RNA–Protein interactions for RNA: ENST00000536144.1

MRE11-206, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 3

Gene MRE11, Length 619 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-206ENST00000536144 LMNB1P20700 586 aa11.31□□□□□ -0.6
MRE11-206ENST00000536144 BCAMP50895 628 aa11.31□□□□□ -0.6
MRE11-206ENST00000536144 FKBP4Q02790 459 aaKnown RBP eCLIP11.31□□□□□ -0.6
MRE11-206ENST00000536144 OLFM4Q6UX06 510 aa11.31□□□□□ -0.6
MRE11-206ENST00000536144 RBM46Q8TBY0 533 aaKnown RBP11.31□□□□□ -0.6
MRE11-206ENST00000536144 KAZALD1Q96I82 304 aa11.31□□□□□ -0.6
MRE11-206ENST00000536144 PSMD1Q99460 953 aa11.31□□□□□ -0.6
MRE11-206ENST00000536144 TAOK3Q9H2K8 898 aa11.31□□□□□ -0.6
MRE11-206ENST00000536144 SNED1Q8TER0 1413 aa11.31□□□□□ -0.6
MRE11-206ENST00000536144 DDX60Q8IY21 1712 aaKnown RBP11.31□□□□□ -0.6
MRE11-206ENST00000536144 SLX4Q8IY92 1834 aa11.3□□□□□ -0.6
MRE11-206ENST00000536144 FECHP22830 423 aa11.3□□□□□ -0.6
MRE11-206ENST00000536144 ITGA6P23229 1130 aa11.3□□□□□ -0.6
MRE11-206ENST00000536144 YY1P25490 414 aa11.3□□□□□ -0.6
MRE11-206ENST00000536144 RABL6Q3YEC7 729 aaPredicted RBP11.3□□□□□ -0.6
MRE11-206ENST00000536144 EPHA10Q5JZY3 1008 aa11.3□□□□□ -0.6
MRE11-206ENST00000536144 LMBR1LQ6UX01 489 aa11.3□□□□□ -0.6
MRE11-206ENST00000536144 ANKRD18AQ8IVF6 992 aa11.3□□□□□ -0.6
MRE11-206ENST00000536144 DZIP1LQ8IYY4 767 aaKnown RBP11.3□□□□□ -0.6
MRE11-206ENST00000536144 CLUAP1Q96AJ1 413 aa11.3□□□□□ -0.6
MRE11-206ENST00000536144 SUCLG2Q96I99 432 aa11.3□□□□□ -0.6
MRE11-206ENST00000536144 LRCH3Q96II8 777 aa11.3□□□□□ -0.6
MRE11-206ENST00000536144 CCDC85AQ96PX6 553 aaPredicted RBP11.3□□□□□ -0.6
MRE11-206ENST00000536144 RTFDC1Q9BY42 306 aaPredicted RBP11.3□□□□□ -0.6
MRE11-206ENST00000536144 VPS33BQ9H267 617 aa11.3□□□□□ -0.6
MRE11-206ENST00000536144 BSDC1Q9NW68 430 aaPredicted RBP11.3□□□□□ -0.6
MRE11-206ENST00000536144 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.3□□□□□ -0.6
MRE11-206ENST00000536144 ANKRD18BA2A2Z9 1011 aa11.29□□□□□ -0.6
MRE11-206ENST00000536144 SOWAHBA6NEL2 793 aa11.29□□□□□ -0.6
MRE11-206ENST00000536144 GNAI3P08754 354 aa11.29□□□□□ -0.6
MRE11-206ENST00000536144 UBTFL1P0CB47 393 aaPredicted RBP11.29□□□□□ -0.6
MRE11-206ENST00000536144 PRELPP51888 382 aa11.29□□□□□ -0.6
MRE11-206ENST00000536144 RASSF7Q02833 373 aa11.29□□□□□ -0.6
MRE11-206ENST00000536144 IFIT5Q13325 482 aaKnown RBP11.29□□□□□ -0.6
MRE11-206ENST00000536144 C9orf131Q5VYM1 1079 aa11.29□□□□□ -0.6
MRE11-206ENST00000536144 FTSJ3Q8IY81 847 aaKnown RBP11.29□□□□□ -0.6
MRE11-206ENST00000536144 MPNDQ8N594 471 aa11.29□□□□□ -0.6
MRE11-206ENST00000536144 TNNQ9UQP3 1299 aa11.29□□□□□ -0.6
MRE11-206ENST00000536144 ADGRG1Q9Y653 693 aa11.29□□□□□ -0.6
MRE11-206ENST00000536144 ZC3H4Q9UPT8 1303 aaKnown RBP11.29□□□□□ -0.6
MRE11-206ENST00000536144 LAMB2P55268 1798 aa11.28□□□□□ -0.6
MRE11-206ENST00000536144 GPR37O15354 613 aa11.28□□□□□ -0.6
MRE11-206ENST00000536144 IGHMBP2P38935 993 aaKnown RBP11.28□□□□□ -0.6
MRE11-206ENST00000536144 CCDC57Q2TAC2 916 aa11.28□□□□□ -0.6
MRE11-206ENST00000536144 SAMD7Q7Z3H4 446 aa11.28□□□□□ -0.6
MRE11-206ENST00000536144 TMEM57Q8N5G2 664 aa11.28□□□□□ -0.6
MRE11-206ENST00000536144 ANKRD44Q8N8A2 993 aa11.28□□□□□ -0.6
MRE11-206ENST00000536144 SUPT20HQ8NEM7 779 aa11.28□□□□□ -0.6
MRE11-206ENST00000536144 MEIS3Q99687 375 aa11.28□□□□□ -0.6
MRE11-206ENST00000536144 BICC1Q9H694 974 aaKnown RBP11.28□□□□□ -0.6
MRE11-206ENST00000536144 PODXL2Q9NZ53 605 aa11.28□□□□□ -0.6
MRE11-206ENST00000536144 RNF181Q9P0P0 153 aa11.28□□□□□ -0.6
MRE11-206ENST00000536144 RLBP1P12271 317 aa11.27□□□□□ -0.61
MRE11-206ENST00000536144 DPP8Q6V1X1 898 aaPredicted RBP11.27□□□□□ -0.61
MRE11-206ENST00000536144 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.27□□□□□ -0.61
MRE11-206ENST00000536144 MPHOSPH8Q99549 860 aa11.27□□□□□ -0.61
MRE11-206ENST00000536144 NSFL1CQ9UNZ2 370 aaKnown RBP11.27□□□□□ -0.61
MRE11-206ENST00000536144 RNF40O75150 1001 aa11.26□□□□□ -0.61
MRE11-206ENST00000536144 OATP04181 439 aa11.26□□□□□ -0.61
MRE11-206ENST00000536144 IARSP41252 1262 aaKnown RBP11.26□□□□□ -0.61
MRE11-206ENST00000536144 GPSM2P81274 684 aa11.26□□□□□ -0.61
MRE11-206ENST00000536144 PDE3AQ14432 1141 aa11.26□□□□□ -0.61
MRE11-206ENST00000536144 SLC51AQ86UW1 340 aa11.26□□□□□ -0.61
MRE11-206ENST00000536144 ZNF277Q9NRM2 450 aaPredicted RBP11.26□□□□□ -0.61
MRE11-206ENST00000536144 MINPP1Q9UNW1 487 aa11.26□□□□□ -0.61
MRE11-206ENST00000536144 CHMP3Q9Y3E7 222 aa11.26□□□□□ -0.61
MRE11-206ENST00000536144 ZBTB7BO15156 539 aaPredicted RBP11.25□□□□□ -0.61
MRE11-206ENST00000536144 GNAI2P04899 355 aa11.25□□□□□ -0.61
MRE11-206ENST00000536144 PANK1Q8TE04 598 aa11.25□□□□□ -0.61
MRE11-206ENST00000536144 ANKRD2Q9GZV1 360 aa11.25□□□□□ -0.61
MRE11-206ENST00000536144 ANKIB1Q9P2G1 1089 aa11.25□□□□□ -0.61
MRE11-206ENST00000536144 POLLQ9UGP5 575 aa11.25□□□□□ -0.61
MRE11-206ENST00000536144 LRRFIP2Q9Y608 721 aaKnown RBP11.25□□□□□ -0.61
MRE11-206ENST00000536144 XDHP47989 1333 aa11.25□□□□□ -0.61
MRE11-206ENST00000536144 FER1L6Q2WGJ9 1857 aa11.24□□□□□ -0.61
MRE11-206ENST00000536144 PLIN1O60240 522 aa11.24□□□□□ -0.61
MRE11-206ENST00000536144 ATP2B4P23634 1241 aa11.24□□□□□ -0.61
MRE11-206ENST00000536144 PPP4CP60510 307 aa11.24□□□□□ -0.61
MRE11-206ENST00000536144 KIAA2012Q0VF49 1180 aa11.24□□□□□ -0.61
MRE11-206ENST00000536144 MTX1Q13505 466 aa11.24□□□□□ -0.61
MRE11-206ENST00000536144 TAF7LQ5H9L4 462 aa11.24□□□□□ -0.61
MRE11-206ENST00000536144 LDHAL6AQ6ZMR3 332 aa11.24□□□□□ -0.61
MRE11-206ENST00000536144 ITPRIPQ8IWB1 547 aa11.24□□□□□ -0.61
MRE11-206ENST00000536144 TBC1D16Q8TBP0 767 aa11.24□□□□□ -0.61
MRE11-206ENST00000536144 JDP2Q8WYK2 163 aa11.24□□□□□ -0.61
MRE11-206ENST00000536144 GGA1Q9UJY5 639 aa11.24□□□□□ -0.61
MRE11-206ENST00000536144 HPS5Q9UPZ3 1129 aa11.24□□□□□ -0.61
MRE11-206ENST00000536144 COL4A1P02462 1669 aa11.24□□□□□ -0.61
MRE11-206ENST00000536144 C6orf229H3BNL8 230 aa11.23□□□□□ -0.61
MRE11-206ENST00000536144 FZD9O00144 591 aa11.23□□□□□ -0.61
MRE11-206ENST00000536144 PPIP5K2O43314 1243 aa11.23□□□□□ -0.61
MRE11-206ENST00000536144 DNAJB2P25686 324 aa11.23□□□□□ -0.61
MRE11-206ENST00000536144 RFX5P48382 616 aaPredicted RBP11.23□□□□□ -0.61
MRE11-206ENST00000536144 WASHC4Q2M389 1173 aa11.23□□□□□ -0.61
MRE11-206ENST00000536144 SWT1Q5T5J6 900 aaKnown RBP11.23□□□□□ -0.61
MRE11-206ENST00000536144 LARGE2Q8N3Y3 721 aa11.23□□□□□ -0.61
MRE11-206ENST00000536144 ZNF784Q8NCA9 323 aaPredicted RBP11.23□□□□□ -0.61
MRE11-206ENST00000536144 ZNF594Q96JF6 807 aaPredicted RBP11.23□□□□□ -0.61
MRE11-206ENST00000536144 EYA3Q99504 573 aa11.23□□□□□ -0.61
MRE11-206ENST00000536144 CHMP4BQ9H444 224 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 1725 ms