RNA–Protein interactions for RNA: ENST00000534548.6

NCAPD3-214, Transcript of non-SMC condensin II complex subunit D3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NCAPD3, Length 5,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-214ENST00000534548 NEO1Q92859 1461 aa11.65□□□□□ -0.54
NCAPD3-214ENST00000534548 AK9Q5TCS8 1911 aa11.65□□□□□ -0.54
NCAPD3-214ENST00000534548 RAD51AP2Q09MP3 1159 aa11.65□□□□□ -0.54
NCAPD3-214ENST00000534548 TDRD12Q587J7 1177 aaKnown RBP11.65□□□□□ -0.54
NCAPD3-214ENST00000534548 RPAINQ86UA6 219 aa11.65□□□□□ -0.54
NCAPD3-214ENST00000534548 USHBP1Q8N6Y0 703 aa11.65□□□□□ -0.54
NCAPD3-214ENST00000534548 DIP2CQ9Y2E4 1556 aa11.65□□□□□ -0.55
NCAPD3-214ENST00000534548 CEBPAP49715 358 aaPredicted RBP11.64□□□□□ -0.55
NCAPD3-214ENST00000534548 E2F4Q16254 413 aa11.64□□□□□ -0.55
NCAPD3-214ENST00000534548 LRCH2Q5VUJ6 765 aa11.64□□□□□ -0.55
NCAPD3-214ENST00000534548 GCOM1H8Y6P7 765 aaPredicted RBP11.64□□□□□ -0.55
NCAPD3-214ENST00000534548 MYZAPP0CAP1 466 aa11.64□□□□□ -0.55
NCAPD3-214ENST00000534548 ARHGAP25P42331 645 aa11.64□□□□□ -0.55
NCAPD3-214ENST00000534548 CCDC96Q2M329 555 aa11.64□□□□□ -0.55
NCAPD3-214ENST00000534548 VPS37DQ86XT2 251 aa11.64□□□□□ -0.55
NCAPD3-214ENST00000534548 CCDC82Q8N4S0 544 aa11.64□□□□□ -0.55
NCAPD3-214ENST00000534548 PDE11AQ9HCR9 933 aa11.64□□□□□ -0.55
NCAPD3-214ENST00000534548 NAA30Q147X3 362 aaPredicted RBP11.64□□□□□ -0.55
NCAPD3-214ENST00000534548 CCDC57Q2TAC2 916 aa11.64□□□□□ -0.55
NCAPD3-214ENST00000534548 NACAP1Q9BZK3 213 aa11.64□□□□□ -0.55
NCAPD3-214ENST00000534548 RBM28Q9NW13 759 aaKnown RBP11.64□□□□□ -0.55
NCAPD3-214ENST00000534548 CAPN7Q9Y6W3 813 aa11.64□□□□□ -0.55
NCAPD3-214ENST00000534548 PTPDC1A2A3K4 754 aa11.64□□□□□ -0.55
NCAPD3-214ENST00000534548 BTBD11A6QL63 1104 aa11.64□□□□□ -0.55
NCAPD3-214ENST00000534548 KRT86O43790 486 aa11.64□□□□□ -0.55
NCAPD3-214ENST00000534548 NR1I2O75469 434 aa11.64□□□□□ -0.55
NCAPD3-214ENST00000534548 GTF2E1P29083 439 aaPredicted RBP11.64□□□□□ -0.55
NCAPD3-214ENST00000534548 SSRP1Q08945 709 aaKnown RBP11.64□□□□□ -0.55
NCAPD3-214ENST00000534548 MED14O60244 1454 aa11.64□□□□□ -0.55
NCAPD3-214ENST00000534548 MAP3K19Q56UN5 1328 aa11.64□□□□□ -0.55
NCAPD3-214ENST00000534548 MYO5BQ9ULV0 1848 aa11.64□□□□□ -0.55
NCAPD3-214ENST00000534548 NCOA3Q9Y6Q9 1424 aa11.63□□□□□ -0.55
NCAPD3-214ENST00000534548 CCDC172P0C7W6 258 aa11.63□□□□□ -0.55
NCAPD3-214ENST00000534548 PNMA6AP0CW24 399 aaPredicted RBP11.63□□□□□ -0.55
NCAPD3-214ENST00000534548 ATL3Q6DD88 541 aa11.63□□□□□ -0.55
NCAPD3-214ENST00000534548 CPLX4Q7Z7G2 160 aa11.63□□□□□ -0.55
NCAPD3-214ENST00000534548 ARFGAP2Q8N6H7 521 aa11.63□□□□□ -0.55
NCAPD3-214ENST00000534548 ANKS4BQ8N8V4 417 aa11.63□□□□□ -0.55
NCAPD3-214ENST00000534548 TDRD7Q8NHU6 1098 aaKnown RBP11.63□□□□□ -0.55
NCAPD3-214ENST00000534548 PNMA6EA0A0J9YXQ4 647 aa11.63□□□□□ -0.55
NCAPD3-214ENST00000534548 IARSP41252 1262 aaKnown RBP11.63□□□□□ -0.55
NCAPD3-214ENST00000534548 MTIF2P46199 727 aaKnown RBP11.63□□□□□ -0.55
NCAPD3-214ENST00000534548 AFMP43652 599 aa11.63□□□□□ -0.55
NCAPD3-214ENST00000534548 PPP1R13BQ96KQ4 1090 aa11.63□□□□□ -0.55
NCAPD3-214ENST00000534548 GOLGA8AA7E2F4 631 aa11.63□□□□□ -0.55
NCAPD3-214ENST00000534548 ZNF213O14771 459 aa11.63□□□□□ -0.55
NCAPD3-214ENST00000534548 TRIM21P19474 475 aaKnown RBP11.63□□□□□ -0.55
NCAPD3-214ENST00000534548 CFAP58Q5T655 872 aa11.63□□□□□ -0.55
NCAPD3-214ENST00000534548 FMNL3Q8IVF7 1028 aa11.63□□□□□ -0.55
NCAPD3-214ENST00000534548 MTMR6Q9Y217 621 aa11.63□□□□□ -0.55
NCAPD3-214ENST00000534548 PIK3R4Q99570 1358 aa11.62□□□□□ -0.55
NCAPD3-214ENST00000534548 SGSM2O43147 1006 aa11.62□□□□□ -0.55
NCAPD3-214ENST00000534548 KRT18P05783 430 aaKnown RBP11.62□□□□□ -0.55
NCAPD3-214ENST00000534548 KRT83P78385 493 aa11.62□□□□□ -0.55
NCAPD3-214ENST00000534548 CLEC17AQ6ZS10 378 aa11.62□□□□□ -0.55
NCAPD3-214ENST00000534548 PHAXQ9H814 394 aaKnown RBP11.62□□□□□ -0.55
NCAPD3-214ENST00000534548 CEP126Q9P2H0 1117 aa11.62□□□□□ -0.55
NCAPD3-214ENST00000534548 TTC41PQ6P2S7 1318 aa11.62□□□□□ -0.55
NCAPD3-214ENST00000534548 KLF18A0A0U1RQI7 1052 aa11.62□□□□□ -0.55
NCAPD3-214ENST00000534548 PSDA5PKW4 1024 aaPredicted RBP11.62□□□□□ -0.55
NCAPD3-214ENST00000534548 GOLGA6BA6NDN3 693 aa11.62□□□□□ -0.55
NCAPD3-214ENST00000534548 AKR1B10O60218 316 aa11.62□□□□□ -0.55
NCAPD3-214ENST00000534548 TACC1O75410 805 aa11.62□□□□□ -0.55
NCAPD3-214ENST00000534548 IFIT1P09914 478 aaKnown RBP11.62□□□□□ -0.55
NCAPD3-214ENST00000534548 CDC25BP30305 580 aa11.62□□□□□ -0.55
NCAPD3-214ENST00000534548 KMT5BQ4FZB7 885 aa11.62□□□□□ -0.55
NCAPD3-214ENST00000534548 ZNF530Q6P9A1 599 aaPredicted RBP11.62□□□□□ -0.55
NCAPD3-214ENST00000534548 EXOC4Q96A65 974 aa11.62□□□□□ -0.55
NCAPD3-214ENST00000534548 MAP2P11137 1827 aaKnown RBP11.62□□□□□ -0.55
NCAPD3-214ENST00000534548 VAV2P52735 878 aa11.62□□□□□ -0.55
NCAPD3-214ENST00000534548 HAND2P61296 217 aa11.62□□□□□ -0.55
NCAPD3-214ENST00000534548 CCDC129Q6ZRS4 1044 aa11.62□□□□□ -0.55
NCAPD3-214ENST00000534548 TTC6Q86TZ1 520 aa11.62□□□□□ -0.55
NCAPD3-214ENST00000534548 EFCAB13Q8IY85 973 aa11.62□□□□□ -0.55
NCAPD3-214ENST00000534548 CCDC144CPQ8IYA2 1237 aa11.62□□□□□ -0.55
NCAPD3-214ENST00000534548 ANKRD62A6NC57 917 aa11.62□□□□□ -0.55
NCAPD3-214ENST00000534548 A6NNZ2 444 aa11.62□□□□□ -0.55
NCAPD3-214ENST00000534548 ANXA1P04083 346 aa11.62□□□□□ -0.55
NCAPD3-214ENST00000534548 SPAG1Q07617 926 aa11.62□□□□□ -0.55
NCAPD3-214ENST00000534548 TUBB8Q3ZCM7 444 aa11.62□□□□□ -0.55
NCAPD3-214ENST00000534548 RRAGBQ5VZM2 374 aa11.62□□□□□ -0.55
NCAPD3-214ENST00000534548 CNGA4Q8IV77 575 aa11.62□□□□□ -0.55
NCAPD3-214ENST00000534548 CCDC50Q8IVM0 306 aa11.62□□□□□ -0.55
NCAPD3-214ENST00000534548 RAPGEF4Q8WZA2 1011 aa11.62□□□□□ -0.55
NCAPD3-214ENST00000534548 RAD21O60216 631 aa11.61□□□□□ -0.55
NCAPD3-214ENST00000534548 STX17P56962 302 aa11.61□□□□□ -0.55
NCAPD3-214ENST00000534548 APOBRQ0VD83 1088 aa11.61□□□□□ -0.55
NCAPD3-214ENST00000534548 EYA1Q99502 592 aa11.61□□□□□ -0.55
NCAPD3-214ENST00000534548 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.61□□□□□ -0.55
NCAPD3-214ENST00000534548 SLC12A7Q9Y666 1083 aa11.61□□□□□ -0.55
NCAPD3-214ENST00000534548 ATP7BP35670 1465 aa11.61□□□□□ -0.55
NCAPD3-214ENST00000534548 RGS12O14924 1447 aa11.61□□□□□ -0.55
NCAPD3-214ENST00000534548 NLRP12P59046 1061 aa11.61□□□□□ -0.55
NCAPD3-214ENST00000534548 MEX3CQ5U5Q3 659 aaKnown RBP11.61□□□□□ -0.55
NCAPD3-214ENST00000534548 ANKRD18AQ8IVF6 992 aa11.61□□□□□ -0.55
NCAPD3-214ENST00000534548 IFT81Q8WYA0 676 aa11.61□□□□□ -0.55
NCAPD3-214ENST00000534548 SEPT11Q9NVA2 429 aaKnown RBP11.61□□□□□ -0.55
NCAPD3-214ENST00000534548 CPS1P31327 1500 aa11.61□□□□□ -0.55
NCAPD3-214ENST00000534548 CFAP74Q9C0B2 1584 aa11.61□□□□□ -0.55
NCAPD3-214ENST00000534548 RPS6KB1P23443 525 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms