RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 IGF2BP3O00425 579 aaKnown RBP eCLIP26.93■■□□□ 1.9
CHKA-206ENST00000531341 MTMR14Q8NCE2 650 aa26.93■■□□□ 1.9
CHKA-206ENST00000531341 JAG2Q9Y219 1238 aa26.93■■□□□ 1.9
CHKA-206ENST00000531341 CLRN2A0PK11 232 aa26.92■■□□□ 1.9
CHKA-206ENST00000531341 WWC1Q8IX03 1113 aa26.92■■□□□ 1.9
CHKA-206ENST00000531341 WNK4Q96J92 1243 aa26.92■■□□□ 1.9
CHKA-206ENST00000531341 PRMT6Q96LA8 375 aaPredicted RBP26.92■■□□□ 1.9
CHKA-206ENST00000531341 MANSC4A6NHS7 340 aaPredicted RBP26.91■■□□□ 1.9
CHKA-206ENST00000531341 FOXO4P98177 505 aa26.91■■□□□ 1.9
CHKA-206ENST00000531341 CFAP100Q494V2 611 aa26.91■■□□□ 1.9
CHKA-206ENST00000531341 NBPF12Q5TAG4 269 aaPredicted RBP26.91■■□□□ 1.9
CHKA-206ENST00000531341 DNAAF4Q8WXU2 420 aa26.91■■□□□ 1.9
CHKA-206ENST00000531341 TRIM17Q9Y577 477 aa26.91■■□□□ 1.9
CHKA-206ENST00000531341 COL1A1P02452 1464 aaPredicted RBP26.9■■□□□ 1.9
CHKA-206ENST00000531341 ANKRD18BA2A2Z9 1011 aa26.9■■□□□ 1.9
CHKA-206ENST00000531341 ALDH1A1P00352 501 aa26.9■■□□□ 1.9
CHKA-206ENST00000531341 GJA5P36382 358 aa26.9■■□□□ 1.9
CHKA-206ENST00000531341 FKBP5Q13451 457 aaPredicted RBP26.9■■□□□ 1.9
CHKA-206ENST00000531341 C15orf52Q6ZUT6 534 aaKnown RBP26.9■■□□□ 1.9
CHKA-206ENST00000531341 OTOP1Q7RTM1 612 aa26.9■■□□□ 1.9
CHKA-206ENST00000531341 LINS1Q8NG48 757 aa26.9■■□□□ 1.9
CHKA-206ENST00000531341 POTEFA5A3E0 1075 aa26.89■■□□□ 1.9
CHKA-206ENST00000531341 IL1R1P14778 569 aa26.89■■□□□ 1.9
CHKA-206ENST00000531341 INHBEP58166 350 aa26.89■■□□□ 1.9
CHKA-206ENST00000531341 CCDC27Q2M243 656 aa26.89■■□□□ 1.9
CHKA-206ENST00000531341 MYH16Q9H6N6 1097 aa26.89■■□□□ 1.9
CHKA-206ENST00000531341 SPDYE2BA6NHP3 402 aa26.88■■□□□ 1.89
CHKA-206ENST00000531341 USP2O75604 605 aaPredicted RBP26.88■■□□□ 1.89
CHKA-206ENST00000531341 SPDYE6P0CI01 402 aa26.88■■□□□ 1.89
CHKA-206ENST00000531341 ZBTB48P10074 688 aaPredicted RBP26.88■■□□□ 1.89
CHKA-206ENST00000531341 PPP1R12BO60237 982 aaPredicted RBP26.87■■□□□ 1.89
CHKA-206ENST00000531341 CAP1Q01518 475 aa26.87■■□□□ 1.89
CHKA-206ENST00000531341 VEZTQ9HBM0 779 aa26.87■■□□□ 1.89
CHKA-206ENST00000531341 EPHA10Q5JZY3 1008 aa26.86■■□□□ 1.89
CHKA-206ENST00000531341 ZNF594Q96JF6 807 aaPredicted RBP26.86■■□□□ 1.89
CHKA-206ENST00000531341 PTPN18Q99952 460 aa26.86■■□□□ 1.89
CHKA-206ENST00000531341 PPP2R3BQ9Y5P8 575 aa26.86■■□□□ 1.89
CHKA-206ENST00000531341 IFIT5Q13325 482 aaKnown RBP26.85■■□□□ 1.89
CHKA-206ENST00000531341 CD99L2Q8TCZ2 262 aa26.85■■□□□ 1.89
CHKA-206ENST00000531341 F6X3S4 739 aa26.84■■□□□ 1.89
CHKA-206ENST00000531341 CRHR2Q13324 411 aa26.84■■□□□ 1.89
CHKA-206ENST00000531341 RASA3Q14644 834 aa26.84■■□□□ 1.89
CHKA-206ENST00000531341 SUPT20HL1Q3ZLR7 823 aa26.84■■□□□ 1.89
CHKA-206ENST00000531341 CHMP3Q9Y3E7 222 aa26.84■■□□□ 1.89
CHKA-206ENST00000531341 PLIN1O60240 522 aa26.83■■□□□ 1.89
CHKA-206ENST00000531341 VAMP4O75379 141 aa26.83■■□□□ 1.89
CHKA-206ENST00000531341 FKBP1AP62942 108 aaKnown RBP26.83■■□□□ 1.89
CHKA-206ENST00000531341 ZNF804AQ7Z570 1209 aa26.83■■□□□ 1.89
CHKA-206ENST00000531341 PTPN22Q9Y2R2 807 aa26.83■■□□□ 1.89
CHKA-206ENST00000531341 A0A1B0GUL6 1792 aa26.82■■□□□ 1.88
CHKA-206ENST00000531341 MYO1BO43795 1136 aa26.82■■□□□ 1.88
CHKA-206ENST00000531341 RBM5P52756 815 aaKnown RBP eCLIP26.82■■□□□ 1.88
CHKA-206ENST00000531341 BEND3Q5T5X7 828 aa26.82■■□□□ 1.88
CHKA-206ENST00000531341 LMBR1LQ6UX01 489 aa26.82■■□□□ 1.88
CHKA-206ENST00000531341 CDAN1Q8IWY9 1227 aa26.82■■□□□ 1.88
CHKA-206ENST00000531341 FANCIQ9NVI1 1328 aa26.82■■□□□ 1.88
CHKA-206ENST00000531341 UNCXA6NJT0 531 aa26.81■■□□□ 1.88
CHKA-206ENST00000531341 IL16Q14005 1332 aa26.81■■□□□ 1.88
CHKA-206ENST00000531341 TESPA1A2RU30 521 aaPredicted RBP26.8■■□□□ 1.88
CHKA-206ENST00000531341 IREB2P48200 963 aaKnown RBP26.8■■□□□ 1.88
CHKA-206ENST00000531341 ELP3Q9H9T3 547 aa26.8■■□□□ 1.88
CHKA-206ENST00000531341 ECM29Q5VYK3 1845 aa26.8■■□□□ 1.88
CHKA-206ENST00000531341 INTS3Q68E01 1043 aaKnown RBP26.79■■□□□ 1.88
CHKA-206ENST00000531341 ANKRD13AQ8IZ07 590 aa26.79■■□□□ 1.88
CHKA-206ENST00000531341 CNKSR2Q8WXI2 1034 aa26.79■■□□□ 1.88
CHKA-206ENST00000531341 ERO1AQ96HE7 468 aa26.79■■□□□ 1.88
CHKA-206ENST00000531341 TDRD3Q9H7E2 651 aaKnown RBP26.79■■□□□ 1.88
CHKA-206ENST00000531341 LAMB1P07942 1786 aa26.79■■□□□ 1.88
CHKA-206ENST00000531341 EXOSC9Q06265 439 aaKnown RBP26.78■■□□□ 1.88
CHKA-206ENST00000531341 LDHAL6AQ6ZMR3 332 aa26.78■■□□□ 1.88
CHKA-206ENST00000531341 OPTNQ96CV9 577 aa26.78■■□□□ 1.88
CHKA-206ENST00000531341 ZNF70Q9UC06 446 aaPredicted RBP26.78■■□□□ 1.88
CHKA-206ENST00000531341 FAM205AQ6ZU69 1335 aa26.77■■□□□ 1.88
CHKA-206ENST00000531341 EN2P19622 333 aaPredicted RBP26.77■■□□□ 1.88
CHKA-206ENST00000531341 MS4A4AQ96JQ5 239 aa26.77■■□□□ 1.88
CHKA-206ENST00000531341 TEPSINQ96N21 525 aa26.77■■□□□ 1.88
CHKA-206ENST00000531341 EFCC1Q9HA90 598 aa26.77■■□□□ 1.88
CHKA-206ENST00000531341 SALL2Q9Y467 1007 aaPredicted RBP26.77■■□□□ 1.88
CHKA-206ENST00000531341 GYG1P46976 350 aa26.76■■□□□ 1.87
CHKA-206ENST00000531341 SP3Q02447 781 aa26.76■■□□□ 1.87
CHKA-206ENST00000531341 CCDC57Q2TAC2 916 aa26.76■■□□□ 1.87
CHKA-206ENST00000531341 SPDYE2Q495Y8 402 aa26.76■■□□□ 1.87
CHKA-206ENST00000531341 TDRD7Q8NHU6 1098 aaKnown RBP26.76■■□□□ 1.87
CHKA-206ENST00000531341 CNNM1Q9NRU3 951 aa26.76■■□□□ 1.87
CHKA-206ENST00000531341 GRIK5Q16478 980 aa26.75■■□□□ 1.87
CHKA-206ENST00000531341 OTUD7BQ6GQQ9 843 aa26.75■■□□□ 1.87
CHKA-206ENST00000531341 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.75■■□□□ 1.87
CHKA-206ENST00000531341 ARMC5Q96C12 935 aa26.75■■□□□ 1.87
CHKA-206ENST00000531341 PUS3Q9BZE2 481 aaKnown RBP26.75■■□□□ 1.87
CHKA-206ENST00000531341 TTF2Q9UNY4 1162 aaKnown RBP26.75■■□□□ 1.87
CHKA-206ENST00000531341 TAF7LQ5H9L4 462 aa26.74■■□□□ 1.87
CHKA-206ENST00000531341 HABP4Q5JVS0 413 aaKnown RBP26.74■■□□□ 1.87
CHKA-206ENST00000531341 MFSD14BQ5SR56 506 aa26.74■■□□□ 1.87
CHKA-206ENST00000531341 TCP10L2B9ZVM9 353 aa26.73■■□□□ 1.87
CHKA-206ENST00000531341 DZIP1LQ8IYY4 767 aaKnown RBP26.73■■□□□ 1.87
CHKA-206ENST00000531341 BRI3BPQ8WY22 251 aa26.73■■□□□ 1.87
CHKA-206ENST00000531341 GCC1Q96CN9 775 aa26.73■■□□□ 1.87
CHKA-206ENST00000531341 FAM84BQ96KN1 310 aaPredicted RBP26.73■■□□□ 1.87
CHKA-206ENST00000531341 TMEM39BQ9GZU3 492 aa26.73■■□□□ 1.87
CHKA-206ENST00000531341 SPINK5Q9NQ38 1064 aaPredicted RBP26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms