABCF1-207ENST00000542772 GPC2Q8N158 579 aa7.14□□□□□ -1.27
ABCF1-207ENST00000542772 CERS5Q8N5B7 392 aa7.14□□□□□ -1.27
ABCF1-207ENST00000542772 KBTBD3Q8NAB2 608 aa7.14□□□□□ -1.27
ABCF1-207ENST00000542772 MYO3BQ8WXR4 1341 aa7.14□□□□□ -1.27
ABCF1-207ENST00000542772 EVI5LQ96CN4 794 aa7.14□□□□□ -1.27
ABCF1-207ENST00000542772 ANTXR1Q9H6X2 564 aa7.14□□□□□ -1.27
ABCF1-207ENST00000542772 SNRKQ9NRH2 765 aa7.14□□□□□ -1.27
ABCF1-207ENST00000542772 RNF181Q9P0P0 153 aa7.14□□□□□ -1.27
ABCF1-207ENST00000542772 IQSEC3Q9UPP2 1182 aaPredicted RBP7.14□□□□□ -1.27
ABCF1-207ENST00000542772 COL1A1P02452 1464 aaPredicted RBP7.13□□□□□ -1.27
ABCF1-207ENST00000542772 GLTPD2A6NH11 291 aa7.13□□□□□ -1.27
ABCF1-207ENST00000542772 RAD17O75943 681 aa7.13□□□□□ -1.27
ABCF1-207ENST00000542772 SDSP20132 328 aa7.13□□□□□ -1.27
ABCF1-207ENST00000542772 RPS12P25398 132 aaKnown RBP7.13□□□□□ -1.27
ABCF1-207ENST00000542772 GRIK5Q16478 980 aa7.13□□□□□ -1.27
ABCF1-207ENST00000542772 TSHZ3Q63HK5 1081 aa7.13□□□□□ -1.27
ABCF1-207ENST00000542772 DPY19L2Q6NUT2 758 aa7.13□□□□□ -1.27
ABCF1-207ENST00000542772 HHIPL2Q6UWX4 724 aa7.13□□□□□ -1.27
ABCF1-207ENST00000542772 TBC1D9Q6ZT07 1266 aa7.13□□□□□ -1.27
ABCF1-207ENST00000542772 ERICH6Q7L0X2 663 aa7.13□□□□□ -1.27
ABCF1-207ENST00000542772 MTMR14Q8NCE2 650 aa7.13□□□□□ -1.27
ABCF1-207ENST00000542772 ZNF384Q8TF68 577 aa7.13□□□□□ -1.27
ABCF1-207ENST00000542772 NSUN4Q96CB9 384 aaKnown RBP7.13□□□□□ -1.27
ABCF1-207ENST00000542772 EDC3Q96F86 508 aaKnown RBP7.13□□□□□ -1.27
ABCF1-207ENST00000542772 PIH1D3Q9NQM4 214 aaKnown RBP7.13□□□□□ -1.27
ABCF1-207ENST00000542772 NDUFB9Q9Y6M9 179 aa7.13□□□□□ -1.27
ABCF1-207ENST00000542772 MYH13Q9UKX3 1938 aa7.13□□□□□ -1.27
ABCF1-207ENST00000542772 MYO5AQ9Y4I1 1855 aaKnown RBP7.13□□□□□ -1.27
ABCF1-207ENST00000542772 TCRBV5S4A2TA0A5A2 114 aa7.12□□□□□ -1.27
ABCF1-207ENST00000542772 POTECB2RU33 542 aa7.12□□□□□ -1.27
ABCF1-207ENST00000542772 GOLIM4O00461 696 aa7.12□□□□□ -1.27
ABCF1-207ENST00000542772 DDNO94850 711 aaPredicted RBP7.12□□□□□ -1.27
ABCF1-207ENST00000542772 LDHBP07195 334 aaKnown RBP7.12□□□□□ -1.27
ABCF1-207ENST00000542772 ZFYP08048 801 aaPredicted RBP7.12□□□□□ -1.27
ABCF1-207ENST00000542772 PRDX5P30044 214 aa7.12□□□□□ -1.27
ABCF1-207ENST00000542772 ADD2P35612 726 aa7.12□□□□□ -1.27
ABCF1-207ENST00000542772 RGS3P49796 1198 aa7.12□□□□□ -1.27
ABCF1-207ENST00000542772 ZNF280AP59817 542 aaPredicted RBP7.12□□□□□ -1.27
ABCF1-207ENST00000542772 PPP4CP60510 307 aa7.12□□□□□ -1.27
ABCF1-207ENST00000542772 MAP3K12Q12852 859 aa7.12□□□□□ -1.27
ABCF1-207ENST00000542772 UBE3CQ15386 1083 aa7.12□□□□□ -1.27
ABCF1-207ENST00000542772 MFSD14BQ5SR56 506 aa7.12□□□□□ -1.27
ABCF1-207ENST00000542772 ZSCAN25Q6NSZ9 544 aa7.12□□□□□ -1.27
ABCF1-207ENST00000542772 CNTROBQ8N137 903 aa7.12□□□□□ -1.27
ABCF1-207ENST00000542772 ZBED3Q96IU2 234 aaPredicted RBP7.12□□□□□ -1.27
ABCF1-207ENST00000542772 L3MBTL3Q96JM7 780 aaPredicted RBP7.12□□□□□ -1.27
ABCF1-207ENST00000542772 DNAJC2Q99543 621 aaKnown RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms