RNA–Protein interactions for RNA: ENST00000536089.5

MDM2-223, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-223ENST00000536089 CHD1O14646 1710 aa6.32□□□□□ -1.4
MDM2-223ENST00000536089 DNMBPQ6XZF7 1577 aa6.31□□□□□ -1.4
MDM2-223ENST00000536089 LOC102724428A0A0B4J2F2 783 aa6.31□□□□□ -1.4
MDM2-223ENST00000536089 NRLP54845 237 aa6.31□□□□□ -1.4
MDM2-223ENST00000536089 SIK1P57059 783 aa6.31□□□□□ -1.4
MDM2-223ENST00000536089 FAM182BQ5T319 152 aa6.31□□□□□ -1.4
MDM2-223ENST00000536089 COL13A1Q5TAT6 717 aaPredicted RBP6.31□□□□□ -1.4
MDM2-223ENST00000536089 PEAR1Q5VY43 1037 aaPredicted RBP6.31□□□□□ -1.4
MDM2-223ENST00000536089 SYT9Q86SS6 491 aa6.31□□□□□ -1.4
MDM2-223ENST00000536089 ASAP3Q8TDY4 903 aa6.31□□□□□ -1.4
MDM2-223ENST00000536089 ZKSCAN3Q9BRR0 538 aa6.31□□□□□ -1.4
MDM2-223ENST00000536089 TOPBP1Q92547 1522 aa6.3□□□□□ -1.4
MDM2-223ENST00000536089 TMEM238LA0A1B0GVL6 79 aa6.3□□□□□ -1.4
MDM2-223ENST00000536089 FAM177BA6PVY3 158 aa6.3□□□□□ -1.4
MDM2-223ENST00000536089 SHISA8B8ZZ34 492 aa6.3□□□□□ -1.4
MDM2-223ENST00000536089 J3QW42 95 aa6.3□□□□□ -1.4
MDM2-223ENST00000536089 TRPA1O75762 1119 aa6.3□□□□□ -1.4
MDM2-223ENST00000536089 KIF4AO95239 1232 aa6.3□□□□□ -1.4
MDM2-223ENST00000536089 XRCC5P13010 732 aaKnown RBP6.3□□□□□ -1.4
MDM2-223ENST00000536089 ACPPP15309 386 aa6.3□□□□□ -1.4
MDM2-223ENST00000536089 EIF2AK2P19525 551 aaKnown RBP6.3□□□□□ -1.4
MDM2-223ENST00000536089 ST13P50502 369 aaKnown RBP6.3□□□□□ -1.4
MDM2-223ENST00000536089 SF3A1Q15459 793 aaKnown RBP6.3□□□□□ -1.4
MDM2-223ENST00000536089 ZNF394Q53GI3 561 aa6.3□□□□□ -1.4
MDM2-223ENST00000536089 ZNF654Q8IZM8 581 aa6.3□□□□□ -1.4
MDM2-223ENST00000536089 SREK1Q8WXA9 508 aaKnown RBP6.3□□□□□ -1.4
MDM2-223ENST00000536089 DRC1Q96MC2 740 aa6.3□□□□□ -1.4
MDM2-223ENST00000536089 ACBD3Q9H3P7 528 aa6.3□□□□□ -1.4
MDM2-223ENST00000536089 ZFYVE1Q9HBF4 777 aa6.3□□□□□ -1.4
MDM2-223ENST00000536089 INPP5FQ9Y2H2 1132 aa6.3□□□□□ -1.4
MDM2-223ENST00000536089 PCDHGB7Q9Y5F8 929 aa6.3□□□□□ -1.4
MDM2-223ENST00000536089 ARAFP10398 606 aa6.29□□□□□ -1.4
MDM2-223ENST00000536089 PCBP4P57723 403 aaKnown RBP6.29□□□□□ -1.4
MDM2-223ENST00000536089 GPLD1P80108 840 aa6.29□□□□□ -1.4
MDM2-223ENST00000536089 RAD51AP2Q09MP3 1159 aa6.29□□□□□ -1.4
MDM2-223ENST00000536089 CCDC85BQ15834 202 aaPredicted RBP6.29□□□□□ -1.4
MDM2-223ENST00000536089 Q8N3U1 123 aa6.29□□□□□ -1.4
MDM2-223ENST00000536089 DNAJB12Q9NXW2 375 aaKnown RBP6.29□□□□□ -1.4
MDM2-223ENST00000536089 HCN2Q9UL51 889 aa6.29□□□□□ -1.4
MDM2-223ENST00000536089 PDE2AO00408 941 aaPredicted RBP6.28□□□□□ -1.4
MDM2-223ENST00000536089 SMNDC1O75940 238 aaKnown RBP eCLIP6.28□□□□□ -1.41e-7■■□□□ 13.3
MDM2-223ENST00000536089 CPB1P15086 417 aa6.28□□□□□ -1.4
MDM2-223ENST00000536089 CEP135Q66GS9 1140 aa6.28□□□□□ -1.4
MDM2-223ENST00000536089 PRPF40BQ6NWY9 871 aaKnown RBP6.28□□□□□ -1.4
MDM2-223ENST00000536089 TPTE2Q6XPS3 522 aa6.28□□□□□ -1.4
MDM2-223ENST00000536089 LINC00114Q6XXX2 140 aa6.28□□□□□ -1.4
MDM2-223ENST00000536089 FAM35AQ86V20 835 aa6.28□□□□□ -1.4
MDM2-223ENST00000536089 RELL1Q8IUW5 271 aa6.28□□□□□ -1.4
MDM2-223ENST00000536089 CCNJLQ8IV13 435 aa6.28□□□□□ -1.4
MDM2-223ENST00000536089 CEP120Q8N960 986 aa6.28□□□□□ -1.4
MDM2-223ENST00000536089 GLIS3Q8NEA6 775 aa6.28□□□□□ -1.4
MDM2-223ENST00000536089 TRPM4Q8TD43 1214 aa6.28□□□□□ -1.4
MDM2-223ENST00000536089 TCF12Q99081 682 aa6.28□□□□□ -1.4
MDM2-223ENST00000536089 RASSF4Q9H2L5 321 aa6.28□□□□□ -1.4
MDM2-223ENST00000536089 AVENQ9NQS1 362 aaPredicted RBP6.28□□□□□ -1.4
MDM2-223ENST00000536089 DZANK1Q9NVP4 752 aa6.28□□□□□ -1.4
MDM2-223ENST00000536089 GGA1Q9UJY5 639 aa6.28□□□□□ -1.4
MDM2-223ENST00000536089 ZNF608Q9ULD9 1512 aaPredicted RBP6.27□□□□□ -1.41
MDM2-223ENST00000536089 METTL12A8MUP2 240 aa6.27□□□□□ -1.41
MDM2-223ENST00000536089 ZBTB42B2RXF5 422 aa6.27□□□□□ -1.41
MDM2-223ENST00000536089 SIN3BO75182 1162 aa6.27□□□□□ -1.41
MDM2-223ENST00000536089 FBXO24O75426 580 aa6.27□□□□□ -1.41
MDM2-223ENST00000536089 FURINP09958 794 aa6.27□□□□□ -1.41
MDM2-223ENST00000536089 EPXP11678 715 aa6.27□□□□□ -1.41
MDM2-223ENST00000536089 COL8A1P27658 744 aa6.27□□□□□ -1.41
MDM2-223ENST00000536089 ATP11AP98196 1134 aa6.27□□□□□ -1.41
MDM2-223ENST00000536089 MAP3K11Q16584 847 aa6.27□□□□□ -1.41
MDM2-223ENST00000536089 ZNF468Q5VIY5 522 aaPredicted RBP6.27□□□□□ -1.41
MDM2-223ENST00000536089 ELMSAN1Q6PJG2 1045 aa6.27□□□□□ -1.41
MDM2-223ENST00000536089 VPS37DQ86XT2 251 aa6.27□□□□□ -1.41
MDM2-223ENST00000536089 BTBD6Q96KE9 485 aa6.27□□□□□ -1.41
MDM2-223ENST00000536089 PBX4Q9BYU1 374 aa6.27□□□□□ -1.41
MDM2-223ENST00000536089 TANGO6Q9C0B7 1094 aa6.27□□□□□ -1.41
MDM2-223ENST00000536089 CEP44Q9C0F1 390 aa6.27□□□□□ -1.41
MDM2-223ENST00000536089 ABCB6Q9NP58 842 aa6.27□□□□□ -1.41
MDM2-223ENST00000536089 GPN3Q9UHW5 284 aaPredicted RBP6.27□□□□□ -1.41
MDM2-223ENST00000536089 DDX41Q9UJV9 622 aaKnown RBP6.27□□□□□ -1.41
MDM2-223ENST00000536089 PPM1HQ9ULR3 514 aa6.27□□□□□ -1.41
MDM2-223ENST00000536089 TARBP1Q13395 1621 aaKnown RBP6.27□□□□□ -1.41
MDM2-223ENST00000536089 SYNJ1O43426 1573 aa6.27□□□□□ -1.41
MDM2-223ENST00000536089 A0A096LPE4 126 aa6.26□□□□□ -1.41
MDM2-223ENST00000536089 A0A1W2PPZ6 126 aa6.26□□□□□ -1.41
MDM2-223ENST00000536089 MINDY4BA8MYZ0 360 aa6.26□□□□□ -1.41
MDM2-223ENST00000536089 F6X3S4 739 aa6.26□□□□□ -1.41
MDM2-223ENST00000536089 HOXD8P13378 290 aaPredicted RBP6.26□□□□□ -1.41
MDM2-223ENST00000536089 LMNB1P20700 586 aa6.26□□□□□ -1.41
MDM2-223ENST00000536089 ADH6P28332 368 aa6.26□□□□□ -1.41
MDM2-223ENST00000536089 DNAJA1P31689 397 aaKnown RBP6.26□□□□□ -1.41
MDM2-223ENST00000536089 GBP2P32456 591 aaPredicted RBP6.26□□□□□ -1.41
MDM2-223ENST00000536089 GRIA4P48058 902 aa6.26□□□□□ -1.41
MDM2-223ENST00000536089 TNNI2P48788 182 aa6.26□□□□□ -1.41
MDM2-223ENST00000536089 PTPN12Q05209 780 aaKnown RBP6.26□□□□□ -1.41
MDM2-223ENST00000536089 PWP1Q13610 501 aa6.26□□□□□ -1.41
MDM2-223ENST00000536089 SPRED3Q2MJR0 410 aa6.26□□□□□ -1.41
MDM2-223ENST00000536089 TMEM102Q8N9M5 508 aaPredicted RBP6.26□□□□□ -1.41
MDM2-223ENST00000536089 C3orf58Q8NDZ4 430 aa6.26□□□□□ -1.41
MDM2-223ENST00000536089 NXPE3Q969Y0 559 aa6.26□□□□□ -1.41
MDM2-223ENST00000536089 HHIPQ96QV1 700 aa6.26□□□□□ -1.41
MDM2-223ENST00000536089 NOC4LQ9BVI4 516 aaKnown RBP6.26□□□□□ -1.41
MDM2-223ENST00000536089 SPDYE3A6NKU9 549 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms