RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 APOBEC3FQ8IUX4 373 aaKnown RBP19.06■□□□□ 0.64
USB1-203ENST00000539737 MIER1Q8N108 512 aa19.06■□□□□ 0.64
USB1-203ENST00000539737 LEMD3Q9Y2U8 911 aa19.06■□□□□ 0.64
USB1-203ENST00000539737 MYO3BQ8WXR4 1341 aa19.05■□□□□ 0.64
USB1-203ENST00000539737 SREBF2Q12772 1141 aa19.05■□□□□ 0.64
USB1-203ENST00000539737 PKN2Q16513 984 aaKnown RBP19.05■□□□□ 0.64
USB1-203ENST00000539737 TWISTNBQ3B726 338 aaPredicted RBP19.05■□□□□ 0.64
USB1-203ENST00000539737 NBPF12Q5TAG4 269 aaPredicted RBP19.05■□□□□ 0.64
USB1-203ENST00000539737 WNK4Q96J92 1243 aa19.05■□□□□ 0.64
USB1-203ENST00000539737 ZNF594Q96JF6 807 aaPredicted RBP19.05■□□□□ 0.64
USB1-203ENST00000539737 MPHOSPH8Q99549 860 aa19.05■□□□□ 0.64
USB1-203ENST00000539737 VEZTQ9HBM0 779 aa19.05■□□□□ 0.64
USB1-203ENST00000539737 OTOFQ9HC10 1997 aa19.04■□□□□ 0.64
USB1-203ENST00000539737 KIAA0100Q14667 2235 aaKnown RBP19.04■□□□□ 0.64
USB1-203ENST00000539737 DLGAP5Q15398 846 aa19.04■□□□□ 0.64
USB1-203ENST00000539737 CFAP100Q494V2 611 aa19.04■□□□□ 0.64
USB1-203ENST00000539737 IFNL1Q8IU54 200 aa19.04■□□□□ 0.64
USB1-203ENST00000539737 PRMT6Q96LA8 375 aaPredicted RBP19.04■□□□□ 0.64
USB1-203ENST00000539737 STK31Q9BXU1 1019 aa19.04■□□□□ 0.64
USB1-203ENST00000539737 PCDH10Q9P2E7 1040 aa19.04■□□□□ 0.64
USB1-203ENST00000539737 F6X3S4 739 aa19.03■□□□□ 0.64
USB1-203ENST00000539737 PLIN1O60240 522 aa19.03■□□□□ 0.64
USB1-203ENST00000539737 EPHA10Q5JZY3 1008 aa19.03■□□□□ 0.64
USB1-203ENST00000539737 OTOP1Q7RTM1 612 aa19.03■□□□□ 0.64
USB1-203ENST00000539737 WDR63Q8IWG1 891 aa19.03■□□□□ 0.64
USB1-203ENST00000539737 CD99L2Q8TCZ2 262 aa19.03■□□□□ 0.64
USB1-203ENST00000539737 CNKSR2Q8WXI2 1034 aa19.03■□□□□ 0.64
USB1-203ENST00000539737 SLC10A4Q96EP9 437 aa19.03■□□□□ 0.64
USB1-203ENST00000539737 CHMP3Q9Y3E7 222 aa19.03■□□□□ 0.64
USB1-203ENST00000539737 SALL2Q9Y467 1007 aaPredicted RBP19.03■□□□□ 0.64
USB1-203ENST00000539737 ECM29Q5VYK3 1845 aa19.02■□□□□ 0.64
USB1-203ENST00000539737 CSF1RP07333 972 aa19.02■□□□□ 0.64
USB1-203ENST00000539737 FLIIQ13045 1269 aa19.02■□□□□ 0.64
USB1-203ENST00000539737 ANKRD2Q9GZV1 360 aa19.02■□□□□ 0.64
USB1-203ENST00000539737 CRHR2Q13324 411 aa19.01■□□□□ 0.63
USB1-203ENST00000539737 FKBP5Q13451 457 aaPredicted RBP19.01■□□□□ 0.63
USB1-203ENST00000539737 PTPN18Q99952 460 aa19.01■□□□□ 0.63
USB1-203ENST00000539737 PLA2G12BQ9BX93 195 aa19.01■□□□□ 0.63
USB1-203ENST00000539737 ZSWIM8A7E2V4 1837 aa19.01■□□□□ 0.63
USB1-203ENST00000539737 FOXO4P98177 505 aa19■□□□□ 0.63
USB1-203ENST00000539737 DNAAF4Q8WXU2 420 aa19■□□□□ 0.63
USB1-203ENST00000539737 ELP3Q9H9T3 547 aa19■□□□□ 0.63
USB1-203ENST00000539737 ANKRD18BA2A2Z9 1011 aa18.99■□□□□ 0.63
USB1-203ENST00000539737 SPDYE2BA6NHP3 402 aa18.99■□□□□ 0.63
USB1-203ENST00000539737 USP2O75604 605 aaPredicted RBP18.99■□□□□ 0.63
USB1-203ENST00000539737 ECM2O94769 699 aaPredicted RBP18.99■□□□□ 0.63
USB1-203ENST00000539737 MYCP01106 439 aaPredicted RBP18.99■□□□□ 0.63
USB1-203ENST00000539737 SPDYE6P0CI01 402 aa18.99■□□□□ 0.63
USB1-203ENST00000539737 RBM5P52756 815 aaKnown RBP eCLIP18.99■□□□□ 0.63
USB1-203ENST00000539737 CFHR5Q9BXR6 569 aa18.99■□□□□ 0.63
USB1-203ENST00000539737 MANSC4A6NHS7 340 aaPredicted RBP18.98■□□□□ 0.63
USB1-203ENST00000539737 EN2P19622 333 aaPredicted RBP18.98■□□□□ 0.63
USB1-203ENST00000539737 RASA3Q14644 834 aa18.98■□□□□ 0.63
USB1-203ENST00000539737 GRIK5Q16478 980 aa18.98■□□□□ 0.63
USB1-203ENST00000539737 NOM1Q5C9Z4 860 aaKnown RBP18.98■□□□□ 0.63
USB1-203ENST00000539737 ZNF521Q96K83 1311 aa18.98■□□□□ 0.63
USB1-203ENST00000539737 FANCIQ9NVI1 1328 aa18.98■□□□□ 0.63
USB1-203ENST00000539737 MAP3K11Q16584 847 aa18.97■□□□□ 0.63
USB1-203ENST00000539737 COL1A1P02452 1464 aaPredicted RBP18.97■□□□□ 0.63
USB1-203ENST00000539737 LAMB1P07942 1786 aa18.96■□□□□ 0.63
USB1-203ENST00000539737 LMBR1LQ6UX01 489 aa18.96■□□□□ 0.63
USB1-203ENST00000539737 LINS1Q8NG48 757 aa18.96■□□□□ 0.63
USB1-203ENST00000539737 MYH16Q9H6N6 1097 aa18.96■□□□□ 0.63
USB1-203ENST00000539737 TDRD3Q9H7E2 651 aaKnown RBP18.96■□□□□ 0.63
USB1-203ENST00000539737 PTPN22Q9Y2R2 807 aa18.96■□□□□ 0.63
USB1-203ENST00000539737 IL1R1P14778 569 aa18.95■□□□□ 0.62
USB1-203ENST00000539737 GYG1P46976 350 aa18.95■□□□□ 0.62
USB1-203ENST00000539737 MTMR14Q8NCE2 650 aa18.95■□□□□ 0.62
USB1-203ENST00000539737 PUS3Q9BZE2 481 aaKnown RBP18.95■□□□□ 0.62
USB1-203ENST00000539737 IQSEC3Q9UPP2 1182 aaPredicted RBP18.95■□□□□ 0.62
USB1-203ENST00000539737 TCP10L2B9ZVM9 353 aa18.94■□□□□ 0.62
USB1-203ENST00000539737 PPP1R12BO60237 982 aaPredicted RBP18.94■□□□□ 0.62
USB1-203ENST00000539737 ZBTB48P10074 688 aaPredicted RBP18.94■□□□□ 0.62
USB1-203ENST00000539737 CACNB3P54284 484 aa18.94■□□□□ 0.62
USB1-203ENST00000539737 EXOSC9Q06265 439 aaKnown RBP18.94■□□□□ 0.62
USB1-203ENST00000539737 IFIT5Q13325 482 aaKnown RBP18.94■□□□□ 0.62
USB1-203ENST00000539737 ZNF804AQ7Z570 1209 aa18.94■□□□□ 0.62
USB1-203ENST00000539737 OPTNQ96CV9 577 aa18.94■□□□□ 0.62
USB1-203ENST00000539737 SPINK5Q9NQ38 1064 aaPredicted RBP18.94■□□□□ 0.62
USB1-203ENST00000539737 ZNF70Q9UC06 446 aaPredicted RBP18.94■□□□□ 0.62
USB1-203ENST00000539737 CEP290O15078 2479 aa18.93■□□□□ 0.62
USB1-203ENST00000539737 VAMP4O75379 141 aa18.93■□□□□ 0.62
USB1-203ENST00000539737 ALDH1A1P00352 501 aa18.93■□□□□ 0.62
USB1-203ENST00000539737 HABP4Q5JVS0 413 aaKnown RBP18.93■□□□□ 0.62
USB1-203ENST00000539737 TMEM39BQ9GZU3 492 aa18.93■□□□□ 0.62
USB1-203ENST00000539737 BEND3Q5T5X7 828 aa18.92■□□□□ 0.62
USB1-203ENST00000539737 C15orf52Q6ZUT6 534 aaKnown RBP18.92■□□□□ 0.62
USB1-203ENST00000539737 BRI3BPQ8WY22 251 aa18.92■□□□□ 0.62
USB1-203ENST00000539737 TEPSINQ96N21 525 aa18.92■□□□□ 0.62
USB1-203ENST00000539737 ARHGAP39Q9C0H5 1083 aa18.92■□□□□ 0.62
USB1-203ENST00000539737 EFCC1Q9HA90 598 aa18.92■□□□□ 0.62
USB1-203ENST00000539737 TTF2Q9UNY4 1162 aaKnown RBP18.92■□□□□ 0.62
USB1-203ENST00000539737 RBBP6Q7Z6E9 1792 aaKnown RBP18.91■□□□□ 0.62
USB1-203ENST00000539737 MYO1BO43795 1136 aa18.91■□□□□ 0.62
USB1-203ENST00000539737 IREB2P48200 963 aaKnown RBP18.91■□□□□ 0.62
USB1-203ENST00000539737 SUPT20HL1Q3ZLR7 823 aa18.91■□□□□ 0.62
USB1-203ENST00000539737 SPDYE2Q495Y8 402 aa18.91■□□□□ 0.62
USB1-203ENST00000539737 MFSD14BQ5SR56 506 aa18.91■□□□□ 0.62
USB1-203ENST00000539737 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.91■□□□□ 0.62
USB1-203ENST00000539737 FAM43AQ8N2R8 423 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 184.1 ms