RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 EXOC6Q8TAG9 804 aa22.11■■□□□ 1.13
DDX55-204ENST00000536079 ADAMTSL1Q8N6G6 1762 aa22.1■■□□□ 1.13
DDX55-204ENST00000536079 ZNF280AP59817 542 aaPredicted RBP22.1■■□□□ 1.13
DDX55-204ENST00000536079 IRX6P78412 446 aaPredicted RBP22.1■■□□□ 1.13
DDX55-204ENST00000536079 CHAF1AQ13111 956 aaPredicted RBP22.1■■□□□ 1.13
DDX55-204ENST00000536079 TNNI3KQ59H18 835 aa22.1■■□□□ 1.13
DDX55-204ENST00000536079 RBM26Q5T8P6 1007 aaKnown RBP22.1■■□□□ 1.13
DDX55-204ENST00000536079 NEUROD6Q96NK8 337 aa22.1■■□□□ 1.13
DDX55-204ENST00000536079 AKAP2Q9Y2D5 859 aa22.1■■□□□ 1.13
DDX55-204ENST00000536079 FPGT-TNNI3KV9GXZ4 949 aa22.1■■□□□ 1.13
DDX55-204ENST00000536079 H7C1D1 291 aa22.09■■□□□ 1.13
DDX55-204ENST00000536079 APBB1O00213 710 aa22.09■■□□□ 1.13
DDX55-204ENST00000536079 CCDC102BQ68D86 513 aa22.09■■□□□ 1.13
DDX55-204ENST00000536079 USP50Q70EL3 339 aaPredicted RBP22.09■■□□□ 1.13
DDX55-204ENST00000536079 KIAA0825Q8IV33 1275 aa22.09■■□□□ 1.13
DDX55-204ENST00000536079 TLR7Q9NYK1 1049 aaKnown RBP22.09■■□□□ 1.13
DDX55-204ENST00000536079 ASTN2O75129 1339 aaPredicted RBP22.08■■□□□ 1.13
DDX55-204ENST00000536079 HMMRO75330 724 aa22.08■■□□□ 1.13
DDX55-204ENST00000536079 USP17L8P0C7I0 530 aa22.08■■□□□ 1.13
DDX55-204ENST00000536079 PNMA8AQ86V59 439 aaPredicted RBP22.08■■□□□ 1.13
DDX55-204ENST00000536079 LDHDQ86WU2 507 aa22.08■■□□□ 1.13
DDX55-204ENST00000536079 EAF2Q96CJ1 260 aaPredicted RBP22.08■■□□□ 1.13
DDX55-204ENST00000536079 CLEC11AQ9Y240 323 aa22.08■■□□□ 1.13
DDX55-204ENST00000536079 PCDHAC2Q9Y5I4 1007 aa22.08■■□□□ 1.13
DDX55-204ENST00000536079 ARAP2Q8WZ64 1704 aa22.07■■□□□ 1.12
DDX55-204ENST00000536079 F8W031 263 aaPredicted RBP22.07■■□□□ 1.12
DDX55-204ENST00000536079 MAP1SQ66K74 1059 aaPredicted RBP22.07■■□□□ 1.12
DDX55-204ENST00000536079 CHADLQ6NUI6 762 aa22.07■■□□□ 1.12
DDX55-204ENST00000536079 SMC1BQ8NDV3 1235 aa22.07■■□□□ 1.12
DDX55-204ENST00000536079 DBNDD2Q9BQY9 259 aa22.07■■□□□ 1.12
DDX55-204ENST00000536079 IL1RAPL2Q9NP60 686 aa22.07■■□□□ 1.12
DDX55-204ENST00000536079 GPR108Q9NPR9 543 aa22.07■■□□□ 1.12
DDX55-204ENST00000536079 FKBP1AP62942 108 aaKnown RBP22.06■■□□□ 1.12
DDX55-204ENST00000536079 KIF4BQ2VIQ3 1234 aa22.06■■□□□ 1.12
DDX55-204ENST00000536079 MFSD14BQ5SR56 506 aa22.06■■□□□ 1.12
DDX55-204ENST00000536079 RHPN1Q8TCX5 695 aa22.06■■□□□ 1.12
DDX55-204ENST00000536079 CCDC8Q9H0W5 538 aaPredicted RBP22.06■■□□□ 1.12
DDX55-204ENST00000536079 MYO3BQ8WXR4 1341 aa22.06■■□□□ 1.12
DDX55-204ENST00000536079 FRAT2O75474 233 aaPredicted RBP22.05■■□□□ 1.12
DDX55-204ENST00000536079 RASGRF1Q13972 1273 aa22.05■■□□□ 1.12
DDX55-204ENST00000536079 MYOZ2Q9NPC6 264 aa22.05■■□□□ 1.12
DDX55-204ENST00000536079 FMR1Q06787 632 aaKnown RBP eCLIP22.04■■□□□ 1.12
DDX55-204ENST00000536079 FSTL1Q12841 308 aa22.04■■□□□ 1.12
DDX55-204ENST00000536079 SCARF1Q14162 830 aa22.04■■□□□ 1.12
DDX55-204ENST00000536079 PI16Q6UXB8 463 aa22.04■■□□□ 1.12
DDX55-204ENST00000536079 DLK2Q6UY11 383 aa22.04■■□□□ 1.12
DDX55-204ENST00000536079 PGAP2Q9UHJ9 254 aa22.04■■□□□ 1.12
DDX55-204ENST00000536079 DBNLQ9UJU6 430 aaKnown RBP22.04■■□□□ 1.12
DDX55-204ENST00000536079 AOX1Q06278 1338 aa22.04■■□□□ 1.12
DDX55-204ENST00000536079 ITGBL1O95965 494 aaPredicted RBP22.03■■□□□ 1.12
DDX55-204ENST00000536079 DCTPP1Q9H773 170 aa22.03■■□□□ 1.12
DDX55-204ENST00000536079 SMARCA5O60264 1052 aaPredicted RBP22.02■■□□□ 1.12
DDX55-204ENST00000536079 NBPF9Q3BBW0 867 aa22.02■■□□□ 1.12
DDX55-204ENST00000536079 HSP90AB4PQ58FF6 505 aa22.02■■□□□ 1.12
DDX55-204ENST00000536079 ERC1Q8IUD2 1116 aa22.02■■□□□ 1.12
DDX55-204ENST00000536079 CNTROBQ8N137 903 aa22.02■■□□□ 1.12
DDX55-204ENST00000536079 ZBED3Q96IU2 234 aaPredicted RBP22.02■■□□□ 1.12
DDX55-204ENST00000536079 BCL11AQ9H165 835 aa22.02■■□□□ 1.12
DDX55-204ENST00000536079 GNL3LQ9NVN8 582 aaKnown RBP22.02■■□□□ 1.12
DDX55-204ENST00000536079 SCAF8Q9UPN6 1271 aaKnown RBP22.02■■□□□ 1.12
DDX55-204ENST00000536079 RAB11FIP3O75154 756 aa22.01■■□□□ 1.11
DDX55-204ENST00000536079 AACSQ86V21 672 aa22.01■■□□□ 1.11
DDX55-204ENST00000536079 KIF1BPQ96EK5 621 aa22.01■■□□□ 1.11
DDX55-204ENST00000536079 TRAF5O00463 557 aa22■■□□□ 1.11
DDX55-204ENST00000536079 ZBTB22O15209 634 aa22■■□□□ 1.11
DDX55-204ENST00000536079 ARID4AP29374 1257 aaPredicted RBP22■■□□□ 1.11
DDX55-204ENST00000536079 MCAMP43121 646 aa22■■□□□ 1.11
DDX55-204ENST00000536079 GORABQ5T7V8 394 aa22■■□□□ 1.11
DDX55-204ENST00000536079 OGFOD1Q8N543 542 aa22■■□□□ 1.11
DDX55-204ENST00000536079 GLIS2Q9BZE0 524 aaPredicted RBP22■■□□□ 1.11
DDX55-204ENST00000536079 HMG20BQ9P0W2 317 aa22■■□□□ 1.11
DDX55-204ENST00000536079 DENND2AQ9ULE3 1009 aa22■■□□□ 1.11
DDX55-204ENST00000536079 TTF2Q9UNY4 1162 aaKnown RBP22■■□□□ 1.11
DDX55-204ENST00000536079 WNT10BO00744 389 aa21.99■■□□□ 1.11
DDX55-204ENST00000536079 PASKQ96RG2 1323 aa21.99■■□□□ 1.11
DDX55-204ENST00000536079 SEMA3EO15041 775 aa21.98■■□□□ 1.11
DDX55-204ENST00000536079 PRDX5P30044 214 aa21.98■■□□□ 1.11
DDX55-204ENST00000536079 CFAP100Q494V2 611 aa21.98■■□□□ 1.11
DDX55-204ENST00000536079 WDR66Q8TBY9 1149 aa21.98■■□□□ 1.11
DDX55-204ENST00000536079 ZC3H15Q8WU90 426 aaKnown RBP21.98■■□□□ 1.11
DDX55-204ENST00000536079 TBC1D22AQ8WUA7 517 aa21.98■■□□□ 1.11
DDX55-204ENST00000536079 SNRKQ9NRH2 765 aa21.98■■□□□ 1.11
DDX55-204ENST00000536079 GGA3Q9NZ52 723 aa21.98■■□□□ 1.11
DDX55-204ENST00000536079 HDAC9Q9UKV0 1011 aa21.98■■□□□ 1.11
DDX55-204ENST00000536079 HTRA3P83110 453 aa21.97■■□□□ 1.11
DDX55-204ENST00000536079 ANGEL2Q5VTE6 544 aaKnown RBP21.97■■□□□ 1.11
DDX55-204ENST00000536079 TBC1D9Q6ZT07 1266 aa21.97■■□□□ 1.11
DDX55-204ENST00000536079 SPATA5Q8NB90 893 aa21.97■■□□□ 1.11
DDX55-204ENST00000536079 PRMT6Q96LA8 375 aaPredicted RBP21.97■■□□□ 1.11
DDX55-204ENST00000536079 ADM5C9JUS6 153 aa21.96■■□□□ 1.11
DDX55-204ENST00000536079 TTC39AQ5SRH9 613 aa21.96■■□□□ 1.11
DDX55-204ENST00000536079 USP48Q86UV5 1035 aa21.96■■□□□ 1.11
DDX55-204ENST00000536079 MTMR14Q8NCE2 650 aa21.96■■□□□ 1.11
DDX55-204ENST00000536079 NDUFB9Q9Y6M9 179 aa21.96■■□□□ 1.11
DDX55-204ENST00000536079 SALL1Q9NSC2 1324 aa21.96■■□□□ 1.11
DDX55-204ENST00000536079 IGHDP01880 384 aa21.95■■□□□ 1.1
DDX55-204ENST00000536079 HSPA6P17066 643 aa21.95■■□□□ 1.1
DDX55-204ENST00000536079 CRKP46108 304 aa21.95■■□□□ 1.1
DDX55-204ENST00000536079 HDAC1Q13547 482 aaPredicted RBP21.95■■□□□ 1.1
DDX55-204ENST00000536079 DLGAP5Q15398 846 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms