RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 AOX1Q06278 1338 aa21.5■■□□□ 1.03
CTSB-222ENST00000531551 FER1L6Q2WGJ9 1857 aa21.5■■□□□ 1.03
CTSB-222ENST00000531551 PODNQ7Z5L7 613 aa21.5■■□□□ 1.03
CTSB-222ENST00000531551 DCAF8L1A6NGE4 600 aa21.49■■□□□ 1.03
CTSB-222ENST00000531551 TRIM6-TRIM34B2RNG4 842 aa21.49■■□□□ 1.03
CTSB-222ENST00000531551 LMNB1P20700 586 aa21.49■■□□□ 1.03
CTSB-222ENST00000531551 ZAP70P43403 619 aa21.49■■□□□ 1.03
CTSB-222ENST00000531551 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.49■■□□□ 1.03
CTSB-222ENST00000531551 SEMA3EO15041 775 aa21.49■■□□□ 1.03
CTSB-222ENST00000531551 GTF2IP78347 998 aa21.49■■□□□ 1.03
CTSB-222ENST00000531551 TTC22Q5TAA0 569 aa21.49■■□□□ 1.03
CTSB-222ENST00000531551 EDC3Q96F86 508 aaKnown RBP21.49■■□□□ 1.03
CTSB-222ENST00000531551 HAUS7Q99871 368 aa21.49■■□□□ 1.03
CTSB-222ENST00000531551 KCNQ5Q9NR82 932 aa21.49■■□□□ 1.03
CTSB-222ENST00000531551 GOLIM4O00461 696 aa21.48■■□□□ 1.03
CTSB-222ENST00000531551 RILPL2Q969X0 211 aa21.47■■□□□ 1.03
CTSB-222ENST00000531551 RNF181Q9P0P0 153 aa21.47■■□□□ 1.03
CTSB-222ENST00000531551 ZNRF3Q9ULT6 936 aa21.47■■□□□ 1.03
CTSB-222ENST00000531551 YDJCA8MPS7 323 aa21.47■■□□□ 1.03
CTSB-222ENST00000531551 GSPT1P15170 499 aaKnown RBP21.47■■□□□ 1.03
CTSB-222ENST00000531551 TTLL5Q6EMB2 1281 aa21.47■■□□□ 1.03
CTSB-222ENST00000531551 ANTXR1Q9H6X2 564 aa21.47■■□□□ 1.03
CTSB-222ENST00000531551 PAG1Q9NWQ8 432 aa21.47■■□□□ 1.03
CTSB-222ENST00000531551 RAD17O75943 681 aa21.46■■□□□ 1.03
CTSB-222ENST00000531551 TBC1D9Q6ZT07 1266 aa21.46■■□□□ 1.03
CTSB-222ENST00000531551 ABCF2Q9UG63 623 aa21.46■■□□□ 1.03
CTSB-222ENST00000531551 COL4A5P29400 1685 aa21.46■■□□□ 1.03
CTSB-222ENST00000531551 COL1A1P02452 1464 aaPredicted RBP21.45■■□□□ 1.03
CTSB-222ENST00000531551 CYP2E1P05181 493 aaPredicted RBP21.45■■□□□ 1.02
CTSB-222ENST00000531551 C9orf131Q5VYM1 1079 aa21.45■■□□□ 1.02
CTSB-222ENST00000531551 USP17L3A6NCW0 530 aa21.44■■□□□ 1.02
CTSB-222ENST00000531551 USP17L4A6NCW7 530 aa21.44■■□□□ 1.02
CTSB-222ENST00000531551 USP17L1Q7RTZ2 530 aa21.44■■□□□ 1.02
CTSB-222ENST00000531551 CNTROBQ8N137 903 aa21.44■■□□□ 1.02
CTSB-222ENST00000531551 WDR66Q8TBY9 1149 aa21.44■■□□□ 1.02
CTSB-222ENST00000531551 MXD3Q9BW11 206 aa21.43■■□□□ 1.02
CTSB-222ENST00000531551 SDSP20132 328 aa21.43■■□□□ 1.02
CTSB-222ENST00000531551 EIF6P56537 245 aaKnown RBP21.43■■□□□ 1.02
CTSB-222ENST00000531551 MFSD14BQ5SR56 506 aa21.43■■□□□ 1.02
CTSB-222ENST00000531551 PIH1D3Q9NQM4 214 aaKnown RBP21.43■■□□□ 1.02
CTSB-222ENST00000531551 LRP2BPQ9P2M1 347 aa21.43■■□□□ 1.02
CTSB-222ENST00000531551 TTF1Q15361 905 aaPredicted RBP21.42■■□□□ 1.02
CTSB-222ENST00000531551 STRIP1Q5VSL9 837 aa21.42■■□□□ 1.02
CTSB-222ENST00000531551 EVI5LQ96CN4 794 aa21.42■■□□□ 1.02
CTSB-222ENST00000531551 FSD1Q9BTV5 496 aa21.42■■□□□ 1.02
CTSB-222ENST00000531551 FAM205AQ6ZU69 1335 aa21.42■■□□□ 1.02
CTSB-222ENST00000531551 IDH1O75874 414 aaKnown RBP21.41■■□□□ 1.02
CTSB-222ENST00000531551 CXCL9Q07325 125 aa21.41■■□□□ 1.02
CTSB-222ENST00000531551 BMP2KLQ5H9B9 411 aa21.41■■□□□ 1.02
CTSB-222ENST00000531551 PDS5AQ29RF7 1337 aaKnown RBP21.41■■□□□ 1.02
CTSB-222ENST00000531551 PSMD14O00487 310 aa21.41■■□□□ 1.02
CTSB-222ENST00000531551 CIAPIN1Q6FI81 312 aa21.41■■□□□ 1.02
CTSB-222ENST00000531551 ZGPATQ8N5A5 531 aaKnown RBP21.41■■□□□ 1.02
CTSB-222ENST00000531551 TBC1D22AQ8WUA7 517 aa21.41■■□□□ 1.02
CTSB-222ENST00000531551 RAI14Q9P0K7 980 aa21.41■■□□□ 1.02
CTSB-222ENST00000531551 F8W031 263 aaPredicted RBP21.4■■□□□ 1.02
CTSB-222ENST00000531551 FZD9O00144 591 aa21.4■■□□□ 1.02
CTSB-222ENST00000531551 DACT2Q5SW24 774 aa21.4■■□□□ 1.02
CTSB-222ENST00000531551 GJA3Q9Y6H8 435 aa21.4■■□□□ 1.02
CTSB-222ENST00000531551 ZBTB22O15209 634 aa21.39■■□□□ 1.02
CTSB-222ENST00000531551 PRDX5P30044 214 aa21.39■■□□□ 1.02
CTSB-222ENST00000531551 ERICH6Q7L0X2 663 aa21.39■■□□□ 1.02
CTSB-222ENST00000531551 KBTBD3Q8NAB2 608 aa21.39■■□□□ 1.02
CTSB-222ENST00000531551 LDHBP07195 334 aaKnown RBP21.39■■□□□ 1.01
CTSB-222ENST00000531551 TNIP1Q15025 636 aa21.39■■□□□ 1.01
CTSB-222ENST00000531551 ZBTB12Q9Y330 459 aaPredicted RBP21.39■■□□□ 1.01
CTSB-222ENST00000531551 MAP3K12Q12852 859 aa21.38■■□□□ 1.01
CTSB-222ENST00000531551 GRIK5Q16478 980 aa21.38■■□□□ 1.01
CTSB-222ENST00000531551 SPTY2D1Q68D10 685 aaPredicted RBP21.38■■□□□ 1.01
CTSB-222ENST00000531551 CERS5Q8N5B7 392 aa21.38■■□□□ 1.01
CTSB-222ENST00000531551 ZNF541Q9H0D2 1346 aa21.38■■□□□ 1.01
CTSB-222ENST00000531551 SALL1Q9NSC2 1324 aa21.38■■□□□ 1.01
CTSB-222ENST00000531551 RSBN1LQ6PCB5 846 aaPredicted RBP21.37■■□□□ 1.01
CTSB-222ENST00000531551 VIL1P09327 827 aaKnown RBP21.37■■□□□ 1.01
CTSB-222ENST00000531551 DZIP1Q86YF9 867 aaKnown RBP21.37■■□□□ 1.01
CTSB-222ENST00000531551 KIAA0825Q8IV33 1275 aa21.37■■□□□ 1.01
CTSB-222ENST00000531551 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.37■■□□□ 1.012e-6■■□□□ 11.9
CTSB-222ENST00000531551 AKAP11Q9UKA4 1901 aa21.36■■□□□ 1.01
CTSB-222ENST00000531551 SLC9C2Q5TAH2 1124 aa21.36■■□□□ 1.01
CTSB-222ENST00000531551 CHD4Q14839 1912 aa21.36■■□□□ 1.01
CTSB-222ENST00000531551 CHGBP05060 677 aa21.35■■□□□ 1.01
CTSB-222ENST00000531551 MAGEB6Q8N7X4 407 aa21.35■■□□□ 1.01
CTSB-222ENST00000531551 TTF2Q9UNY4 1162 aaKnown RBP21.35■■□□□ 1.01
CTSB-222ENST00000531551 SCN9AQ15858 1988 aa21.35■■□□□ 1.01
CTSB-222ENST00000531551 MECOMQ03112 1051 aa21.35■■□□□ 1.01
CTSB-222ENST00000531551 SLFNL1Q499Z3 407 aa21.35■■□□□ 1.01
CTSB-222ENST00000531551 CCDC88AQ3V6T2 1871 aa21.34■■□□□ 1.01
CTSB-222ENST00000531551 MYH13Q9UKX3 1938 aa21.34■■□□□ 1.01
CTSB-222ENST00000531551 FKBP1AP62942 108 aaKnown RBP21.34■■□□□ 1.01
CTSB-222ENST00000531551 LRRFIP1Q32MZ4 808 aaKnown RBP21.34■■□□□ 1.01
CTSB-222ENST00000531551 ZSCAN25Q6NSZ9 544 aa21.34■■□□□ 1.01
CTSB-222ENST00000531551 MYO3BQ8WXR4 1341 aa21.34■■□□□ 1.01
CTSB-222ENST00000531551 NAA16Q6N069 864 aaPredicted RBP21.33■■□□□ 1.01
CTSB-222ENST00000531551 NSUN4Q96CB9 384 aaKnown RBP21.33■■□□□ 1.01
CTSB-222ENST00000531551 SBF1O95248 1867 aa21.33■■□□□ 1
CTSB-222ENST00000531551 PDE6AP16499 860 aa21.32■■□□□ 1
CTSB-222ENST00000531551 SCNN1DP51172 638 aa21.32■■□□□ 1
CTSB-222ENST00000531551 DIAPH3Q9NSV4 1193 aa21.32■■□□□ 1
CTSB-222ENST00000531551 SUGT1Q9Y2Z0 365 aa21.32■■□□□ 1
CTSB-222ENST00000531551 ZNF532Q9HCE3 1301 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms