RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 ITPK1Q13572 414 aa11.56□□□□□ -0.56
CHKA-207ENST00000533728 KRT32Q14532 448 aa11.56□□□□□ -0.56
CHKA-207ENST00000533728 FER1L6Q2WGJ9 1857 aa11.56□□□□□ -0.56
CHKA-207ENST00000533728 USPL1Q5W0Q7 1092 aa11.56□□□□□ -0.56
CHKA-207ENST00000533728 ATG9AQ7Z3C6 839 aa11.56□□□□□ -0.56
CHKA-207ENST00000533728 ZGPATQ8N5A5 531 aaKnown RBP11.56□□□□□ -0.56
CHKA-207ENST00000533728 FSD1Q9BTV5 496 aa11.56□□□□□ -0.56
CHKA-207ENST00000533728 SIL1Q9H173 461 aa11.56□□□□□ -0.56
CHKA-207ENST00000533728 ZDHHC9Q9Y397 364 aa11.56□□□□□ -0.56
CHKA-207ENST00000533728 CYP46A1Q9Y6A2 500 aa11.56□□□□□ -0.56
CHKA-207ENST00000533728 MYH15Q9Y2K3 1946 aa11.56□□□□□ -0.56
CHKA-207ENST00000533728 DLEC1Q9Y238 1755 aa11.56□□□□□ -0.56
CHKA-207ENST00000533728 MAP3K15Q6ZN16 1313 aa11.56□□□□□ -0.56
CHKA-207ENST00000533728 SH3TC1Q8TE82 1336 aa11.56□□□□□ -0.56
CHKA-207ENST00000533728 ERVV-1B6SEH8 477 aa11.55□□□□□ -0.56
CHKA-207ENST00000533728 EPHX2P34913 555 aa11.55□□□□□ -0.56
CHKA-207ENST00000533728 ANKRD1Q15327 319 aa11.55□□□□□ -0.56
CHKA-207ENST00000533728 PKN2Q16513 984 aaKnown RBP11.55□□□□□ -0.56
CHKA-207ENST00000533728 GIGYF2Q6Y7W6 1299 aaKnown RBP11.55□□□□□ -0.56
CHKA-207ENST00000533728 PNMA8AQ86V59 439 aaPredicted RBP11.55□□□□□ -0.56
CHKA-207ENST00000533728 RASEFQ8IZ41 740 aa11.55□□□□□ -0.56
CHKA-207ENST00000533728 LINC00116Q8NCU8 138 aa11.55□□□□□ -0.56
CHKA-207ENST00000533728 OTUD5Q96G74 571 aa11.55□□□□□ -0.56
CHKA-207ENST00000533728 BOLA2Q9H3K6 86 aa11.55□□□□□ -0.56
CHKA-207ENST00000533728 LMBRD1Q9NUN5 540 aa11.55□□□□□ -0.56
CHKA-207ENST00000533728 HACL1Q9UJ83 578 aa11.55□□□□□ -0.56
CHKA-207ENST00000533728 RBM8AQ9Y5S9 174 aaKnown RBP11.55□□□□□ -0.56
CHKA-207ENST00000533728 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.55□□□□□ -0.56
CHKA-207ENST00000533728 DDX60Q8IY21 1712 aaKnown RBP11.55□□□□□ -0.56
CHKA-207ENST00000533728 DOCK2Q92608 1830 aa11.54□□□□□ -0.56
CHKA-207ENST00000533728 MBD3O95983 291 aa11.54□□□□□ -0.56
CHKA-207ENST00000533728 CSF1RP07333 972 aa11.54□□□□□ -0.56
CHKA-207ENST00000533728 ATP6V1AP38606 617 aa11.54□□□□□ -0.56
CHKA-207ENST00000533728 PIP4K2AP48426 406 aaPredicted RBP11.54□□□□□ -0.56
CHKA-207ENST00000533728 PTH1RQ03431 593 aa11.54□□□□□ -0.56
CHKA-207ENST00000533728 FMR1Q06787 632 aaKnown RBP eCLIP11.54□□□□□ -0.56
CHKA-207ENST00000533728 LRRFIP1Q32MZ4 808 aaKnown RBP11.54□□□□□ -0.56
CHKA-207ENST00000533728 CREB3L3Q68CJ9 461 aa11.54□□□□□ -0.56
CHKA-207ENST00000533728 RUFY3Q7L099 469 aa11.54□□□□□ -0.56
CHKA-207ENST00000533728 KBTBD3Q8NAB2 608 aa11.54□□□□□ -0.56
CHKA-207ENST00000533728 ZBTB38Q8NAP3 1195 aaPredicted RBP11.54□□□□□ -0.56
CHKA-207ENST00000533728 KLHDC4Q8TBB5 520 aa11.54□□□□□ -0.56
CHKA-207ENST00000533728 TLR7Q9NYK1 1049 aaKnown RBP11.54□□□□□ -0.56
CHKA-207ENST00000533728 AKAP2Q9Y2D5 859 aa11.54□□□□□ -0.56
CHKA-207ENST00000533728 CENPFP49454 3210 aa11.54□□□□□ -0.56
CHKA-207ENST00000533728 CYP19A1P11511 503 aaPredicted RBP11.53□□□□□ -0.56
CHKA-207ENST00000533728 GYS1P13807 737 aa11.53□□□□□ -0.56
CHKA-207ENST00000533728 IL6STP40189 918 aaPredicted RBP11.53□□□□□ -0.56
CHKA-207ENST00000533728 ZNF445P59923 1031 aa11.53□□□□□ -0.56
CHKA-207ENST00000533728 CST9Q5W186 159 aa11.53□□□□□ -0.56
CHKA-207ENST00000533728 DNAJC10Q8IXB1 793 aa11.53□□□□□ -0.56
CHKA-207ENST00000533728 UPF3BQ9BZI7 483 aaKnown RBP11.53□□□□□ -0.56
CHKA-207ENST00000533728 HELLSQ9NRZ9 838 aa11.53□□□□□ -0.56
CHKA-207ENST00000533728 PDRG1Q9NUG6 133 aa11.53□□□□□ -0.56
CHKA-207ENST00000533728 SAGE1Q9NXZ1 904 aa11.53□□□□□ -0.56
CHKA-207ENST00000533728 RAPGEFL1Q9UHV5 662 aa11.53□□□□□ -0.56
CHKA-207ENST00000533728 U3KPZ7 1027 aaPredicted RBP11.53□□□□□ -0.56
CHKA-207ENST00000533728 SCN7AQ01118 1682 aa11.52□□□□□ -0.56
CHKA-207ENST00000533728 A0A0D9SFI3 127 aa11.52□□□□□ -0.57
CHKA-207ENST00000533728 SLC27A2O14975 620 aa11.52□□□□□ -0.57
CHKA-207ENST00000533728 TAF5LO75529 589 aa11.52□□□□□ -0.57
CHKA-207ENST00000533728 CASTP20810 708 aaKnown RBP11.52□□□□□ -0.57
CHKA-207ENST00000533728 AK2P54819 239 aa11.52□□□□□ -0.57
CHKA-207ENST00000533728 MCMDC2Q4G0Z9 681 aa11.52□□□□□ -0.57
CHKA-207ENST00000533728 TRAPPC3LQ5T215 181 aa11.52□□□□□ -0.57
CHKA-207ENST00000533728 PRPF40BQ6NWY9 871 aaKnown RBP11.52□□□□□ -0.57
CHKA-207ENST00000533728 TMEM87AQ8NBN3 555 aa11.52□□□□□ -0.57
CHKA-207ENST00000533728 FAM227BQ96M60 508 aa11.52□□□□□ -0.57
CHKA-207ENST00000533728 JAKMIP1Q96N16 626 aaKnown RBP11.52□□□□□ -0.57
CHKA-207ENST00000533728 DBNDD2Q9BQY9 259 aa11.52□□□□□ -0.57
CHKA-207ENST00000533728 ZBTB3Q9H5J0 574 aa11.52□□□□□ -0.57
CHKA-207ENST00000533728 ATP6V1DQ9Y5K8 247 aa11.52□□□□□ -0.57
CHKA-207ENST00000533728 DDX49Q9Y6V7 483 aaKnown RBP11.52□□□□□ -0.57
CHKA-207ENST00000533728 A0A1B0GUL6 1792 aa11.51□□□□□ -0.57
CHKA-207ENST00000533728 RGL2O15211 777 aa11.51□□□□□ -0.57
CHKA-207ENST00000533728 RPS6KA4O75676 772 aa11.51□□□□□ -0.57
CHKA-207ENST00000533728 KCNJ4P48050 445 aa11.51□□□□□ -0.57
CHKA-207ENST00000533728 NOGQ13253 232 aa11.51□□□□□ -0.57
CHKA-207ENST00000533728 CCDC57Q2TAC2 916 aa11.51□□□□□ -0.57
CHKA-207ENST00000533728 MCTP1Q6DN14 999 aa11.51□□□□□ -0.57
CHKA-207ENST00000533728 CHRDL2Q6WN34 429 aa11.51□□□□□ -0.57
CHKA-207ENST00000533728 SAPCD2Q86UD0 394 aa11.51□□□□□ -0.57
CHKA-207ENST00000533728 TTLL6Q8N841 843 aa11.51□□□□□ -0.57
CHKA-207ENST00000533728 ZNF512BQ96KM6 892 aaPredicted RBP11.51□□□□□ -0.57
CHKA-207ENST00000533728 DSCC1Q9BVC3 393 aa11.51□□□□□ -0.57
CHKA-207ENST00000533728 CEP126Q9P2H0 1117 aa11.51□□□□□ -0.57
CHKA-207ENST00000533728 NRXN2Q9P2S2 1712 aa11.51□□□□□ -0.57
CHKA-207ENST00000533728 RBBP6Q7Z6E9 1792 aaKnown RBP11.5□□□□□ -0.57
CHKA-207ENST00000533728 PAPPA2Q9BXP8 1791 aa11.5□□□□□ -0.57
CHKA-207ENST00000533728 ZFYP08048 801 aaPredicted RBP11.5□□□□□ -0.57
CHKA-207ENST00000533728 HMGB1P09429 215 aaKnown RBP11.5□□□□□ -0.57
CHKA-207ENST00000533728 XRCC6P12956 609 aaKnown RBP eCLIP11.5□□□□□ -0.57
CHKA-207ENST00000533728 PKP1Q13835 747 aa11.5□□□□□ -0.57
CHKA-207ENST00000533728 INTS5Q6P9B9 1019 aaKnown RBP11.5□□□□□ -0.57
CHKA-207ENST00000533728 BLOC1S2Q6QNY1 142 aa11.5□□□□□ -0.57
CHKA-207ENST00000533728 CHMP4CQ96CF2 233 aa11.5□□□□□ -0.57
CHKA-207ENST00000533728 HHIPL1Q96JK4 782 aa11.5□□□□□ -0.57
CHKA-207ENST00000533728 ZIC5Q96T25 663 aa11.5□□□□□ -0.57
CHKA-207ENST00000533728 GRPEL1Q9HAV7 217 aa11.5□□□□□ -0.57
CHKA-207ENST00000533728 SMC3Q9UQE7 1217 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms