RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 PI4KAP1Q8N8J0 262 aa9.44□□□□□ -0.9
GNE-205ENST00000539815 ANP32CO43423 234 aa9.44□□□□□ -0.9
GNE-205ENST00000539815 DLK2Q6UY11 383 aa9.44□□□□□ -0.9
GNE-205ENST00000539815 TBC1D22AQ8WUA7 517 aa9.44□□□□□ -0.9
GNE-205ENST00000539815 TEKT1Q969V4 418 aa9.44□□□□□ -0.9
GNE-205ENST00000539815 POLLQ9UGP5 575 aa9.44□□□□□ -0.9
GNE-205ENST00000539815 PPP2R3BQ9Y5P8 575 aa9.44□□□□□ -0.9
GNE-205ENST00000539815 UBN2Q6ZU65 1347 aa9.44□□□□□ -0.9
GNE-205ENST00000539815 FARP2O94887 1054 aaPredicted RBP9.44□□□□□ -0.9
GNE-205ENST00000539815 HIBADHP31937 336 aaKnown RBP9.44□□□□□ -0.9
GNE-205ENST00000539815 RGS19P49795 217 aa9.44□□□□□ -0.9
GNE-205ENST00000539815 RGS3P49796 1198 aa9.44□□□□□ -0.9
GNE-205ENST00000539815 PRMT2P55345 433 aa9.44□□□□□ -0.9
GNE-205ENST00000539815 FCGRTP55899 365 aa9.44□□□□□ -0.9
GNE-205ENST00000539815 KCNH4Q9UQ05 1017 aa9.44□□□□□ -0.9
GNE-205ENST00000539815 SHTN1A0MZ66 631 aa9.43□□□□□ -0.9
GNE-205ENST00000539815 APAF1O14727 1248 aa9.43□□□□□ -0.9
GNE-205ENST00000539815 CTSWP56202 376 aa9.43□□□□□ -0.9
GNE-205ENST00000539815 WRNIP1Q96S55 665 aa9.43□□□□□ -0.9
GNE-205ENST00000539815 IQSEC3Q9UPP2 1182 aaPredicted RBP9.43□□□□□ -0.9
GNE-205ENST00000539815 PITPNM2Q9BZ72 1349 aa9.43□□□□□ -0.9
GNE-205ENST00000539815 ZBTB48P10074 688 aaPredicted RBP9.43□□□□□ -0.9
GNE-205ENST00000539815 ITGA6P23229 1130 aa9.43□□□□□ -0.9
GNE-205ENST00000539815 BCAMP50895 628 aa9.43□□□□□ -0.9
GNE-205ENST00000539815 OTOP1Q7RTM1 612 aa9.43□□□□□ -0.9
GNE-205ENST00000539815 HSP90AA2PQ14568 343 aaPredicted RBP9.43□□□□□ -0.9
GNE-205ENST00000539815 DZIP1Q86YF9 867 aaKnown RBP9.43□□□□□ -0.9
GNE-205ENST00000539815 IVNS1ABPQ9Y6Y0 642 aa9.43□□□□□ -0.9
GNE-205ENST00000539815 CCDC27Q2M243 656 aa9.42□□□□□ -0.9
GNE-205ENST00000539815 PROSER3Q2NL68 480 aa9.42□□□□□ -0.9
GNE-205ENST00000539815 FEZ1Q99689 392 aa9.42□□□□□ -0.9
GNE-205ENST00000539815 RTFDC1Q9BY42 306 aaPredicted RBP9.42□□□□□ -0.9
GNE-205ENST00000539815 ABCF2Q9UG63 623 aa9.42□□□□□ -0.9
GNE-205ENST00000539815 GLRX3O76003 335 aaKnown RBP9.42□□□□□ -0.9
GNE-205ENST00000539815 PSMC4P43686 418 aa9.42□□□□□ -0.9
GNE-205ENST00000539815 IRX3P78415 501 aaPredicted RBP9.42□□□□□ -0.9
GNE-205ENST00000539815 KSR2Q6VAB6 950 aa9.42□□□□□ -0.9
GNE-205ENST00000539815 CRACR2BQ8N4Y2 399 aaPredicted RBP9.42□□□□□ -0.9
GNE-205ENST00000539815 PARK7Q99497 189 aaKnown RBP9.42□□□□□ -0.9
GNE-205ENST00000539815 WNT10BO00744 389 aa9.42□□□□□ -0.9
GNE-205ENST00000539815 SECISBP2LQ93073 1101 aaKnown RBP9.42□□□□□ -0.9
GNE-205ENST00000539815 WNK4Q96J92 1243 aa9.42□□□□□ -0.9
GNE-205ENST00000539815 PNMA3Q9UL41 463 aa9.42□□□□□ -0.9
GNE-205ENST00000539815 IBTKQ9P2D0 1353 aaPredicted RBP9.41□□□□□ -0.9
GNE-205ENST00000539815 APBB1O00213 710 aa9.41□□□□□ -0.9
GNE-205ENST00000539815 METTL22Q9BUU2 404 aaPredicted RBP9.41□□□□□ -0.9
GNE-205ENST00000539815 LY75O60449 1722 aa9.41□□□□□ -0.9
GNE-205ENST00000539815 YDJCA8MPS7 323 aa9.41□□□□□ -0.9
GNE-205ENST00000539815 TWISTNBQ3B726 338 aaPredicted RBP9.41□□□□□ -0.9
GNE-205ENST00000539815 C3orf67Q6ZVT6 689 aa9.41□□□□□ -0.9
GNE-205ENST00000539815 IFNL1Q8IU54 200 aa9.41□□□□□ -0.9
GNE-205ENST00000539815 PLCD3Q8N3E9 789 aa9.41□□□□□ -0.9
GNE-205ENST00000539815 IPO4Q8TEX9 1081 aaKnown RBP9.41□□□□□ -0.9
GNE-205ENST00000539815 OPTNQ96CV9 577 aa9.41□□□□□ -0.9
GNE-205ENST00000539815 BSDC1Q9NW68 430 aaPredicted RBP9.41□□□□□ -0.9
GNE-205ENST00000539815 RAD21O60216 631 aa9.41□□□□□ -0.9
GNE-205ENST00000539815 CNGA1P29973 690 aa9.41□□□□□ -0.9
GNE-205ENST00000539815 GRK4P32298 578 aa9.41□□□□□ -0.9
GNE-205ENST00000539815 MRS2Q9HD23 443 aa9.41□□□□□ -0.9
GNE-205ENST00000539815 CEP126Q9P2H0 1117 aa9.41□□□□□ -0.9
GNE-205ENST00000539815 ZBTB47Q9UFB7 747 aaPredicted RBP9.41□□□□□ -0.9
GNE-205ENST00000539815 TAF5LO75529 589 aa9.4□□□□□ -0.9
GNE-205ENST00000539815 SLC5A1P13866 664 aa9.4□□□□□ -0.9
GNE-205ENST00000539815 DNAAF4Q8WXU2 420 aa9.4□□□□□ -0.9
GNE-205ENST00000539815 VTI1AQ96AJ9 217 aa9.4□□□□□ -0.9
GNE-205ENST00000539815 TDRD3Q9H7E2 651 aaKnown RBP9.4□□□□□ -0.9
GNE-205ENST00000539815 TMOD4Q9NZQ9 345 aa9.4□□□□□ -0.9
GNE-205ENST00000539815 TNRC6CQ9HCJ0 1690 aaKnown RBP9.4□□□□□ -0.9
GNE-205ENST00000539815 EN2P19622 333 aaPredicted RBP9.4□□□□□ -0.9
GNE-205ENST00000539815 NECAB2Q7Z6G3 386 aa9.4□□□□□ -0.9
GNE-205ENST00000539815 ERO1BQ86YB8 467 aa9.4□□□□□ -0.9
GNE-205ENST00000539815 ZNF341Q9BYN7 854 aa9.4□□□□□ -0.9
GNE-205ENST00000539815 CD209Q9NNX6 404 aa9.4□□□□□ -0.9
GNE-205ENST00000539815 MYO9BQ13459 2157 aa9.4□□□□□ -0.91
GNE-205ENST00000539815 LDHCP07864 332 aa9.4□□□□□ -0.91
GNE-205ENST00000539815 TCP10Q12799 353 aa9.4□□□□□ -0.91
GNE-205ENST00000539815 ATF7IPQ6VMQ6 1270 aa9.4□□□□□ -0.91
GNE-205ENST00000539815 UBR3Q6ZT12 1888 aa9.39□□□□□ -0.91
GNE-205ENST00000539815 MAP2P11137 1827 aaKnown RBP9.39□□□□□ -0.91
GNE-205ENST00000539815 KRT24Q2M2I5 525 aa9.39□□□□□ -0.91
GNE-205ENST00000539815 FASTKD5Q7L8L6 764 aaKnown RBP9.39□□□□□ -0.91
GNE-205ENST00000539815 CNKSR2Q8WXI2 1034 aa9.39□□□□□ -0.91
GNE-205ENST00000539815 SRCIN1Q9C0H9 1055 aa9.39□□□□□ -0.91
GNE-205ENST00000539815 KCNQ5Q9NR82 932 aa9.39□□□□□ -0.91
GNE-205ENST00000539815 CPA4Q9UI42 421 aa9.39□□□□□ -0.91
GNE-205ENST00000539815 CRHR2Q13324 411 aa9.39□□□□□ -0.91
GNE-205ENST00000539815 TMEM132AQ24JP5 1023 aa9.39□□□□□ -0.91
GNE-205ENST00000539815 SH3TC2Q8TF17 1288 aa9.39□□□□□ -0.91
GNE-205ENST00000539815 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.39□□□□□ -0.91
GNE-205ENST00000539815 PRDM4Q9UKN5 801 aa9.39□□□□□ -0.91
GNE-205ENST00000539815 MINPP1Q9UNW1 487 aa9.39□□□□□ -0.91
GNE-205ENST00000539815 NOP58Q9Y2X3 529 aaKnown RBP9.39□□□□□ -0.91
GNE-205ENST00000539815 CUL9Q8IWT3 2517 aa9.38□□□□□ -0.91
GNE-205ENST00000539815 CHRNDQ07001 517 aa9.38□□□□□ -0.91
GNE-205ENST00000539815 LMBR1LQ6UX01 489 aa9.38□□□□□ -0.91
GNE-205ENST00000539815 SPINK5Q9NQ38 1064 aaPredicted RBP9.38□□□□□ -0.91
GNE-205ENST00000539815 PGAP2Q9UHJ9 254 aa9.38□□□□□ -0.91
GNE-205ENST00000539815 PTPN22Q9Y2R2 807 aa9.38□□□□□ -0.91
GNE-205ENST00000539815 NBPF12Q5TAG4 269 aaPredicted RBP9.38□□□□□ -0.91
GNE-205ENST00000539815 GREM2Q9H772 168 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms