RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 NSUN3Q9H649 340 aaKnown RBP2.32□□□□□ -2.04
COPB1-212ENST00000534771 SRA1Q9HD15 236 aaKnown RBP2.32□□□□□ -2.04
COPB1-212ENST00000534771 KCNK4Q9NYG8 393 aa2.32□□□□□ -2.04
COPB1-212ENST00000534771 RBM19Q9Y4C8 960 aaKnown RBP2.32□□□□□ -2.04
COPB1-212ENST00000534771 ADAMTS20P59510 1910 aa2.32□□□□□ -2.04
COPB1-212ENST00000534771 USP17L5A8MUK1 530 aa2.31□□□□□ -2.04
COPB1-212ENST00000534771 C21orf2O43822 256 aa2.31□□□□□ -2.04
COPB1-212ENST00000534771 SASH3O75995 380 aa2.31□□□□□ -2.04
COPB1-212ENST00000534771 MED14OSP0DP75 135 aa2.31□□□□□ -2.04
COPB1-212ENST00000534771 GDF5P43026 501 aa2.31□□□□□ -2.04
COPB1-212ENST00000534771 CLDN10P78369 228 aa2.31□□□□□ -2.04
COPB1-212ENST00000534771 GPLD1P80108 840 aa2.31□□□□□ -2.04
COPB1-212ENST00000534771 MLLT1Q03111 559 aaPredicted RBP2.31□□□□□ -2.04
COPB1-212ENST00000534771 SGO2Q562F6 1265 aa2.31□□□□□ -2.04
COPB1-212ENST00000534771 DUSP27Q5VZP5 1158 aa2.31□□□□□ -2.04
COPB1-212ENST00000534771 HFE2Q6ZVN8 426 aa2.31□□□□□ -2.04
COPB1-212ENST00000534771 KRT25Q7Z3Z0 450 aa2.31□□□□□ -2.04
COPB1-212ENST00000534771 ZNF575Q86XF7 245 aa2.31□□□□□ -2.04
COPB1-212ENST00000534771 OGFOD1Q8N543 542 aa2.31□□□□□ -2.04
COPB1-212ENST00000534771 TSEN2Q8NCE0 465 aaKnown RBP2.31□□□□□ -2.04
COPB1-212ENST00000534771 SCG3Q8WXD2 468 aaKnown RBP2.31□□□□□ -2.04
COPB1-212ENST00000534771 IFT43Q96FT9 208 aa2.31□□□□□ -2.04
COPB1-212ENST00000534771 BCANQ96GW7 911 aa2.31□□□□□ -2.04
COPB1-212ENST00000534771 TBC1D32Q96NH3 1257 aa2.31□□□□□ -2.04
COPB1-212ENST00000534771 MKRN1Q9UHC7 482 aaKnown RBP2.31□□□□□ -2.04
COPB1-212ENST00000534771 DMGDHQ9UI17 866 aaKnown RBP2.31□□□□□ -2.04
COPB1-212ENST00000534771 PALD1Q9ULE6 856 aa2.31□□□□□ -2.04
COPB1-212ENST00000534771 KIAA1024Q9UPX6 916 aa2.31□□□□□ -2.04
COPB1-212ENST00000534771 HIF3AQ9Y2N7 669 aa2.31□□□□□ -2.04
COPB1-212ENST00000534771 LOC102724428A0A0B4J2F2 783 aa2.3□□□□□ -2.04
COPB1-212ENST00000534771 TGFBR3LH3BV60 316 aa2.3□□□□□ -2.04
COPB1-212ENST00000534771 J3QW42 95 aa2.3□□□□□ -2.04
COPB1-212ENST00000534771 SASH1O94885 1247 aa2.3□□□□□ -2.04
COPB1-212ENST00000534771 EGFRP00533 1210 aa2.3□□□□□ -2.04
COPB1-212ENST00000534771 RARAP10276 462 aa2.3□□□□□ -2.04
COPB1-212ENST00000534771 EIF2AK2P19525 551 aaKnown RBP2.3□□□□□ -2.04
COPB1-212ENST00000534771 INPP5BP32019 993 aa2.3□□□□□ -2.04
COPB1-212ENST00000534771 CD68P34810 354 aaPredicted RBP2.3□□□□□ -2.04
COPB1-212ENST00000534771 CD96P40200 585 aa2.3□□□□□ -2.04
COPB1-212ENST00000534771 SIK1P57059 783 aa2.3□□□□□ -2.04
COPB1-212ENST00000534771 CSRP2Q16527 193 aa2.3□□□□□ -2.04
COPB1-212ENST00000534771 DUOXA2Q1HG44 320 aa2.3□□□□□ -2.04
COPB1-212ENST00000534771 PLEKHM2Q8IWE5 1019 aa2.3□□□□□ -2.04
COPB1-212ENST00000534771 HINFPQ9BQA5 517 aa2.3□□□□□ -2.04
COPB1-212ENST00000534771 ADAM19Q9H013 955 aa2.3□□□□□ -2.04
COPB1-212ENST00000534771 RBSNQ9H1K0 784 aa2.3□□□□□ -2.04
COPB1-212ENST00000534771 ZFATQ9P243 1243 aa2.3□□□□□ -2.04
COPB1-212ENST00000534771 BCS1LQ9Y276 419 aa2.3□□□□□ -2.04
COPB1-212ENST00000534771 USP17L3A6NCW0 530 aa2.29□□□□□ -2.04
COPB1-212ENST00000534771 USP17L4A6NCW7 530 aa2.29□□□□□ -2.04
COPB1-212ENST00000534771 GAS2O43903 313 aaKnown RBP2.29□□□□□ -2.04
COPB1-212ENST00000534771 MICAL2O94851 1124 aa2.29□□□□□ -2.04
COPB1-212ENST00000534771 DKK1O94907 266 aa2.29□□□□□ -2.04
COPB1-212ENST00000534771 GHRHP01286 108 aa2.29□□□□□ -2.04
COPB1-212ENST00000534771 GLI1P08151 1106 aa2.29□□□□□ -2.04
COPB1-212ENST00000534771 IDH3AP50213 366 aa2.29□□□□□ -2.04
COPB1-212ENST00000534771 ARSDP51689 593 aa2.29□□□□□ -2.04
COPB1-212ENST00000534771 NRLP54845 237 aa2.29□□□□□ -2.04
COPB1-212ENST00000534771 SEC13P55735 322 aa2.29□□□□□ -2.04
COPB1-212ENST00000534771 PAOXQ6QHF9 649 aa2.29□□□□□ -2.04
COPB1-212ENST00000534771 USP17L2Q6R6M4 530 aa2.29□□□□□ -2.04
COPB1-212ENST00000534771 USP17L1Q7RTZ2 530 aa2.29□□□□□ -2.04
COPB1-212ENST00000534771 SIX5Q8N196 739 aa2.29□□□□□ -2.04
COPB1-212ENST00000534771 CACTIN-AS1Q8N1I8 211 aa2.29□□□□□ -2.04
COPB1-212ENST00000534771 PLD4Q96BZ4 506 aa2.29□□□□□ -2.04
COPB1-212ENST00000534771 MUC3BQ9H195 1237 aa2.29□□□□□ -2.04
COPB1-212ENST00000534771 TLR7Q9NYK1 1049 aaKnown RBP2.29□□□□□ -2.04
COPB1-212ENST00000534771 PPME1Q9Y570 386 aa2.29□□□□□ -2.04
COPB1-212ENST00000534771 FAM95CA0A1B0GW59 222 aa2.28□□□□□ -2.04
COPB1-212ENST00000534771 ATP9BO43861 1147 aa2.28□□□□□ -2.04
COPB1-212ENST00000534771 PSAPP07602 524 aa2.28□□□□□ -2.04
COPB1-212ENST00000534771 RASA1P20936 1047 aa2.28□□□□□ -2.04
COPB1-212ENST00000534771 GLDCP23378 1020 aa2.28□□□□□ -2.04
COPB1-212ENST00000534771 KRTAP10-6P60371 365 aaPredicted RBP2.28□□□□□ -2.04
COPB1-212ENST00000534771 C11orf91Q3C1V1 193 aa2.28□□□□□ -2.04
COPB1-212ENST00000534771 TMEM67Q5HYA8 995 aa2.28□□□□□ -2.04
COPB1-212ENST00000534771 HDGFL1Q5TGJ6 251 aa2.28□□□□□ -2.04
COPB1-212ENST00000534771 FEZF2Q8TBJ5 459 aa2.28□□□□□ -2.04
COPB1-212ENST00000534771 VWCEQ96DN2 955 aa2.28□□□□□ -2.04
COPB1-212ENST00000534771 ZNF594Q96JF6 807 aaPredicted RBP2.28□□□□□ -2.04
COPB1-212ENST00000534771 DCP1AQ9NPI6 582 aaPredicted RBP2.28□□□□□ -2.04
COPB1-212ENST00000534771 KLK14Q9P0G3 267 aa2.28□□□□□ -2.04
COPB1-212ENST00000534771 COG6Q9Y2V7 657 aa2.28□□□□□ -2.04
COPB1-212ENST00000534771 LINC01387J3KSC0 135 aa2.27□□□□□ -2.05
COPB1-212ENST00000534771 OPLAHO14841 1288 aa2.27□□□□□ -2.05
COPB1-212ENST00000534771 XYLBO75191 536 aa2.27□□□□□ -2.05
COPB1-212ENST00000534771 IGFBP4P22692 258 aa2.27□□□□□ -2.05
COPB1-212ENST00000534771 DGKZQ13574 1117 aa2.27□□□□□ -2.05
COPB1-212ENST00000534771 MCM6Q14566 821 aa2.27□□□□□ -2.05
COPB1-212ENST00000534771 TCERG1LQ5VWI1 586 aa2.27□□□□□ -2.05
COPB1-212ENST00000534771 ANKRD34AQ69YU3 496 aa2.27□□□□□ -2.05
COPB1-212ENST00000534771 ZAR1Q86SH2 424 aa2.27□□□□□ -2.05
COPB1-212ENST00000534771 CMTR1Q8N1G2 835 aaKnown RBP2.27□□□□□ -2.05
COPB1-212ENST00000534771 MISP3Q96FF7 219 aa2.27□□□□□ -2.05
COPB1-212ENST00000534771 PRDM7Q9NQW5 492 aa2.27□□□□□ -2.05
COPB1-212ENST00000534771 UTP3Q9NQZ2 479 aaKnown RBP eCLIP2.27□□□□□ -2.057e-6■■■■■ 74.5
COPB1-212ENST00000534771 USP20Q9Y2K6 914 aa2.27□□□□□ -2.05
COPB1-212ENST00000534771 RTCBQ9Y3I0 505 aaKnown RBP2.27□□□□□ -2.05
COPB1-212ENST00000534771 CYR61O00622 381 aa2.26□□□□□ -2.05
COPB1-212ENST00000534771 DDX3YO15523 660 aaKnown RBP2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms