RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 CTSWP56202 376 aa17.36■□□□□ 0.37
DDX55-209ENST00000542286 MYO5AQ9Y4I1 1855 aaKnown RBP17.36■□□□□ 0.37
DDX55-209ENST00000542286 WTIPA6NIX2 430 aaPredicted RBP17.36■□□□□ 0.37
DDX55-209ENST00000542286 SLC9C2Q5TAH2 1124 aa17.36■□□□□ 0.37
DDX55-209ENST00000542286 USP28Q96RU2 1077 aa17.36■□□□□ 0.37
DDX55-209ENST00000542286 TNMDQ9H2S6 317 aa17.36■□□□□ 0.37
DDX55-209ENST00000542286 SENP2Q9HC62 589 aa17.36■□□□□ 0.37
DDX55-209ENST00000542286 MRVI1Q9Y6F6 885 aa17.36■□□□□ 0.37
DDX55-209ENST00000542286 RFX7Q2KHR2 1363 aa17.36■□□□□ 0.37
DDX55-209ENST00000542286 APPP05067 770 aa17.35■□□□□ 0.37
DDX55-209ENST00000542286 FDPSP14324 419 aaKnown RBP17.35■□□□□ 0.37
DDX55-209ENST00000542286 CBX1P83916 185 aa17.35■□□□□ 0.37
DDX55-209ENST00000542286 CCDC144CPQ8IYA2 1237 aa17.35■□□□□ 0.37
DDX55-209ENST00000542286 ZNF710Q8N1W2 664 aa17.35■□□□□ 0.37
DDX55-209ENST00000542286 SMARCC2Q8TAQ2 1214 aa17.35■□□□□ 0.37
DDX55-209ENST00000542286 WWC3Q9ULE0 1092 aa17.35■□□□□ 0.37
DDX55-209ENST00000542286 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.35■□□□□ 0.37
DDX55-209ENST00000542286 EXOC5O00471 708 aa17.35■□□□□ 0.37
DDX55-209ENST00000542286 ANTXR2P58335 489 aa17.35■□□□□ 0.37
DDX55-209ENST00000542286 TYRO3Q06418 890 aa17.35■□□□□ 0.37
DDX55-209ENST00000542286 MAP3K11Q16584 847 aa17.35■□□□□ 0.37
DDX55-209ENST00000542286 ILDR1Q86SU0 546 aaPredicted RBP17.35■□□□□ 0.37
DDX55-209ENST00000542286 IQSEC3Q9UPP2 1182 aaPredicted RBP17.35■□□□□ 0.37
DDX55-209ENST00000542286 ITGB4P16144 1822 aa17.35■□□□□ 0.37
DDX55-209ENST00000542286 ADD1P35611 737 aaKnown RBP17.34■□□□□ 0.37
DDX55-209ENST00000542286 ANO6Q4KMQ2 910 aa17.34■□□□□ 0.37
DDX55-209ENST00000542286 AKAP2Q9Y2D5 859 aa17.34■□□□□ 0.37
DDX55-209ENST00000542286 ANKRD18BA2A2Z9 1011 aa17.34■□□□□ 0.37
DDX55-209ENST00000542286 PRC1O43663 620 aa17.34■□□□□ 0.37
DDX55-209ENST00000542286 POLR3DP05423 398 aaPredicted RBP17.34■□□□□ 0.37
DDX55-209ENST00000542286 TRIM28Q13263 835 aaKnown RBP17.34■□□□□ 0.37
DDX55-209ENST00000542286 AIFM3Q96NN9 605 aa17.34■□□□□ 0.37
DDX55-209ENST00000542286 SCAND2PQ9GZW5 306 aaPredicted RBP17.34■□□□□ 0.37
DDX55-209ENST00000542286 NBPF3Q9H094 633 aa17.34■□□□□ 0.37
DDX55-209ENST00000542286 NWD2Q9ULI1 1742 aa17.34■□□□□ 0.37
DDX55-209ENST00000542286 KLF18A0A0U1RQI7 1052 aa17.34■□□□□ 0.37
DDX55-209ENST00000542286 UBE2Q2LH0YL09 131 aa17.34■□□□□ 0.37
DDX55-209ENST00000542286 GOLPH3LQ9H4A5 285 aa17.34■□□□□ 0.37
DDX55-209ENST00000542286 BCL9O00512 1426 aa17.33■□□□□ 0.37
DDX55-209ENST00000542286 NUTM2BA6NNL0 878 aaPredicted RBP17.33■□□□□ 0.36
DDX55-209ENST00000542286 NUTM2EB1AL46 878 aaPredicted RBP17.33■□□□□ 0.36
DDX55-209ENST00000542286 NUTM2AQ8IVF1 878 aaPredicted RBP17.33■□□□□ 0.36
DDX55-209ENST00000542286 PRIMPOLQ96LW4 560 aa17.33■□□□□ 0.36
DDX55-209ENST00000542286 DNAJC25Q9H1X3 360 aa17.33■□□□□ 0.36
DDX55-209ENST00000542286 CCDC192P0DO97 292 aa17.33■□□□□ 0.36
DDX55-209ENST00000542286 SUSD4Q5VX71 490 aa17.33■□□□□ 0.36
DDX55-209ENST00000542286 GOLGA8BA8MQT2 603 aa17.32■□□□□ 0.36
DDX55-209ENST00000542286 CCDC102BQ68D86 513 aa17.32■□□□□ 0.36
DDX55-209ENST00000542286 TBC1D10CQ8IV04 446 aa17.32■□□□□ 0.36
DDX55-209ENST00000542286 APPBP2Q92624 585 aa17.32■□□□□ 0.36
DDX55-209ENST00000542286 PLEKHG2Q9H7P9 1386 aa17.32■□□□□ 0.36
DDX55-209ENST00000542286 ELP1O95163 1332 aa17.32■□□□□ 0.36
DDX55-209ENST00000542286 LETM1O95202 739 aaPredicted RBP17.32■□□□□ 0.36
DDX55-209ENST00000542286 HMGB1P09429 215 aaKnown RBP17.32■□□□□ 0.36
DDX55-209ENST00000542286 HMGN5P82970 282 aaKnown RBP17.32■□□□□ 0.36
DDX55-209ENST00000542286 IMMTQ16891 758 aaKnown RBP17.32■□□□□ 0.36
DDX55-209ENST00000542286 VGLL2Q8N8G2 317 aa17.32■□□□□ 0.36
DDX55-209ENST00000542286 MYL10Q9BUA6 226 aa17.32■□□□□ 0.36
DDX55-209ENST00000542286 SLIT2O94813 1529 aa17.32■□□□□ 0.36
DDX55-209ENST00000542286 ZNF532Q9HCE3 1301 aa17.31■□□□□ 0.36
DDX55-209ENST00000542286 TEX13AQ9BXU3 409 aaPredicted RBP17.31■□□□□ 0.36
DDX55-209ENST00000542286 NOLC1Q14978 699 aaKnown RBP eCLIP17.31■□□□□ 0.36
DDX55-209ENST00000542286 PLA2G12BQ9BX93 195 aa17.31■□□□□ 0.36
DDX55-209ENST00000542286 AGXT2Q9BYV1 514 aa17.31■□□□□ 0.36
DDX55-209ENST00000542286 CBX8Q9HC52 389 aa17.31■□□□□ 0.36
DDX55-209ENST00000542286 HPS5Q9UPZ3 1129 aa17.31■□□□□ 0.36
DDX55-209ENST00000542286 CARMIL3Q8ND23 1372 aa17.31■□□□□ 0.36
DDX55-209ENST00000542286 PDE8BO95263 885 aa17.3■□□□□ 0.36
DDX55-209ENST00000542286 PPP4R3BQ5MIZ7 849 aa17.3■□□□□ 0.36
DDX55-209ENST00000542286 CYB5R4Q7L1T6 521 aa17.3■□□□□ 0.36
DDX55-209ENST00000542286 PIBF1Q8WXW3 757 aa17.3■□□□□ 0.36
DDX55-209ENST00000542286 GTPBP4Q9BZE4 634 aaKnown RBP17.3■□□□□ 0.36
DDX55-209ENST00000542286 ZNF213O14771 459 aa17.3■□□□□ 0.36
DDX55-209ENST00000542286 KCNQ2O43526 872 aa17.3■□□□□ 0.36
DDX55-209ENST00000542286 MB21D2Q8IYB1 491 aaPredicted RBP17.3■□□□□ 0.36
DDX55-209ENST00000542286 SMIM22K7EJ46 135 aa17.29■□□□□ 0.36
DDX55-209ENST00000542286 GTF2F1P35269 517 aaKnown RBP eCLIP17.29■□□□□ 0.36
DDX55-209ENST00000542286 ATP6V1AP38606 617 aa17.29■□□□□ 0.36
DDX55-209ENST00000542286 CCAR1Q8IX12 1150 aaKnown RBP17.29■□□□□ 0.36
DDX55-209ENST00000542286 SALL1Q9NSC2 1324 aa17.29■□□□□ 0.36
DDX55-209ENST00000542286 B4E1Z4 1266 aa17.29■□□□□ 0.36
DDX55-209ENST00000542286 ADD2P35612 726 aa17.29■□□□□ 0.36
DDX55-209ENST00000542286 UVSSAQ2YD98 709 aa17.29■□□□□ 0.36
DDX55-209ENST00000542286 CLSTN2Q9H4D0 955 aa17.29■□□□□ 0.36
DDX55-209ENST00000542286 NRBP1Q9UHY1 535 aa17.29■□□□□ 0.36
DDX55-209ENST00000542286 PRKAB2O43741 272 aa17.28■□□□□ 0.36
DDX55-209ENST00000542286 ME1P48163 572 aa17.28■□□□□ 0.36
DDX55-209ENST00000542286 ITPK1Q13572 414 aa17.28■□□□□ 0.36
DDX55-209ENST00000542286 RALYLQ86SE5 291 aaKnown RBP17.28■□□□□ 0.36
DDX55-209ENST00000542286 KCNF1Q9H3M0 494 aa17.28■□□□□ 0.36
DDX55-209ENST00000542286 AKAP11Q9UKA4 1901 aa17.28■□□□□ 0.36
DDX55-209ENST00000542286 PDE8AO60658 829 aa17.28■□□□□ 0.36
DDX55-209ENST00000542286 CTDSPL2Q05D32 466 aa17.28■□□□□ 0.36
DDX55-209ENST00000542286 PHKBQ93100 1093 aa17.28■□□□□ 0.36
DDX55-209ENST00000542286 PYCARDQ9ULZ3 195 aa17.28■□□□□ 0.36
DDX55-209ENST00000542286 KIF3AQ9Y496 699 aa17.28■□□□□ 0.36
DDX55-209ENST00000542286 TACC3Q9Y6A5 838 aa17.28■□□□□ 0.36
DDX55-209ENST00000542286 KIF28PB7ZC32 967 aa17.28■□□□□ 0.36
DDX55-209ENST00000542286 PDE6AP16499 860 aa17.28■□□□□ 0.36
DDX55-209ENST00000542286 CRKLP46109 303 aaKnown RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms