RNA–Protein interactions for RNA: ENST00000535359.5

AP3B2-203, Transcript of adaptor related protein complex 3 subunit beta 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene AP3B2, Length 3,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B2-203ENST00000535359 NIP7Q9Y221 180 aaKnown RBP eCLIP13.22□□□□□ -0.29
AP3B2-203ENST00000535359 AFDNP55196 1824 aaKnown RBP13.21□□□□□ -0.29
AP3B2-203ENST00000535359 ZNF165P49910 485 aa13.21□□□□□ -0.29
AP3B2-203ENST00000535359 CEBPZQ03701 1054 aaKnown RBP13.21□□□□□ -0.29
AP3B2-203ENST00000535359 NAA30Q147X3 362 aaPredicted RBP13.21□□□□□ -0.29
AP3B2-203ENST00000535359 ZSCAN25Q6NSZ9 544 aa13.21□□□□□ -0.29
AP3B2-203ENST00000535359 SMIM5Q71RC9 77 aa13.21□□□□□ -0.29
AP3B2-203ENST00000535359 DBNDD2Q9BQY9 259 aa13.21□□□□□ -0.29
AP3B2-203ENST00000535359 CTIFO43310 598 aaKnown RBP13.21□□□□□ -0.3
AP3B2-203ENST00000535359 TIMM10P62072 90 aa13.21□□□□□ -0.3
AP3B2-203ENST00000535359 LINC00116Q8NCU8 138 aa13.21□□□□□ -0.3
AP3B2-203ENST00000535359 ZFP91Q96JP5 570 aaPredicted RBP13.21□□□□□ -0.3
AP3B2-203ENST00000535359 CEP126Q9P2H0 1117 aa13.21□□□□□ -0.3
AP3B2-203ENST00000535359 TNNT1P13805 278 aa13.2□□□□□ -0.3
AP3B2-203ENST00000535359 RNF20Q5VTR2 975 aa13.2□□□□□ -0.3
AP3B2-203ENST00000535359 DDX19AQ9NUU7 478 aaKnown RBP13.2□□□□□ -0.3
AP3B2-203ENST00000535359 NCBP1Q09161 790 aaKnown RBP13.2□□□□□ -0.3
AP3B2-203ENST00000535359 ATG9AQ7Z3C6 839 aa13.2□□□□□ -0.3
AP3B2-203ENST00000535359 GTPBP4Q9BZE4 634 aaKnown RBP13.2□□□□□ -0.3
AP3B2-203ENST00000535359 CCNL1Q9UK58 526 aaPredicted RBP13.2□□□□□ -0.3
AP3B2-203ENST00000535359 UBN2Q6ZU65 1347 aa13.2□□□□□ -0.3
AP3B2-203ENST00000535359 CCDC144BQ3MJ40 725 aa13.2□□□□□ -0.3
AP3B2-203ENST00000535359 BICDL1Q6ZP65 573 aa13.2□□□□□ -0.3
AP3B2-203ENST00000535359 PLA2G4DQ86XP0 818 aa13.2□□□□□ -0.3
AP3B2-203ENST00000535359 CCDC144CPQ8IYA2 1237 aa13.2□□□□□ -0.3
AP3B2-203ENST00000535359 CACTINQ8WUQ7 758 aaKnown RBP13.2□□□□□ -0.3
AP3B2-203ENST00000535359 ZNF592Q92610 1267 aa13.2□□□□□ -0.3
AP3B2-203ENST00000535359 DNAJC2Q99543 621 aaKnown RBP13.2□□□□□ -0.3
AP3B2-203ENST00000535359 GREM2Q9H772 168 aa13.2□□□□□ -0.3
AP3B2-203ENST00000535359 CLIP2Q9UDT6 1046 aa13.2□□□□□ -0.3
AP3B2-203ENST00000535359 HIP1O00291 1037 aa13.19□□□□□ -0.3
AP3B2-203ENST00000535359 ITGA6P23229 1130 aa13.19□□□□□ -0.3
AP3B2-203ENST00000535359 ZNF34Q8IZ26 560 aa13.19□□□□□ -0.3
AP3B2-203ENST00000535359 BRF1Q92994 677 aa13.19□□□□□ -0.3
AP3B2-203ENST00000535359 NDUFB9Q9Y6M9 179 aa13.19□□□□□ -0.3
AP3B2-203ENST00000535359 WNK3Q9BYP7 1800 aa13.19□□□□□ -0.3
AP3B2-203ENST00000535359 CAMTA2O94983 1202 aa13.19□□□□□ -0.3
AP3B2-203ENST00000535359 ANKRD1Q15327 319 aa13.19□□□□□ -0.3
AP3B2-203ENST00000535359 SUSD4Q5VX71 490 aa13.19□□□□□ -0.3
AP3B2-203ENST00000535359 LDHAL6AQ6ZMR3 332 aa13.19□□□□□ -0.3
AP3B2-203ENST00000535359 TTLL11Q8NHH1 800 aa13.19□□□□□ -0.3
AP3B2-203ENST00000535359 TDRD7Q8NHU6 1098 aaKnown RBP13.19□□□□□ -0.3
AP3B2-203ENST00000535359 A0A087WWV3 80 aa13.19□□□□□ -0.3
AP3B2-203ENST00000535359 CTSWP56202 376 aa13.19□□□□□ -0.3
AP3B2-203ENST00000535359 ARID5BQ14865 1188 aa13.19□□□□□ -0.3
AP3B2-203ENST00000535359 TPD52L1Q16890 204 aaPredicted RBP13.19□□□□□ -0.3
AP3B2-203ENST00000535359 GORABQ5T7V8 394 aa13.19□□□□□ -0.3
AP3B2-203ENST00000535359 UTP14AQ9BVJ6 771 aaKnown RBP13.19□□□□□ -0.3
AP3B2-203ENST00000535359 ZNF652Q9Y2D9 606 aa13.19□□□□□ -0.3
AP3B2-203ENST00000535359 SH3TC1Q8TE82 1336 aa13.18□□□□□ -0.3
AP3B2-203ENST00000535359 CHGBP05060 677 aa13.18□□□□□ -0.3
AP3B2-203ENST00000535359 HSP90B1P14625 803 aaKnown RBP13.18□□□□□ -0.3
AP3B2-203ENST00000535359 LRRC2Q9BYS8 371 aa13.18□□□□□ -0.3
AP3B2-203ENST00000535359 CNNM1Q9NRU3 951 aa13.18□□□□□ -0.3
AP3B2-203ENST00000535359 ANKRD18BA2A2Z9 1011 aa13.18□□□□□ -0.3
AP3B2-203ENST00000535359 GNPATO15228 680 aa13.18□□□□□ -0.3
AP3B2-203ENST00000535359 PLA2G12BQ9BX93 195 aa13.18□□□□□ -0.3
AP3B2-203ENST00000535359 SMTNL1A8MU46 457 aa13.17□□□□□ -0.3
AP3B2-203ENST00000535359 H3BQV1 296 aa13.17□□□□□ -0.3
AP3B2-203ENST00000535359 PDE8AO60658 829 aa13.17□□□□□ -0.3
AP3B2-203ENST00000535359 CSF1RP07333 972 aa13.17□□□□□ -0.3
AP3B2-203ENST00000535359 IFFO2Q5TF58 517 aa13.17□□□□□ -0.3
AP3B2-203ENST00000535359 RBM43Q6ZSC3 357 aaKnown RBP13.17□□□□□ -0.3
AP3B2-203ENST00000535359 CDHR2Q9BYE9 1310 aa13.17□□□□□ -0.3
AP3B2-203ENST00000535359 A0A1B0GUL7 405 aa13.17□□□□□ -0.3
AP3B2-203ENST00000535359 BRD2P25440 801 aaKnown RBP13.17□□□□□ -0.3
AP3B2-203ENST00000535359 CCDC129Q6ZRS4 1044 aa13.17□□□□□ -0.3
AP3B2-203ENST00000535359 EP400Q96L91 3159 aa13.17□□□□□ -0.3
AP3B2-203ENST00000535359 PPFIA3O75145 1194 aa13.17□□□□□ -0.3
AP3B2-203ENST00000535359 RESTQ13127 1097 aa13.17□□□□□ -0.3
AP3B2-203ENST00000535359 METTL24Q5JXM2 366 aa13.17□□□□□ -0.3
AP3B2-203ENST00000535359 C11orf57Q6ZUT1 292 aaPredicted RBP13.17□□□□□ -0.3
AP3B2-203ENST00000535359 FTOQ9C0B1 505 aaKnown RBP eCLIP13.17□□□□□ -0.3
AP3B2-203ENST00000535359 MED23Q9ULK4 1368 aa13.17□□□□□ -0.3
AP3B2-203ENST00000535359 PARP10Q53GL7 1025 aa13.16□□□□□ -0.3
AP3B2-203ENST00000535359 CCDC112Q8NEF3 446 aa13.16□□□□□ -0.3
AP3B2-203ENST00000535359 TAF5LO75529 589 aa13.16□□□□□ -0.3
AP3B2-203ENST00000535359 CIAO1O76071 339 aa13.16□□□□□ -0.3
AP3B2-203ENST00000535359 ATP5JP18859 108 aa13.16□□□□□ -0.3
AP3B2-203ENST00000535359 FBXW7Q969H0 707 aa13.16□□□□□ -0.3
AP3B2-203ENST00000535359 NUP188Q5SRE5 1749 aa13.16□□□□□ -0.3
AP3B2-203ENST00000535359 USP27XA6NNY8 438 aa13.16□□□□□ -0.3
AP3B2-203ENST00000535359 GOLGA6L19H0YKK7 550 aa13.16□□□□□ -0.3
AP3B2-203ENST00000535359 Q6ZUG5 572 aa13.16□□□□□ -0.3
AP3B2-203ENST00000535359 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.16□□□□□ -0.3
AP3B2-203ENST00000535359 GTF3C6Q969F1 213 aa13.16□□□□□ -0.3
AP3B2-203ENST00000535359 TAF3Q5VWG9 929 aa13.15□□□□□ -0.3
AP3B2-203ENST00000535359 DDX46Q7L014 1031 aaKnown RBP13.15□□□□□ -0.3
AP3B2-203ENST00000535359 SEC62Q99442 399 aaKnown RBP13.15□□□□□ -0.3
AP3B2-203ENST00000535359 ZPR1O75312 459 aa13.15□□□□□ -0.3
AP3B2-203ENST00000535359 SNRKQ9NRH2 765 aa13.15□□□□□ -0.3
AP3B2-203ENST00000535359 RTCBQ9Y3I0 505 aaKnown RBP13.15□□□□□ -0.3
AP3B2-203ENST00000535359 ONECUT3O60422 494 aaPredicted RBP13.14□□□□□ -0.31
AP3B2-203ENST00000535359 NEK1Q96PY6 1258 aa13.14□□□□□ -0.31
AP3B2-203ENST00000535359 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.14□□□□□ -0.31
AP3B2-203ENST00000535359 AKAP2Q9Y2D5 859 aa13.14□□□□□ -0.31
AP3B2-203ENST00000535359 V9GYY5 206 aaPredicted RBP13.14□□□□□ -0.31
AP3B2-203ENST00000535359 DHX37Q8IY37 1157 aaKnown RBP13.14□□□□□ -0.31
AP3B2-203ENST00000535359 ERCC4Q92889 916 aaPredicted RBP13.14□□□□□ -0.31
AP3B2-203ENST00000535359 HMG20BQ9P0W2 317 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms