RNA–Protein interactions for RNA: ENST00000537551.5

CHFR-215, Transcript of checkpoint with forkhead and ring finger domains, human

TSL 2

Gene CHFR, Length 596 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHFR-215	ENST00000537551	DNAJC5G	Q8N7S2	189 aa		28.84	■■■□□ 2.21
CHFR-215	ENST00000537551	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	28.84	■■■□□ 2.21
CHFR-215	ENST00000537551	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	28.84	■■■□□ 2.21
CHFR-215	ENST00000537551	MMP14	P50281	582 aa		28.83	■■■□□ 2.21
CHFR-215	ENST00000537551	USP48	Q86UV5	1035 aa		28.83	■■■□□ 2.21
CHFR-215	ENST00000537551	FKBP1A	P62942	108 aa	Known RBP	28.82	■■■□□ 2.2
CHFR-215	ENST00000537551	ATP8B2	P98198	1209 aa		28.82	■■■□□ 2.2
CHFR-215	ENST00000537551	CERS5	Q8N5B7	392 aa		28.82	■■■□□ 2.2
CHFR-215	ENST00000537551	FAM205A	Q6ZU69	1335 aa		28.82	■■■□□ 2.2
CHFR-215	ENST00000537551		F8W031	263 aa	Predicted RBP	28.81	■■■□□ 2.2
CHFR-215	ENST00000537551	G3BP1	Q13283	466 aa	Known RBP eCLIP	28.81	■■■□□ 2.2
CHFR-215	ENST00000537551	KRT26	Q7Z3Y9	468 aa		28.81	■■■□□ 2.2
CHFR-215	ENST00000537551	KLRG1	Q96E93	195 aa		28.81	■■■□□ 2.2
CHFR-215	ENST00000537551	GGA3	Q9NZ52	723 aa		28.81	■■■□□ 2.2
CHFR-215	ENST00000537551	COG6	Q9Y2V7	657 aa		28.81	■■■□□ 2.2
CHFR-215	ENST00000537551	ASTN2	O75129	1339 aa	Predicted RBP	28.8	■■■□□ 2.2
CHFR-215	ENST00000537551	CHAF1A	Q13111	956 aa	Predicted RBP	28.8	■■■□□ 2.2
CHFR-215	ENST00000537551	MVP	Q14764	893 aa	Known RBP	28.8	■■■□□ 2.2
CHFR-215	ENST00000537551	MFSD14B	Q5SR56	506 aa		28.8	■■■□□ 2.2
CHFR-215	ENST00000537551	ZNF646	O15015	1829 aa	Predicted RBP	28.79	■■■□□ 2.2
CHFR-215	ENST00000537551	ANGEL2	Q5VTE6	544 aa	Known RBP	28.79	■■■□□ 2.2
CHFR-215	ENST00000537551	SULF1	Q8IWU6	871 aa		28.79	■■■□□ 2.2
CHFR-215	ENST00000537551	DDX19B	Q9UMR2	479 aa		28.79	■■■□□ 2.2
CHFR-215	ENST00000537551	TFCP2	Q12800	502 aa		28.78	■■■□□ 2.2
CHFR-215	ENST00000537551	NBPF9	Q3BBW0	867 aa		28.78	■■■□□ 2.2
CHFR-215	ENST00000537551	ZNF408	Q9H9D4	720 aa		28.78	■■■□□ 2.2
CHFR-215	ENST00000537551	AKAP2	Q9Y2D5	859 aa		28.78	■■■□□ 2.2
CHFR-215	ENST00000537551	CELF2	O95319	508 aa	Known RBP	28.77	■■■□□ 2.2
CHFR-215	ENST00000537551	POLA2	Q14181	598 aa		28.77	■■■□□ 2.2
CHFR-215	ENST00000537551	SSH3	Q8TE77	659 aa		28.77	■■■□□ 2.2
CHFR-215	ENST00000537551	ABT1	Q9ULW3	272 aa	Known RBP	28.77	■■■□□ 2.2
CHFR-215	ENST00000537551	ADM5	C9JUS6	153 aa		28.76	■■■□□ 2.19
CHFR-215	ENST00000537551	WNT10B	O00744	389 aa		28.76	■■■□□ 2.19
CHFR-215	ENST00000537551	OS9	Q13438	667 aa	Predicted RBP	28.76	■■■□□ 2.19
CHFR-215	ENST00000537551	GNL3L	Q9NVN8	582 aa	Known RBP	28.76	■■■□□ 2.19
CHFR-215	ENST00000537551	MKRN1	Q9UHC7	482 aa	Known RBP	28.76	■■■□□ 2.19
CHFR-215	ENST00000537551	TIMM10	P62072	90 aa		28.75	■■■□□ 2.19
CHFR-215	ENST00000537551	DLGAP5	Q15398	846 aa		28.75	■■■□□ 2.19
CHFR-215	ENST00000537551	CST9	Q5W186	159 aa		28.75	■■■□□ 2.19
CHFR-215	ENST00000537551	DLK2	Q6UY11	383 aa		28.75	■■■□□ 2.19
CHFR-215	ENST00000537551	TBC1D22A	Q8WUA7	517 aa		28.75	■■■□□ 2.19
CHFR-215	ENST00000537551	CHMP4B	Q9H444	224 aa	Known RBP	28.75	■■■□□ 2.19
CHFR-215	ENST00000537551	CEP350	Q5VT06	3117 aa		28.75	■■■□□ 2.19
CHFR-215	ENST00000537551	POLR2A	P24928	1970 aa	Known RBP	28.74	■■■□□ 2.19
CHFR-215	ENST00000537551	SURF6	O75683	361 aa	Known RBP	28.74	■■■□□ 2.19
CHFR-215	ENST00000537551	PDE3A	Q14432	1141 aa		28.74	■■■□□ 2.19
CHFR-215	ENST00000537551	RBM5	P52756	815 aa	Known RBP eCLIP	28.73	■■■□□ 2.19
CHFR-215	ENST00000537551	CEP85	Q6P2H3	762 aa		28.73	■■■□□ 2.19
CHFR-215	ENST00000537551	NEUROD6	Q96NK8	337 aa		28.73	■■■□□ 2.19
CHFR-215	ENST00000537551	TTF2	Q9UNY4	1162 aa	Known RBP	28.73	■■■□□ 2.19
CHFR-215	ENST00000537551	PITPNM2	Q9BZ72	1349 aa		28.72	■■■□□ 2.19
CHFR-215	ENST00000537551		A0A1B0GUL7	405 aa		28.72	■■■□□ 2.19
CHFR-215	ENST00000537551	ADORA1	P30542	326 aa		28.72	■■■□□ 2.19
CHFR-215	ENST00000537551	CFAP100	Q494V2	611 aa		28.72	■■■□□ 2.19
CHFR-215	ENST00000537551	C20orf194	Q5TEA3	1177 aa		28.72	■■■□□ 2.19
CHFR-215	ENST00000537551	TRPM7	Q96QT4	1865 aa		28.71	■■■□□ 2.19
CHFR-215	ENST00000537551	PHKA1	P46020	1223 aa		28.7	■■■□□ 2.18
CHFR-215	ENST00000537551	DEFB115	Q30KQ5	88 aa		28.7	■■■□□ 2.18
CHFR-215	ENST00000537551	MTMR14	Q8NCE2	650 aa		28.7	■■■□□ 2.18
CHFR-215	ENST00000537551	XAGE2	Q96GT9	111 aa		28.7	■■■□□ 2.18
CHFR-215	ENST00000537551	ZBED3	Q96IU2	234 aa	Predicted RBP	28.7	■■■□□ 2.18
CHFR-215	ENST00000537551	SCAF8	Q9UPN6	1271 aa	Known RBP	28.7	■■■□□ 2.18
CHFR-215	ENST00000537551	CCDC102B	Q68D86	513 aa		28.69	■■■□□ 2.18
CHFR-215	ENST00000537551	WDR66	Q8TBY9	1149 aa		28.69	■■■□□ 2.18
CHFR-215	ENST00000537551	ZBTB40	Q9NUA8	1239 aa		28.69	■■■□□ 2.18
CHFR-215	ENST00000537551	PCDHAC2	Q9Y5I4	1007 aa		28.69	■■■□□ 2.18
CHFR-215	ENST00000537551	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	28.69	■■■□□ 2.18
CHFR-215	ENST00000537551	CNTNAP1	P78357	1384 aa		28.69	■■■□□ 2.18
CHFR-215	ENST00000537551	MYO1B	O43795	1136 aa		28.68	■■■□□ 2.18
CHFR-215	ENST00000537551	GORAB	Q5T7V8	394 aa		28.68	■■■□□ 2.18
CHFR-215	ENST00000537551	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	28.68	■■■□□ 2.18
CHFR-215	ENST00000537551	DENND2A	Q9ULE3	1009 aa		28.68	■■■□□ 2.18
CHFR-215	ENST00000537551	RASSF10	A6NK89	507 aa		28.67	■■■□□ 2.18
CHFR-215	ENST00000537551	GRIK5	Q16478	980 aa		28.67	■■■□□ 2.18
CHFR-215	ENST00000537551	CDCA5	Q96FF9	252 aa		28.67	■■■□□ 2.18
CHFR-215	ENST00000537551	PRMT6	Q96LA8	375 aa	Predicted RBP	28.67	■■■□□ 2.18
CHFR-215	ENST00000537551	SERPINA10	Q9UK55	444 aa		28.67	■■■□□ 2.18
CHFR-215	ENST00000537551	NOP58	Q9Y2X3	529 aa	Known RBP	28.67	■■■□□ 2.18
CHFR-215	ENST00000537551	TLL2	Q9Y6L7	1015 aa		28.67	■■■□□ 2.18
CHFR-215	ENST00000537551	SPDYE2B	A6NHP3	402 aa		28.66	■■■□□ 2.18
CHFR-215	ENST00000537551	SEMA3E	O15041	775 aa		28.66	■■■□□ 2.18
CHFR-215	ENST00000537551	SPDYE6	P0CI01	402 aa		28.66	■■■□□ 2.18
CHFR-215	ENST00000537551	APOBEC3F	Q8IUX4	373 aa	Known RBP	28.66	■■■□□ 2.18
CHFR-215	ENST00000537551	RPAP2	Q8IXW5	612 aa	Predicted RBP	28.66	■■■□□ 2.18
CHFR-215	ENST00000537551	C2orf69	Q8N8R5	385 aa		28.65	■■■□□ 2.18
CHFR-215	ENST00000537551	SUGT1	Q9Y2Z0	365 aa		28.65	■■■□□ 2.18
CHFR-215	ENST00000537551	CRK	P46108	304 aa		28.64	■■■□□ 2.18
CHFR-215	ENST00000537551	VEGFB	P49765	207 aa		28.64	■■■□□ 2.18
CHFR-215	ENST00000537551	SAPCD2	Q86UD0	394 aa		28.64	■■■□□ 2.18
CHFR-215	ENST00000537551	JMY	Q8N9B5	988 aa		28.64	■■■□□ 2.18
CHFR-215	ENST00000537551	GBA2	Q9HCG7	927 aa	Predicted RBP	28.64	■■■□□ 2.18
CHFR-215	ENST00000537551	CLRN2	A0PK11	232 aa		28.63	■■■□□ 2.17
CHFR-215	ENST00000537551	HMMR	O75330	724 aa		28.63	■■■□□ 2.17
CHFR-215	ENST00000537551	PRAMEF18	Q5VWM3	479 aa		28.63	■■■□□ 2.17
CHFR-215	ENST00000537551	VEZT	Q9HBM0	779 aa		28.63	■■■□□ 2.17
CHFR-215	ENST00000537551	MAST3	O60307	1309 aa		28.63	■■■□□ 2.17
CHFR-215	ENST00000537551	HDLBP	Q00341	1268 aa	Known RBP	28.62	■■■□□ 2.17
CHFR-215	ENST00000537551	GRM1	Q13255	1194 aa		28.62	■■■□□ 2.17
CHFR-215	ENST00000537551	TNNI3K	Q59H18	835 aa		28.62	■■■□□ 2.17
CHFR-215	ENST00000537551	TEKT1	Q969V4	418 aa		28.62	■■■□□ 2.17

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms