RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 ZNF330Q9Y3S2 320 aaPredicted RBP3.46□□□□□ -1.86
TRAV1-1-201ENST00000542354 PARP3Q9Y6F1 533 aa3.46□□□□□ -1.86
TRAV1-1-201ENST00000542354 KNDC1Q76NI1 1749 aa3.46□□□□□ -1.86
TRAV1-1-201ENST00000542354 GPR179Q6PRD1 2367 aa3.46□□□□□ -1.86
TRAV1-1-201ENST00000542354 EYSQ5T1H1 3165 aa3.45□□□□□ -1.86
TRAV1-1-201ENST00000542354 ZNF318Q5VUA4 2279 aa3.45□□□□□ -1.86
TRAV1-1-201ENST00000542354 KIF13BQ9NQT8 1826 aa3.45□□□□□ -1.86
TRAV1-1-201ENST00000542354 SPTBN4Q9H254 2564 aa3.45□□□□□ -1.86
TRAV1-1-201ENST00000542354 TRIM66O15016 1216 aa3.45□□□□□ -1.86
TRAV1-1-201ENST00000542354 PER1O15534 1290 aaPredicted RBP3.45□□□□□ -1.86
TRAV1-1-201ENST00000542354 CELF2O95319 508 aaKnown RBP3.45□□□□□ -1.86
TRAV1-1-201ENST00000542354 SSFA2P28290 1259 aa3.45□□□□□ -1.86
TRAV1-1-201ENST00000542354 GSK3AP49840 483 aa3.45□□□□□ -1.86
TRAV1-1-201ENST00000542354 TMF1P82094 1093 aa3.45□□□□□ -1.86
TRAV1-1-201ENST00000542354 KRT76Q01546 638 aa3.45□□□□□ -1.86
TRAV1-1-201ENST00000542354 TMEM31Q5JXX7 168 aa3.45□□□□□ -1.86
TRAV1-1-201ENST00000542354 NUTM2GQ5VZR2 741 aa3.45□□□□□ -1.86
TRAV1-1-201ENST00000542354 FAM109BQ6ICB4 259 aaPredicted RBP3.45□□□□□ -1.86
TRAV1-1-201ENST00000542354 GPR161Q8N6U8 529 aaKnown RBP3.45□□□□□ -1.86
TRAV1-1-201ENST00000542354 ANKRD24Q8TF21 1146 aa3.45□□□□□ -1.86
TRAV1-1-201ENST00000542354 NLRP3Q96P20 1036 aa3.45□□□□□ -1.86
TRAV1-1-201ENST00000542354 INSM2Q96T92 566 aaPredicted RBP3.45□□□□□ -1.86
TRAV1-1-201ENST00000542354 STK26Q9P289 416 aa3.45□□□□□ -1.86
TRAV1-1-201ENST00000542354 MKL2Q9ULH7 1088 aa3.45□□□□□ -1.86
TRAV1-1-201ENST00000542354 CHD6Q8TD26 2715 aa3.45□□□□□ -1.86
TRAV1-1-201ENST00000542354 WDR17Q8IZU2 1322 aa3.44□□□□□ -1.86
TRAV1-1-201ENST00000542354 IRS2Q9Y4H2 1338 aa3.44□□□□□ -1.86
TRAV1-1-201ENST00000542354 NSD3Q9BZ95 1437 aa3.44□□□□□ -1.86
TRAV1-1-201ENST00000542354 SCN4AP35499 1836 aa3.44□□□□□ -1.86
TRAV1-1-201ENST00000542354 PRUNE2Q8WUY3 3088 aa3.44□□□□□ -1.86
TRAV1-1-201ENST00000542354 ALS2Q96Q42 1657 aa3.44□□□□□ -1.86
TRAV1-1-201ENST00000542354 ZBTB7CA1YPR0 619 aa3.44□□□□□ -1.86
TRAV1-1-201ENST00000542354 NFKBIEO00221 500 aa3.44□□□□□ -1.86
TRAV1-1-201ENST00000542354 TRAF5O00463 557 aa3.44□□□□□ -1.86
TRAV1-1-201ENST00000542354 ADAM23O75077 832 aa3.44□□□□□ -1.86
TRAV1-1-201ENST00000542354 GCP02774 474 aa3.44□□□□□ -1.86
TRAV1-1-201ENST00000542354 CELA2BP08218 269 aaPredicted RBP3.44□□□□□ -1.86
TRAV1-1-201ENST00000542354 CSB-PGBD3P0DP91 1061 aa3.44□□□□□ -1.86
TRAV1-1-201ENST00000542354 CHRNA5P30532 468 aa3.44□□□□□ -1.86
TRAV1-1-201ENST00000542354 PTGIRP43119 386 aa3.44□□□□□ -1.86
TRAV1-1-201ENST00000542354 CTSOP43234 321 aaPredicted RBP3.44□□□□□ -1.86
TRAV1-1-201ENST00000542354 RNF144AP50876 292 aaPredicted RBP3.44□□□□□ -1.86
TRAV1-1-201ENST00000542354 CBLBQ13191 982 aa3.44□□□□□ -1.86
TRAV1-1-201ENST00000542354 WDR44Q5JSH3 913 aa3.44□□□□□ -1.86
TRAV1-1-201ENST00000542354 INTS6LQ5JSJ4 861 aaKnown RBP3.44□□□□□ -1.86
TRAV1-1-201ENST00000542354 BICDL1Q6ZP65 573 aa3.44□□□□□ -1.86
TRAV1-1-201ENST00000542354 GUCD1Q96NT3 240 aa3.44□□□□□ -1.86
TRAV1-1-201ENST00000542354 HTATIP2Q9BUP3 242 aa3.44□□□□□ -1.86
TRAV1-1-201ENST00000542354 STAP2Q9UGK3 403 aa3.44□□□□□ -1.86
TRAV1-1-201ENST00000542354 DYRK1BQ9Y463 629 aa3.44□□□□□ -1.86
TRAV1-1-201ENST00000542354 KIAA1551Q9HCM1 1747 aa3.44□□□□□ -1.86
TRAV1-1-201ENST00000542354 TPRP12270 2363 aaKnown RBP3.44□□□□□ -1.86
TRAV1-1-201ENST00000542354 BRCA1P38398 1863 aaKnown RBP3.43□□□□□ -1.86
TRAV1-1-201ENST00000542354 USP47Q96K76 1375 aa3.43□□□□□ -1.86
TRAV1-1-201ENST00000542354 ATP5J2-PTCD1G3V325 749 aa3.43□□□□□ -1.86
TRAV1-1-201ENST00000542354 K7ELQ4 463 aaPredicted RBP3.43□□□□□ -1.86
TRAV1-1-201ENST00000542354 APBB1O00213 710 aa3.43□□□□□ -1.86
TRAV1-1-201ENST00000542354 ZBTB7BO15156 539 aaPredicted RBP3.43□□□□□ -1.86
TRAV1-1-201ENST00000542354 MX2P20592 715 aa3.43□□□□□ -1.86
TRAV1-1-201ENST00000542354 BMP8BP34820 402 aa3.43□□□□□ -1.86
TRAV1-1-201ENST00000542354 NHLH1Q02575 133 aa3.43□□□□□ -1.86
TRAV1-1-201ENST00000542354 PDE4DQ08499 809 aa3.43□□□□□ -1.86
TRAV1-1-201ENST00000542354 LBRQ14739 615 aaKnown RBP3.43□□□□□ -1.86
TRAV1-1-201ENST00000542354 SLC4A8Q2Y0W8 1093 aa3.43□□□□□ -1.86
TRAV1-1-201ENST00000542354 NOM1Q5C9Z4 860 aaKnown RBP3.43□□□□□ -1.86
TRAV1-1-201ENST00000542354 RNFT1Q5M7Z0 435 aa3.43□□□□□ -1.86
TRAV1-1-201ENST00000542354 RIPOR1Q6ZS17 1223 aa3.43□□□□□ -1.86
TRAV1-1-201ENST00000542354 CYP2U1Q7Z449 544 aa3.43□□□□□ -1.86
TRAV1-1-201ENST00000542354 TTLL6Q8N841 843 aa3.43□□□□□ -1.86
TRAV1-1-201ENST00000542354 DDRGK1Q96HY6 314 aa3.43□□□□□ -1.86
TRAV1-1-201ENST00000542354 CSRNP1Q96S65 589 aa3.43□□□□□ -1.86
TRAV1-1-201ENST00000542354 UHRF1Q96T88 793 aaPredicted RBP3.43□□□□□ -1.86
TRAV1-1-201ENST00000542354 NOP53Q9NZM5 478 aaKnown RBP3.43□□□□□ -1.86
TRAV1-1-201ENST00000542354 LIMD1Q9UGP4 676 aa3.43□□□□□ -1.86
TRAV1-1-201ENST00000542354 GDF2Q9UK05 429 aaPredicted RBP3.43□□□□□ -1.86
TRAV1-1-201ENST00000542354 KMT2BQ9UMN6 2715 aaPredicted RBP3.43□□□□□ -1.86
TRAV1-1-201ENST00000542354 CLTCL1P53675 1640 aa3.43□□□□□ -1.86
TRAV1-1-201ENST00000542354 NAV2Q8IVL1 2488 aa3.43□□□□□ -1.86
TRAV1-1-201ENST00000542354 TRPM3Q9HCF6 1732 aaPredicted RBP3.42□□□□□ -1.86
TRAV1-1-201ENST00000542354 CRYBG1Q9Y4K1 1723 aa3.42□□□□□ -1.86
TRAV1-1-201ENST00000542354 INSRP06213 1382 aa3.42□□□□□ -1.86
TRAV1-1-201ENST00000542354 CCDC7Q96M83 1385 aa3.42□□□□□ -1.86
TRAV1-1-201ENST00000542354 IQGAP3Q86VI3 1631 aa3.42□□□□□ -1.86
TRAV1-1-201ENST00000542354 WTIPA6NIX2 430 aaPredicted RBP3.42□□□□□ -1.86
TRAV1-1-201ENST00000542354 GPR25O00155 361 aa3.42□□□□□ -1.86
TRAV1-1-201ENST00000542354 FKTNO75072 461 aa3.42□□□□□ -1.86
TRAV1-1-201ENST00000542354 TBC1D8O95759 1140 aa3.42□□□□□ -1.86
TRAV1-1-201ENST00000542354 HUNKP57058 714 aa3.42□□□□□ -1.86
TRAV1-1-201ENST00000542354 QPCTQ16769 361 aa3.42□□□□□ -1.86
TRAV1-1-201ENST00000542354 PLA2G4EQ3MJ16 856 aa3.42□□□□□ -1.86
TRAV1-1-201ENST00000542354 RGMBQ6NW40 437 aa3.42□□□□□ -1.86
TRAV1-1-201ENST00000542354 NBPF11Q86T75 865 aa3.42□□□□□ -1.86
TRAV1-1-201ENST00000542354 SLC51AQ86UW1 340 aa3.42□□□□□ -1.86
TRAV1-1-201ENST00000542354 NLRP13Q86W25 1043 aa3.42□□□□□ -1.86
TRAV1-1-201ENST00000542354 PGBD3Q8N328 593 aa3.42□□□□□ -1.86
TRAV1-1-201ENST00000542354 ABTB2Q8N961 1025 aa3.42□□□□□ -1.86
TRAV1-1-201ENST00000542354 IL27Q8NEV9 243 aa3.42□□□□□ -1.86
TRAV1-1-201ENST00000542354 ADAM32Q8TC27 787 aa3.42□□□□□ -1.86
TRAV1-1-201ENST00000542354 ADAMTS19Q8TE59 1207 aa3.42□□□□□ -1.86
TRAV1-1-201ENST00000542354 ARMC5Q96C12 935 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms