RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 CDC5LQ99459 802 aaKnown RBP7.68□□□□□ -1.18
CPSF7-219ENST00000539952 COA1Q9GZY4 146 aa7.68□□□□□ -1.18
CPSF7-219ENST00000539952 EFCC1Q9HA90 598 aa7.68□□□□□ -1.18
CPSF7-219ENST00000539952 CHPF2Q9P2E5 772 aa7.68□□□□□ -1.18
CPSF7-219ENST00000539952 ANGEL1Q9UNK9 670 aaKnown RBP7.68□□□□□ -1.18
CPSF7-219ENST00000539952 PCCAP05165 728 aaPredicted RBP7.67□□□□□ -1.18
CPSF7-219ENST00000539952 EN2P19622 333 aaPredicted RBP7.67□□□□□ -1.18
CPSF7-219ENST00000539952 SP3Q02447 781 aa7.67□□□□□ -1.18
CPSF7-219ENST00000539952 PRKG1Q13976 671 aa7.67□□□□□ -1.18
CPSF7-219ENST00000539952 DACT2Q5SW24 774 aa7.67□□□□□ -1.18
CPSF7-219ENST00000539952 ZNF428Q96B54 188 aa7.67□□□□□ -1.18
CPSF7-219ENST00000539952 BSDC1Q9NW68 430 aaPredicted RBP7.67□□□□□ -1.18
CPSF7-219ENST00000539952 SCAF8Q9UPN6 1271 aaKnown RBP7.67□□□□□ -1.18
CPSF7-219ENST00000539952 LEMD3Q9Y2U8 911 aa7.67□□□□□ -1.18
CPSF7-219ENST00000539952 KIAA0100Q14667 2235 aaKnown RBP7.67□□□□□ -1.18
CPSF7-219ENST00000539952 LAMB4A4D0S4 1761 aa7.66□□□□□ -1.18
CPSF7-219ENST00000539952 GOLGA2Q08379 1002 aa7.66□□□□□ -1.18
CPSF7-219ENST00000539952 DDX10Q13206 875 aaKnown RBP7.66□□□□□ -1.18
CPSF7-219ENST00000539952 DEFB129Q9H1M3 183 aa7.66□□□□□ -1.18
CPSF7-219ENST00000539952 MINPP1Q9UNW1 487 aa7.66□□□□□ -1.18
CPSF7-219ENST00000539952 COLQQ9Y215 455 aaPredicted RBP7.66□□□□□ -1.18
CPSF7-219ENST00000539952 LAS1LQ9Y4W2 734 aaKnown RBP7.66□□□□□ -1.18
CPSF7-219ENST00000539952 PPP2R3BQ9Y5P8 575 aa7.66□□□□□ -1.18
CPSF7-219ENST00000539952 DUOX1Q9NRD9 1551 aa7.66□□□□□ -1.18
CPSF7-219ENST00000539952 PAPPA2Q9BXP8 1791 aa7.66□□□□□ -1.18
CPSF7-219ENST00000539952 TESPA1A2RU30 521 aaPredicted RBP7.65□□□□□ -1.18
CPSF7-219ENST00000539952 HAX1O00165 279 aa7.65□□□□□ -1.18
CPSF7-219ENST00000539952 MYO1BO43795 1136 aa7.65□□□□□ -1.18
CPSF7-219ENST00000539952 WDHD1O75717 1129 aaPredicted RBP7.65□□□□□ -1.18
CPSF7-219ENST00000539952 IREB2P48200 963 aaKnown RBP7.65□□□□□ -1.18
CPSF7-219ENST00000539952 CCT4P50991 539 aaKnown RBP7.65□□□□□ -1.18
CPSF7-219ENST00000539952 DLGAP5Q15398 846 aa7.65□□□□□ -1.18
CPSF7-219ENST00000539952 NEUROD2Q15784 382 aa7.65□□□□□ -1.18
CPSF7-219ENST00000539952 KRT24Q2M2I5 525 aa7.65□□□□□ -1.18
CPSF7-219ENST00000539952 DUSP27Q5VZP5 1158 aa7.65□□□□□ -1.18
CPSF7-219ENST00000539952 KDM3BQ7LBC6 1761 aa7.65□□□□□ -1.18
CPSF7-219ENST00000539952 MTMR14Q8NCE2 650 aa7.65□□□□□ -1.18
CPSF7-219ENST00000539952 CD99L2Q8TCZ2 262 aa7.65□□□□□ -1.18
CPSF7-219ENST00000539952 FBXW7Q969H0 707 aa7.65□□□□□ -1.18
CPSF7-219ENST00000539952 ZBED3Q96IU2 234 aaPredicted RBP7.65□□□□□ -1.18
CPSF7-219ENST00000539952 WNK4Q96J92 1243 aa7.65□□□□□ -1.18
CPSF7-219ENST00000539952 MYD88Q99836 296 aa7.65□□□□□ -1.18
CPSF7-219ENST00000539952 ANKRD2Q9GZV1 360 aa7.65□□□□□ -1.18
CPSF7-219ENST00000539952 CWC25Q9NXE8 425 aaPredicted RBP7.65□□□□□ -1.18
CPSF7-219ENST00000539952 TAF1P21675 1872 aa7.64□□□□□ -1.19
CPSF7-219ENST00000539952 MED23Q9ULK4 1368 aa7.64□□□□□ -1.19
CPSF7-219ENST00000539952 IGF2BP3O00425 579 aaKnown RBP eCLIP7.64□□□□□ -1.19
CPSF7-219ENST00000539952 GALR2O43603 387 aaPredicted RBP7.64□□□□□ -1.19
CPSF7-219ENST00000539952 USP2O75604 605 aaPredicted RBP7.64□□□□□ -1.19
CPSF7-219ENST00000539952 DDX58O95786 925 aaKnown RBP7.64□□□□□ -1.19
CPSF7-219ENST00000539952 SLC4A8Q2Y0W8 1093 aa7.64□□□□□ -1.19
CPSF7-219ENST00000539952 ANKRD13AQ8IZ07 590 aa7.64□□□□□ -1.19
CPSF7-219ENST00000539952 EFCAB3Q8N7B9 438 aa7.64□□□□□ -1.19
CPSF7-219ENST00000539952 TTLL11Q8NHH1 800 aa7.64□□□□□ -1.19
CPSF7-219ENST00000539952 CCDC85AQ96PX6 553 aaPredicted RBP7.64□□□□□ -1.19
CPSF7-219ENST00000539952 METTL22Q9BUU2 404 aaPredicted RBP7.64□□□□□ -1.19
CPSF7-219ENST00000539952 MFRPQ9BY79 579 aa7.64□□□□□ -1.19
CPSF7-219ENST00000539952 ZFYVE28Q9HCC9 887 aa7.64□□□□□ -1.19
CPSF7-219ENST00000539952 PPP1R37O75864 691 aa7.63□□□□□ -1.19
CPSF7-219ENST00000539952 SASH1O94885 1247 aa7.63□□□□□ -1.19
CPSF7-219ENST00000539952 GNRH1P01148 92 aa7.63□□□□□ -1.19
CPSF7-219ENST00000539952 IGHMBP2P38935 993 aaKnown RBP7.63□□□□□ -1.19
CPSF7-219ENST00000539952 GTF2IP78347 998 aa7.63□□□□□ -1.19
CPSF7-219ENST00000539952 CRHR2Q13324 411 aa7.63□□□□□ -1.19
CPSF7-219ENST00000539952 SLC9C1Q4G0N8 1177 aa7.63□□□□□ -1.19
CPSF7-219ENST00000539952 KIAA0825Q8IV33 1275 aa7.63□□□□□ -1.19
CPSF7-219ENST00000539952 OTUD5Q96G74 571 aa7.63□□□□□ -1.19
CPSF7-219ENST00000539952 ZNF333Q96JL9 665 aa7.63□□□□□ -1.19
CPSF7-219ENST00000539952 MXD3Q9BW11 206 aa7.63□□□□□ -1.19
CPSF7-219ENST00000539952 PHAXQ9H814 394 aaKnown RBP7.63□□□□□ -1.19
CPSF7-219ENST00000539952 LAMB2P55268 1798 aa7.62□□□□□ -1.19
CPSF7-219ENST00000539952 ZNF804BA4D1E1 1349 aa7.62□□□□□ -1.19
CPSF7-219ENST00000539952 LRRC37AA6NMS7 1700 aa7.62□□□□□ -1.19
CPSF7-219ENST00000539952 H0YGN5 161 aa7.62□□□□□ -1.19
CPSF7-219ENST00000539952 PRMT2P55345 433 aa7.62□□□□□ -1.19
CPSF7-219ENST00000539952 FKBP1AP62942 108 aaKnown RBP7.62□□□□□ -1.19
CPSF7-219ENST00000539952 KIF22Q14807 665 aa7.62□□□□□ -1.19
CPSF7-219ENST00000539952 RALBP1Q15311 655 aa7.62□□□□□ -1.19
CPSF7-219ENST00000539952 TXNRD3Q86VQ6 643 aa7.62□□□□□ -1.19
CPSF7-219ENST00000539952 SLC17A8Q8NDX2 589 aa7.62□□□□□ -1.19
CPSF7-219ENST00000539952 DPF3Q92784 378 aa7.62□□□□□ -1.19
CPSF7-219ENST00000539952 JARID2Q92833 1246 aaPredicted RBP7.62□□□□□ -1.19
CPSF7-219ENST00000539952 RUNDC1Q96C34 613 aa7.62□□□□□ -1.19
CPSF7-219ENST00000539952 CLMNQ96JQ2 1002 aa7.62□□□□□ -1.19
CPSF7-219ENST00000539952 PTPN18Q99952 460 aa7.62□□□□□ -1.19
CPSF7-219ENST00000539952 CD209Q9NNX6 404 aa7.62□□□□□ -1.19
CPSF7-219ENST00000539952 TRIM35Q9UPQ4 493 aa7.62□□□□□ -1.19
CPSF7-219ENST00000539952 SCN9AQ15858 1988 aa7.62□□□□□ -1.19
CPSF7-219ENST00000539952 DLG5Q8TDM6 1919 aa7.61□□□□□ -1.19
CPSF7-219ENST00000539952 WTIPA6NIX2 430 aaPredicted RBP7.61□□□□□ -1.19
CPSF7-219ENST00000539952 CAPN2P17655 700 aa7.61□□□□□ -1.19
CPSF7-219ENST00000539952 KCNJ4P48050 445 aa7.61□□□□□ -1.19
CPSF7-219ENST00000539952 GTF2A2P52657 109 aa7.61□□□□□ -1.19
CPSF7-219ENST00000539952 CTSWP56202 376 aa7.61□□□□□ -1.19
CPSF7-219ENST00000539952 NEXNQ0ZGT2 675 aa7.61□□□□□ -1.19
CPSF7-219ENST00000539952 TNFAIP1Q13829 316 aa7.61□□□□□ -1.19
CPSF7-219ENST00000539952 NBPF12Q5TAG4 269 aaPredicted RBP7.61□□□□□ -1.19
CPSF7-219ENST00000539952 CCDC30Q5VVM6 783 aa7.61□□□□□ -1.19
CPSF7-219ENST00000539952 KSR2Q6VAB6 950 aa7.61□□□□□ -1.19
CPSF7-219ENST00000539952 NKX2-3Q8TAU0 364 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms