RNA–Protein interactions for RNA: ENST00000535731.1

LRP6-202, Transcript of LDL receptor related protein 6, humanhuman

TSL 3

Gene LRP6, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-202ENST00000535731 NBPF11Q86T75 865 aa25.06■■□□□ 1.6
LRP6-202ENST00000535731 ANKRD13AQ8IZ07 590 aa25.06■■□□□ 1.6
LRP6-202ENST00000535731 PI4KAP1Q8N8J0 262 aa25.06■■□□□ 1.6
LRP6-202ENST00000535731 MPHOSPH8Q99549 860 aa25.06■■□□□ 1.6
LRP6-202ENST00000535731 COLQQ9Y215 455 aaPredicted RBP25.06■■□□□ 1.6
LRP6-202ENST00000535731 H7C1W4 665 aa25.05■■□□□ 1.6
LRP6-202ENST00000535731 KCNJ4P48050 445 aa25.05■■□□□ 1.6
LRP6-202ENST00000535731 NBPF12Q5TAG4 269 aaPredicted RBP25.05■■□□□ 1.6
LRP6-202ENST00000535731 ZNF333Q96JL9 665 aa25.05■■□□□ 1.6
LRP6-202ENST00000535731 MYBBP1AQ9BQG0 1328 aaKnown RBP25.05■■□□□ 1.6
LRP6-202ENST00000535731 ITGA6P23229 1130 aa25.04■■□□□ 1.6
LRP6-202ENST00000535731 CFAP100Q494V2 611 aa25.04■■□□□ 1.6
LRP6-202ENST00000535731 CERS5Q8N5B7 392 aa25.04■■□□□ 1.6
LRP6-202ENST00000535731 SSC5DA1L4H1 1573 aa25.04■■□□□ 1.6
LRP6-202ENST00000535731 CLRN2A0PK11 232 aa25.03■■□□□ 1.6
LRP6-202ENST00000535731 CAP1Q01518 475 aa25.03■■□□□ 1.6
LRP6-202ENST00000535731 PRMT6Q96LA8 375 aaPredicted RBP25.03■■□□□ 1.6
LRP6-202ENST00000535731 PCDHAC2Q9Y5I4 1007 aa25.03■■□□□ 1.6
LRP6-202ENST00000535731 RBBP6Q7Z6E9 1792 aaKnown RBP25.03■■□□□ 1.6
LRP6-202ENST00000535731 SPDYE2BA6NHP3 402 aa25.02■■□□□ 1.6
LRP6-202ENST00000535731 NEURL1BA8MQ27 555 aa25.02■■□□□ 1.6
LRP6-202ENST00000535731 SPDYE6P0CI01 402 aa25.02■■□□□ 1.6
LRP6-202ENST00000535731 CHRNDQ07001 517 aa25.02■■□□□ 1.6
LRP6-202ENST00000535731 CWF19L2Q2TBE0 894 aaKnown RBP25.02■■□□□ 1.6
LRP6-202ENST00000535731 UBE3BQ7Z3V4 1068 aa25.02■■□□□ 1.6
LRP6-202ENST00000535731 PLA2G12BQ9BX93 195 aa25.02■■□□□ 1.6
LRP6-202ENST00000535731 VEZTQ9HBM0 779 aa25.02■■□□□ 1.6
LRP6-202ENST00000535731 FKBP1AP62942 108 aaKnown RBP25.01■■□□□ 1.59
LRP6-202ENST00000535731 SLC9C1Q4G0N8 1177 aa25.01■■□□□ 1.59
LRP6-202ENST00000535731 C15orf52Q6ZUT6 534 aaKnown RBP25.01■■□□□ 1.59
LRP6-202ENST00000535731 F8W031 263 aaPredicted RBP25■■□□□ 1.59
LRP6-202ENST00000535731 CSF1RP07333 972 aa25■■□□□ 1.59
LRP6-202ENST00000535731 RASA3Q14644 834 aa25■■□□□ 1.59
LRP6-202ENST00000535731 SLC4A8Q2Y0W8 1093 aa25■■□□□ 1.59
LRP6-202ENST00000535731 MS4A4AQ96JQ5 239 aa25■■□□□ 1.59
LRP6-202ENST00000535731 OPTNQ96CV9 577 aa24.99■■□□□ 1.59
LRP6-202ENST00000535731 ZFYVE28Q9HCC9 887 aa24.99■■□□□ 1.59
LRP6-202ENST00000535731 PTCH2Q9Y6C5 1203 aa24.99■■□□□ 1.59
LRP6-202ENST00000535731 IL1R1P14778 569 aa24.98■■□□□ 1.59
LRP6-202ENST00000535731 ELP3Q9H9T3 547 aa24.98■■□□□ 1.59
LRP6-202ENST00000535731 CENPFP49454 3210 aa24.98■■□□□ 1.59
LRP6-202ENST00000535731 IRS2Q9Y4H2 1338 aa24.97■■□□□ 1.59
LRP6-202ENST00000535731 APAF1O14727 1248 aa24.97■■□□□ 1.59
LRP6-202ENST00000535731 RBM5P52756 815 aaKnown RBP eCLIP24.97■■□□□ 1.59
LRP6-202ENST00000535731 TSPYL6Q8N831 410 aa24.97■■□□□ 1.59
LRP6-202ENST00000535731 LAMB1P07942 1786 aa24.96■■□□□ 1.59
LRP6-202ENST00000535731 SNAP23O00161 211 aa24.96■■□□□ 1.59
LRP6-202ENST00000535731 GCKRQ14397 625 aa24.96■■□□□ 1.59
LRP6-202ENST00000535731 TAF1CQ15572 869 aaPredicted RBP24.96■■□□□ 1.59
LRP6-202ENST00000535731 ZNF804AQ7Z570 1209 aa24.96■■□□□ 1.59
LRP6-202ENST00000535731 OTUD5Q96G74 571 aa24.96■■□□□ 1.59
LRP6-202ENST00000535731 STK31Q9BXU1 1019 aa24.96■■□□□ 1.59
LRP6-202ENST00000535731 SPEF2Q9C093 1822 aa24.96■■□□□ 1.59
LRP6-202ENST00000535731 MYH3P11055 1940 aa24.95■■□□□ 1.58
LRP6-202ENST00000535731 H0YGN5 161 aa24.95■■□□□ 1.58
LRP6-202ENST00000535731 TAF5LO75529 589 aa24.95■■□□□ 1.58
LRP6-202ENST00000535731 GTF2A2P52657 109 aa24.95■■□□□ 1.58
LRP6-202ENST00000535731 TNFAIP1Q13829 316 aa24.95■■□□□ 1.58
LRP6-202ENST00000535731 BRI3BPQ8WY22 251 aa24.95■■□□□ 1.58
LRP6-202ENST00000535731 AOX1Q06278 1338 aa24.94■■□□□ 1.58
LRP6-202ENST00000535731 ANKRD18BA2A2Z9 1011 aa24.94■■□□□ 1.58
LRP6-202ENST00000535731 CASP7P55210 303 aa24.94■■□□□ 1.58
LRP6-202ENST00000535731 HELBQ8NG08 1087 aaPredicted RBP24.94■■□□□ 1.58
LRP6-202ENST00000535731 CCL15-CCL14A0A0B4J2E2 113 aa24.93■■□□□ 1.58
LRP6-202ENST00000535731 CCL15Q16663 113 aa24.93■■□□□ 1.58
LRP6-202ENST00000535731 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.93■■□□□ 1.58
LRP6-202ENST00000535731 MYH16Q9H6N6 1097 aa24.92■■□□□ 1.58
LRP6-202ENST00000535731 ZNF70Q9UC06 446 aaPredicted RBP24.92■■□□□ 1.58
LRP6-202ENST00000535731 WDHD1O75717 1129 aaPredicted RBP24.91■■□□□ 1.58
LRP6-202ENST00000535731 MAP3K9P80192 1104 aa24.91■■□□□ 1.58
LRP6-202ENST00000535731 SPDYE2Q495Y8 402 aa24.91■■□□□ 1.58
LRP6-202ENST00000535731 G2E3Q7L622 706 aa24.91■■□□□ 1.58
LRP6-202ENST00000535731 BRCA2P51587 3418 aa24.9■■□□□ 1.58
LRP6-202ENST00000535731 MYCP01106 439 aaPredicted RBP24.9■■□□□ 1.58
LRP6-202ENST00000535731 KIF22Q14807 665 aa24.9■■□□□ 1.58
LRP6-202ENST00000535731 FAM43AQ8N2R8 423 aa24.9■■□□□ 1.58
LRP6-202ENST00000535731 CNKSR2Q8WXI2 1034 aa24.9■■□□□ 1.58
LRP6-202ENST00000535731 JAG2Q9Y219 1238 aa24.9■■□□□ 1.58
LRP6-202ENST00000535731 SLC4A2P04920 1241 aa24.89■■□□□ 1.58
LRP6-202ENST00000535731 IFIT5Q13325 482 aaKnown RBP24.89■■□□□ 1.58
LRP6-202ENST00000535731 SH3TC2Q8TF17 1288 aa24.89■■□□□ 1.58
LRP6-202ENST00000535731 TEPSINQ96N21 525 aa24.89■■□□□ 1.58
LRP6-202ENST00000535731 TDRD3Q9H7E2 651 aaKnown RBP24.89■■□□□ 1.58
LRP6-202ENST00000535731 SERPINA10Q9UK55 444 aa24.89■■□□□ 1.58
LRP6-202ENST00000535731 ECM29Q5VYK3 1845 aa24.89■■□□□ 1.57
LRP6-202ENST00000535731 GNRH1P01148 92 aa24.88■■□□□ 1.57
LRP6-202ENST00000535731 VGLL4Q14135 290 aa24.88■■□□□ 1.57
LRP6-202ENST00000535731 CSADQ9Y600 493 aa24.88■■□□□ 1.57
LRP6-202ENST00000535731 FAM205AQ6ZU69 1335 aa24.87■■□□□ 1.57
LRP6-202ENST00000535731 TLR2O60603 784 aa24.87■■□□□ 1.57
LRP6-202ENST00000535731 PRMT2P55345 433 aa24.87■■□□□ 1.57
LRP6-202ENST00000535731 CHRDL2Q6WN34 429 aa24.87■■□□□ 1.57
LRP6-202ENST00000535731 LINS1Q8NG48 757 aa24.87■■□□□ 1.57
LRP6-202ENST00000535731 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.87■■□□□ 1.57
LRP6-202ENST00000535731 TNNI2P48788 182 aa24.86■■□□□ 1.57
LRP6-202ENST00000535731 LACTBP83111 547 aaPredicted RBP24.86■■□□□ 1.57
LRP6-202ENST00000535731 DZIP1LQ8IYY4 767 aaKnown RBP24.86■■□□□ 1.57
LRP6-202ENST00000535731 ZCCHC17Q9NP64 241 aaKnown RBP24.86■■□□□ 1.57
LRP6-202ENST00000535731 TTF2Q9UNY4 1162 aaKnown RBP24.86■■□□□ 1.57
LRP6-202ENST00000535731 TCP10L2B9ZVM9 353 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms