RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 MMP10P09238 476 aa8.22□□□□□ -1.09
CLTCL1-206ENST00000540896 CASP7P55210 303 aa8.22□□□□□ -1.09
CLTCL1-206ENST00000540896 NFIXQ14938 502 aa8.22□□□□□ -1.09
CLTCL1-206ENST00000540896 EPHA10Q5JZY3 1008 aa8.22□□□□□ -1.09
CLTCL1-206ENST00000540896 RBM26Q5T8P6 1007 aaKnown RBP8.22□□□□□ -1.09
CLTCL1-206ENST00000540896 ANKRD45Q5TZF3 282 aa8.22□□□□□ -1.09
CLTCL1-206ENST00000540896 LMBR1LQ6UX01 489 aa8.22□□□□□ -1.09
CLTCL1-206ENST00000540896 TPTE2Q6XPS3 522 aa8.22□□□□□ -1.09
CLTCL1-206ENST00000540896 ZNF598Q86UK7 904 aaKnown RBP8.22□□□□□ -1.09
CLTCL1-206ENST00000540896 SULF1Q8IWU6 871 aa8.22□□□□□ -1.09
CLTCL1-206ENST00000540896 SMC5Q8IY18 1101 aa8.22□□□□□ -1.09
CLTCL1-206ENST00000540896 SYNE4Q8N205 404 aa8.22□□□□□ -1.09
CLTCL1-206ENST00000540896 SSH3Q8TE77 659 aa8.22□□□□□ -1.09
CLTCL1-206ENST00000540896 KAZALD1Q96I82 304 aa8.22□□□□□ -1.09
CLTCL1-206ENST00000540896 NYXQ9GZU5 481 aa8.22□□□□□ -1.09
CLTCL1-206ENST00000540896 DCTPP1Q9H773 170 aa8.22□□□□□ -1.09
CLTCL1-206ENST00000540896 UBN2Q6ZU65 1347 aa8.22□□□□□ -1.09
CLTCL1-206ENST00000540896 PDE8AO60658 829 aa8.21□□□□□ -1.1
CLTCL1-206ENST00000540896 HCLS1P14317 486 aaPredicted RBP8.21□□□□□ -1.1
CLTCL1-206ENST00000540896 RGS3P49796 1198 aa8.21□□□□□ -1.1
CLTCL1-206ENST00000540896 FOXO4P98177 505 aa8.21□□□□□ -1.1
CLTCL1-206ENST00000540896 DDR1Q08345 913 aa8.21□□□□□ -1.1
CLTCL1-206ENST00000540896 G3BP1Q13283 466 aaKnown RBP eCLIP8.21□□□□□ -1.1
CLTCL1-206ENST00000540896 MTX1Q13505 466 aa8.21□□□□□ -1.1
CLTCL1-206ENST00000540896 CCDC57Q2TAC2 916 aa8.21□□□□□ -1.1
CLTCL1-206ENST00000540896 HSP90AB4PQ58FF6 505 aa8.21□□□□□ -1.1
CLTCL1-206ENST00000540896 TAF7LQ5H9L4 462 aa8.21□□□□□ -1.1
CLTCL1-206ENST00000540896 SPRYD7Q5W111 196 aa8.21□□□□□ -1.1
CLTCL1-206ENST00000540896 NUTM1Q86Y26 1132 aa8.21□□□□□ -1.1
CLTCL1-206ENST00000540896 SCUBE3Q8IX30 993 aa8.21□□□□□ -1.1
CLTCL1-206ENST00000540896 CCDC85AQ96PX6 553 aaPredicted RBP8.21□□□□□ -1.1
CLTCL1-206ENST00000540896 SLC6A16Q9GZN6 736 aa8.21□□□□□ -1.1
CLTCL1-206ENST00000540896 PARP3Q9Y6F1 533 aa8.21□□□□□ -1.1
CLTCL1-206ENST00000540896 CDHR2Q9BYE9 1310 aa8.21□□□□□ -1.1
CLTCL1-206ENST00000540896 SCN7AQ01118 1682 aa8.21□□□□□ -1.1
CLTCL1-206ENST00000540896 BCORQ6W2J9 1755 aa8.2□□□□□ -1.1
CLTCL1-206ENST00000540896 ARFGEF2Q9Y6D5 1785 aa8.2□□□□□ -1.1
CLTCL1-206ENST00000540896 NUP98P52948 1817 aa8.2□□□□□ -1.1
CLTCL1-206ENST00000540896 POLRMTO00411 1230 aaKnown RBP8.2□□□□□ -1.1
CLTCL1-206ENST00000540896 TLL1O43897 1013 aa8.2□□□□□ -1.1
CLTCL1-206ENST00000540896 RAB11FIP3O75154 756 aa8.2□□□□□ -1.1
CLTCL1-206ENST00000540896 NTSR2O95665 410 aa8.2□□□□□ -1.1
CLTCL1-206ENST00000540896 S1PR4O95977 384 aa8.2□□□□□ -1.1
CLTCL1-206ENST00000540896 SERPINB2P05120 415 aa8.2□□□□□ -1.1
CLTCL1-206ENST00000540896 NUCB1Q02818 461 aa8.2□□□□□ -1.1
CLTCL1-206ENST00000540896 IFIT5Q13325 482 aaKnown RBP8.2□□□□□ -1.1
CLTCL1-206ENST00000540896 RABL6Q3YEC7 729 aaPredicted RBP8.2□□□□□ -1.1
CLTCL1-206ENST00000540896 ERFEQ4G0M1 354 aa8.2□□□□□ -1.1
CLTCL1-206ENST00000540896 CHD1LQ86WJ1 897 aa8.2□□□□□ -1.1
CLTCL1-206ENST00000540896 PLA2G12BQ9BX93 195 aa8.2□□□□□ -1.1
CLTCL1-206ENST00000540896 LNPKQ9C0E8 428 aa8.2□□□□□ -1.1
CLTCL1-206ENST00000540896 EXOC6BQ9Y2D4 811 aa8.2□□□□□ -1.1
CLTCL1-206ENST00000540896 ANKRD18BA2A2Z9 1011 aa8.19□□□□□ -1.1
CLTCL1-206ENST00000540896 TULP1O00294 542 aaPredicted RBP8.19□□□□□ -1.1
CLTCL1-206ENST00000540896 CTSWP56202 376 aa8.19□□□□□ -1.1
CLTCL1-206ENST00000540896 CCDC152Q4G0S7 254 aa8.19□□□□□ -1.1
CLTCL1-206ENST00000540896 ERC1Q8IUD2 1116 aa8.19□□□□□ -1.1
CLTCL1-206ENST00000540896 CNBD1Q8NA66 436 aa8.19□□□□□ -1.1
CLTCL1-206ENST00000540896 RDH13Q8NBN7 331 aa8.19□□□□□ -1.1
CLTCL1-206ENST00000540896 KLHDC4Q8TBB5 520 aa8.19□□□□□ -1.1
CLTCL1-206ENST00000540896 LRRCC1Q9C099 1032 aa8.19□□□□□ -1.1
CLTCL1-206ENST00000540896 SIL1Q9H173 461 aa8.19□□□□□ -1.1
CLTCL1-206ENST00000540896 PPP1R1BQ9UD71 204 aaPredicted RBP8.19□□□□□ -1.1
CLTCL1-206ENST00000540896 PA2G4Q9UQ80 394 aaKnown RBP8.19□□□□□ -1.1
CLTCL1-206ENST00000540896 COL24A1Q17RW2 1714 aa8.19□□□□□ -1.1
CLTCL1-206ENST00000540896 CARMIL3Q8ND23 1372 aa8.19□□□□□ -1.1
CLTCL1-206ENST00000540896 SMARCA5O60264 1052 aaPredicted RBP8.18□□□□□ -1.1
CLTCL1-206ENST00000540896 DGAT1O75907 488 aa8.18□□□□□ -1.1
CLTCL1-206ENST00000540896 CSF1RP07333 972 aa8.18□□□□□ -1.1
CLTCL1-206ENST00000540896 ST5P78524 1137 aa8.18□□□□□ -1.1
CLTCL1-206ENST00000540896 PRR20EP86478 221 aa8.18□□□□□ -1.1
CLTCL1-206ENST00000540896 PRR20CP86479 221 aa8.18□□□□□ -1.1
CLTCL1-206ENST00000540896 PRR20DP86480 221 aa8.18□□□□□ -1.1
CLTCL1-206ENST00000540896 PRR20BP86481 221 aa8.18□□□□□ -1.1
CLTCL1-206ENST00000540896 PRR20AP86496 221 aa8.18□□□□□ -1.1
CLTCL1-206ENST00000540896 SLC10A5Q5PT55 438 aa8.18□□□□□ -1.1
CLTCL1-206ENST00000540896 SKAP1Q86WV1 359 aa8.18□□□□□ -1.1
CLTCL1-206ENST00000540896 CCDC24Q8N4L8 307 aa8.18□□□□□ -1.1
CLTCL1-206ENST00000540896 TTLL11Q8NHH1 800 aa8.18□□□□□ -1.1
CLTCL1-206ENST00000540896 KIF1BPQ96EK5 621 aa8.18□□□□□ -1.1
CLTCL1-206ENST00000540896 NLRP3Q96P20 1036 aa8.18□□□□□ -1.1
CLTCL1-206ENST00000540896 SPSB2Q99619 263 aa8.18□□□□□ -1.1
CLTCL1-206ENST00000540896 COPRSQ9NQ92 184 aa8.18□□□□□ -1.1
CLTCL1-206ENST00000540896 ITGA6P23229 1130 aa8.17□□□□□ -1.1
CLTCL1-206ENST00000540896 PTPN12Q05209 780 aaKnown RBP8.17□□□□□ -1.1
CLTCL1-206ENST00000540896 GRIPAP1Q4V328 841 aa8.17□□□□□ -1.1
CLTCL1-206ENST00000540896 PRR5LQ6MZQ0 368 aa8.17□□□□□ -1.1
CLTCL1-206ENST00000540896 RHPN1Q8TCX5 695 aa8.17□□□□□ -1.1
CLTCL1-206ENST00000540896 ZNF594Q96JF6 807 aaPredicted RBP8.17□□□□□ -1.1
CLTCL1-206ENST00000540896 GREM2Q9H772 168 aa8.17□□□□□ -1.1
CLTCL1-206ENST00000540896 IL1RAPL2Q9NP60 686 aa8.17□□□□□ -1.1
CLTCL1-206ENST00000540896 CNNM1Q9NRU3 951 aa8.17□□□□□ -1.1
CLTCL1-206ENST00000540896 NOP58Q9Y2X3 529 aaKnown RBP8.17□□□□□ -1.1
CLTCL1-206ENST00000540896 ANKRD36CQ5JPF3 1778 aa8.17□□□□□ -1.1
CLTCL1-206ENST00000540896 N4BP2Q86UW6 1770 aaPredicted RBP8.17□□□□□ -1.1
CLTCL1-206ENST00000540896 AFDNP55196 1824 aaKnown RBP8.17□□□□□ -1.1
CLTCL1-206ENST00000540896 DDX11L8A8MPP1 907 aa8.16□□□□□ -1.1
CLTCL1-206ENST00000540896 EYA2O00167 538 aa8.16□□□□□ -1.1
CLTCL1-206ENST00000540896 IL15P40933 162 aaPredicted RBP8.16□□□□□ -1.1
CLTCL1-206ENST00000540896 RFX5P48382 616 aaPredicted RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms