RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 TAF6LQ9Y6J9 622 aa18.19■□□□□ 0.5
CLPTM1-202ENST00000541297 SLC27A2O14975 620 aa18.19■□□□□ 0.5
CLPTM1-202ENST00000541297 IDH1O75874 414 aaKnown RBP18.19■□□□□ 0.5
CLPTM1-202ENST00000541297 CASTP20810 708 aaKnown RBP18.19■□□□□ 0.5
CLPTM1-202ENST00000541297 GYG1P46976 350 aa18.19■□□□□ 0.5
CLPTM1-202ENST00000541297 ZGPATQ8N5A5 531 aaKnown RBP18.19■□□□□ 0.5
CLPTM1-202ENST00000541297 SPATA5Q8NB90 893 aa18.19■□□□□ 0.5
CLPTM1-202ENST00000541297 OSBP2Q969R2 916 aa18.19■□□□□ 0.5
CLPTM1-202ENST00000541297 IL17RAQ96F46 866 aa18.19■□□□□ 0.5
CLPTM1-202ENST00000541297 PDCL3Q9H2J4 239 aa18.19■□□□□ 0.5
CLPTM1-202ENST00000541297 PRPF40AO75400 957 aaKnown RBP18.18■□□□□ 0.5
CLPTM1-202ENST00000541297 ST5P78524 1137 aa18.18■□□□□ 0.5
CLPTM1-202ENST00000541297 JAKMIP1Q96N16 626 aaKnown RBP18.18■□□□□ 0.5
CLPTM1-202ENST00000541297 POLRMTO00411 1230 aaKnown RBP18.18■□□□□ 0.5
CLPTM1-202ENST00000541297 ZKSCAN1P17029 563 aaPredicted RBP18.18■□□□□ 0.5
CLPTM1-202ENST00000541297 EN1Q05925 392 aaPredicted RBP18.17■□□□□ 0.5
CLPTM1-202ENST00000541297 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.17■□□□□ 0.5
CLPTM1-202ENST00000541297 RBM27Q9P2N5 1060 aaKnown RBP18.17■□□□□ 0.5
CLPTM1-202ENST00000541297 KLRK1P26718 216 aa18.16■□□□□ 0.5
CLPTM1-202ENST00000541297 TTF1Q15361 905 aaPredicted RBP18.16■□□□□ 0.5
CLPTM1-202ENST00000541297 EZH2Q15910 746 aaKnown RBP18.16■□□□□ 0.5
CLPTM1-202ENST00000541297 SLC9C2Q5TAH2 1124 aa18.16■□□□□ 0.5
CLPTM1-202ENST00000541297 GPT2Q8TD30 523 aa18.16■□□□□ 0.5
CLPTM1-202ENST00000541297 RPGRQ92834 1020 aaKnown RBP18.16■□□□□ 0.5
CLPTM1-202ENST00000541297 LARP6Q9BRS8 491 aaKnown RBP18.16■□□□□ 0.5
CLPTM1-202ENST00000541297 PUS7LQ9H0K6 701 aaKnown RBP18.16■□□□□ 0.5
CLPTM1-202ENST00000541297 COL9A3Q14050 684 aaPredicted RBP18.16■□□□□ 0.5
CLPTM1-202ENST00000541297 UBE4AQ14139 1066 aa18.16■□□□□ 0.5
CLPTM1-202ENST00000541297 LRRFIP1Q32MZ4 808 aaKnown RBP18.16■□□□□ 0.5
CLPTM1-202ENST00000541297 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.16■□□□□ 0.5
CLPTM1-202ENST00000541297 HMGB2P26583 209 aaKnown RBP18.15■□□□□ 0.5
CLPTM1-202ENST00000541297 MSL1Q68DK7 614 aa18.15■□□□□ 0.5
CLPTM1-202ENST00000541297 CHAMP1Q96JM3 812 aa18.15■□□□□ 0.5
CLPTM1-202ENST00000541297 CWC22Q9HCG8 908 aaKnown RBP18.15■□□□□ 0.5
CLPTM1-202ENST00000541297 WWC3Q9ULE0 1092 aa18.15■□□□□ 0.5
CLPTM1-202ENST00000541297 ZDHHC9Q9Y397 364 aa18.15■□□□□ 0.5
CLPTM1-202ENST00000541297 ZFYP08048 801 aaPredicted RBP18.15■□□□□ 0.5
CLPTM1-202ENST00000541297 HS1BP3Q53T59 392 aa18.15■□□□□ 0.5
CLPTM1-202ENST00000541297 RNF20Q5VTR2 975 aa18.15■□□□□ 0.5
CLPTM1-202ENST00000541297 KCNB2Q92953 911 aa18.15■□□□□ 0.5
CLPTM1-202ENST00000541297 TMX3Q96JJ7 454 aa18.15■□□□□ 0.5
CLPTM1-202ENST00000541297 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.15■□□□□ 0.5
CLPTM1-202ENST00000541297 NOL7Q9UMY1 257 aaKnown RBP18.15■□□□□ 0.5
CLPTM1-202ENST00000541297 HSPD1P10809 573 aaKnown RBP18.14■□□□□ 0.5
CLPTM1-202ENST00000541297 RBM10P98175 930 aaKnown RBP18.14■□□□□ 0.5
CLPTM1-202ENST00000541297 GRAPQ13588 217 aa18.14■□□□□ 0.5
CLPTM1-202ENST00000541297 VPS37DQ86XT2 251 aa18.14■□□□□ 0.5
CLPTM1-202ENST00000541297 GRAPLQ8TC17 118 aaPredicted RBP18.14■□□□□ 0.5
CLPTM1-202ENST00000541297 PDLIM2Q96JY6 352 aa18.14■□□□□ 0.5
CLPTM1-202ENST00000541297 PNPLA7Q6ZV29 1317 aa18.14■□□□□ 0.5
CLPTM1-202ENST00000541297 DOCK2Q92608 1830 aa18.14■□□□□ 0.49
CLPTM1-202ENST00000541297 APPBP2Q92624 585 aa18.14■□□□□ 0.49
CLPTM1-202ENST00000541297 R3HCC1Q9Y3T6 440 aaKnown RBP18.14■□□□□ 0.49
CLPTM1-202ENST00000541297 RGPD3A6NKT7 1758 aaPredicted RBP18.14■□□□□ 0.49
CLPTM1-202ENST00000541297 ADD2P35612 726 aa18.14■□□□□ 0.49
CLPTM1-202ENST00000541297 RGPD4Q7Z3J3 1758 aa18.14■□□□□ 0.49
CLPTM1-202ENST00000541297 TICAM2Q86XR7 235 aa18.14■□□□□ 0.49
CLPTM1-202ENST00000541297 ZNF532Q9HCE3 1301 aa18.13■□□□□ 0.49
CLPTM1-202ENST00000541297 A0A0G2JLW4 131 aa18.13■□□□□ 0.49
CLPTM1-202ENST00000541297 CAVIN4Q5BKX8 364 aa18.13■□□□□ 0.49
CLPTM1-202ENST00000541297 U3KPZ7 1027 aaPredicted RBP18.13■□□□□ 0.49
CLPTM1-202ENST00000541297 MYH13Q9UKX3 1938 aa18.13■□□□□ 0.49
CLPTM1-202ENST00000541297 CYP21A2P08686 494 aa18.13■□□□□ 0.49
CLPTM1-202ENST00000541297 AK2P54819 239 aa18.13■□□□□ 0.49
CLPTM1-202ENST00000541297 NLGN1Q8N2Q7 840 aa18.13■□□□□ 0.49
CLPTM1-202ENST00000541297 FAM84BQ96KN1 310 aaPredicted RBP18.13■□□□□ 0.49
CLPTM1-202ENST00000541297 TTC14Q96N46 770 aa18.13■□□□□ 0.49
CLPTM1-202ENST00000541297 ANKRD2Q9GZV1 360 aa18.13■□□□□ 0.49
CLPTM1-202ENST00000541297 ANKIB1Q9P2G1 1089 aa18.13■□□□□ 0.49
CLPTM1-202ENST00000541297 PDE6AP16499 860 aa18.12■□□□□ 0.49
CLPTM1-202ENST00000541297 MCM2P49736 904 aa18.12■□□□□ 0.49
CLPTM1-202ENST00000541297 ZSCAN25Q6NSZ9 544 aa18.12■□□□□ 0.49
CLPTM1-202ENST00000541297 TCEANC2Q96MN5 208 aa18.12■□□□□ 0.49
CLPTM1-202ENST00000541297 CYP46A1Q9Y6A2 500 aa18.12■□□□□ 0.49
CLPTM1-202ENST00000541297 ANKRD31Q8N7Z5 1873 aa18.12■□□□□ 0.49
CLPTM1-202ENST00000541297 CRY2Q49AN0 593 aa18.12■□□□□ 0.49
CLPTM1-202ENST00000541297 RUFY3Q7L099 469 aa18.12■□□□□ 0.49
CLPTM1-202ENST00000541297 ZSWIM6Q9HCJ5 1215 aa18.12■□□□□ 0.49
CLPTM1-202ENST00000541297 ZNF804BA4D1E1 1349 aa18.11■□□□□ 0.49
CLPTM1-202ENST00000541297 GPAA1O43292 621 aa18.11■□□□□ 0.49
CLPTM1-202ENST00000541297 ZNF500O60304 480 aaPredicted RBP18.11■□□□□ 0.49
CLPTM1-202ENST00000541297 TERF1P54274 439 aa18.11■□□□□ 0.49
CLPTM1-202ENST00000541297 FOXD4L5Q5VV16 416 aaPredicted RBP18.11■□□□□ 0.49
CLPTM1-202ENST00000541297 MAGEB6Q8N7X4 407 aa18.11■□□□□ 0.49
CLPTM1-202ENST00000541297 FOXD4L4Q8WXT5 416 aaPredicted RBP18.11■□□□□ 0.49
CLPTM1-202ENST00000541297 DSCC1Q9BVC3 393 aa18.11■□□□□ 0.49
CLPTM1-202ENST00000541297 TMEM63CQ9P1W3 806 aa18.11■□□□□ 0.49
CLPTM1-202ENST00000541297 NSFL1CQ9UNZ2 370 aaKnown RBP18.11■□□□□ 0.49
CLPTM1-202ENST00000541297 COL1A1P02452 1464 aaPredicted RBP18.11■□□□□ 0.49
CLPTM1-202ENST00000541297 RPAP1Q9BWH6 1393 aaPredicted RBP18.11■□□□□ 0.49
CLPTM1-202ENST00000541297 MMP10P09238 476 aa18.11■□□□□ 0.49
CLPTM1-202ENST00000541297 TXNRD3Q86VQ6 643 aa18.11■□□□□ 0.49
CLPTM1-202ENST00000541297 FLAD1Q8NFF5 587 aa18.11■□□□□ 0.49
CLPTM1-202ENST00000541297 CAMKK2Q96RR4 588 aa18.11■□□□□ 0.49
CLPTM1-202ENST00000541297 PDRG1Q9NUG6 133 aa18.11■□□□□ 0.49
CLPTM1-202ENST00000541297 ABCF2Q9UG63 623 aa18.11■□□□□ 0.49
CLPTM1-202ENST00000541297 LAMA4Q16363 1823 aa18.1■□□□□ 0.49
CLPTM1-202ENST00000541297 TTLL5Q6EMB2 1281 aa18.1■□□□□ 0.49
CLPTM1-202ENST00000541297 TM6SF1Q9BZW5 370 aa18.1■□□□□ 0.49
CLPTM1-202ENST00000541297 GNL3LQ9NVN8 582 aaKnown RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms