RNA–Protein interactions for RNA: ENST00000528216.5

PGAP2-231, Transcript of post-GPI attachment to proteins 2, human

TSL 1 (best)

Gene PGAP2, Length 1,815 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PGAP2-231	ENST00000528216	LARP6	Q9BRS8	491 aa	Known RBP	12.04	□□□□□ -0.48
PGAP2-231	ENST00000528216	CFAP45	Q9UL16	551 aa		12.04	□□□□□ -0.48
PGAP2-231	ENST00000528216	SBF2	Q86WG5	1849 aa		12.04	□□□□□ -0.48
PGAP2-231	ENST00000528216	LOC102724428	A0A0B4J2F2	783 aa		12.04	□□□□□ -0.48
PGAP2-231	ENST00000528216	GADD45B	O75293	160 aa	Predicted RBP	12.04	□□□□□ -0.48
PGAP2-231	ENST00000528216	SIK1	P57059	783 aa		12.04	□□□□□ -0.48
PGAP2-231	ENST00000528216	DNM1	Q05193	864 aa	Known RBP	12.04	□□□□□ -0.48
PGAP2-231	ENST00000528216	CCDC152	Q4G0S7	254 aa		12.04	□□□□□ -0.48
PGAP2-231	ENST00000528216	INTS5	Q6P9B9	1019 aa	Known RBP	12.04	□□□□□ -0.48
PGAP2-231	ENST00000528216	PROM2	Q8N271	834 aa		12.04	□□□□□ -0.48
PGAP2-231	ENST00000528216	OSBP2	Q969R2	916 aa		12.04	□□□□□ -0.48
PGAP2-231	ENST00000528216	COL5A3	P25940	1745 aa	Predicted RBP	12.04	□□□□□ -0.48
PGAP2-231	ENST00000528216	CARMIL3	Q8ND23	1372 aa		12.04	□□□□□ -0.48
PGAP2-231	ENST00000528216	NHS	Q6T4R5	1651 aa		12.03	□□□□□ -0.48
PGAP2-231	ENST00000528216	BCOR	Q6W2J9	1755 aa		12.03	□□□□□ -0.48
PGAP2-231	ENST00000528216	FGFR2	P21802	821 aa		12.03	□□□□□ -0.48
PGAP2-231	ENST00000528216	ADORA1	P30542	326 aa		12.03	□□□□□ -0.48
PGAP2-231	ENST00000528216	ADD2	P35612	726 aa		12.03	□□□□□ -0.48
PGAP2-231	ENST00000528216	ZAP70	P43403	619 aa		12.03	□□□□□ -0.48
PGAP2-231	ENST00000528216	CRKL	P46109	303 aa	Known RBP	12.03	□□□□□ -0.48
PGAP2-231	ENST00000528216	ALX1	Q15699	326 aa		12.03	□□□□□ -0.48
PGAP2-231	ENST00000528216	WASHC4	Q2M389	1173 aa		12.03	□□□□□ -0.48
PGAP2-231	ENST00000528216	STOX1	Q6ZVD7	989 aa		12.03	□□□□□ -0.48
PGAP2-231	ENST00000528216	BRF1	Q92994	677 aa		12.03	□□□□□ -0.48
PGAP2-231	ENST00000528216	CCNL1	Q9UK58	526 aa	Predicted RBP	12.03	□□□□□ -0.48
PGAP2-231	ENST00000528216	NSFL1C	Q9UNZ2	370 aa	Known RBP	12.03	□□□□□ -0.48
PGAP2-231	ENST00000528216	TAF6L	Q9Y6J9	622 aa		12.03	□□□□□ -0.48
PGAP2-231	ENST00000528216	NDUFB9	Q9Y6M9	179 aa		12.03	□□□□□ -0.48
PGAP2-231	ENST00000528216		H3BQV1	296 aa		12.02	□□□□□ -0.48
PGAP2-231	ENST00000528216		M0R2C6	588 aa		12.02	□□□□□ -0.48
PGAP2-231	ENST00000528216	FIBP	O43427	364 aa		12.02	□□□□□ -0.48
PGAP2-231	ENST00000528216	ATP6V1A	P38606	617 aa		12.02	□□□□□ -0.48
PGAP2-231	ENST00000528216	IFFO2	Q5TF58	517 aa		12.02	□□□□□ -0.48
PGAP2-231	ENST00000528216	NCOA7	Q8NI08	942 aa		12.02	□□□□□ -0.48
PGAP2-231	ENST00000528216	CDC5L	Q99459	802 aa	Known RBP	12.02	□□□□□ -0.48
PGAP2-231	ENST00000528216	DDX19A	Q9NUU7	478 aa	Known RBP	12.02	□□□□□ -0.48
PGAP2-231	ENST00000528216	DDX60	Q8IY21	1712 aa	Known RBP	12.02	□□□□□ -0.49
PGAP2-231	ENST00000528216	UBN2	Q6ZU65	1347 aa		12.02	□□□□□ -0.49
PGAP2-231	ENST00000528216	DOCK2	Q92608	1830 aa		12.02	□□□□□ -0.49
PGAP2-231	ENST00000528216	CAMTA2	O94983	1202 aa		12.02	□□□□□ -0.49
PGAP2-231	ENST00000528216	CDC37L1	Q7L3B6	337 aa		12.02	□□□□□ -0.49
PGAP2-231	ENST00000528216	RALYL	Q86SE5	291 aa	Known RBP	12.02	□□□□□ -0.49
PGAP2-231	ENST00000528216	ZSCAN30	Q86W11	494 aa		12.02	□□□□□ -0.49
PGAP2-231	ENST00000528216	MPHOSPH8	Q99549	860 aa		12.02	□□□□□ -0.49
PGAP2-231	ENST00000528216	GDPD2	Q9HCC8	539 aa		12.02	□□□□□ -0.49
PGAP2-231	ENST00000528216	GOLGA6L4	A6NEF3	574 aa		12.01	□□□□□ -0.49
PGAP2-231	ENST00000528216	ZNF213	O14771	459 aa		12.01	□□□□□ -0.49
PGAP2-231	ENST00000528216	GPAA1	O43292	621 aa		12.01	□□□□□ -0.49
PGAP2-231	ENST00000528216	IGHMBP2	P38935	993 aa	Known RBP	12.01	□□□□□ -0.49
PGAP2-231	ENST00000528216	MCAM	P43121	646 aa		12.01	□□□□□ -0.49
PGAP2-231	ENST00000528216	SCRN1	Q12765	414 aa		12.01	□□□□□ -0.49
PGAP2-231	ENST00000528216	TRDN	Q13061	729 aa		12.01	□□□□□ -0.49
PGAP2-231	ENST00000528216	REST	Q13127	1097 aa		12.01	□□□□□ -0.49
PGAP2-231	ENST00000528216	TMED8	Q6PL24	325 aa	Predicted RBP	12.01	□□□□□ -0.49
PGAP2-231	ENST00000528216	NSUN7	Q8NE18	718 aa	Known RBP	12.01	□□□□□ -0.49
PGAP2-231	ENST00000528216	CHAMP1	Q96JM3	812 aa		12.01	□□□□□ -0.49
PGAP2-231	ENST00000528216	SPATA32	Q96LK8	384 aa		12.01	□□□□□ -0.49
PGAP2-231	ENST00000528216	ZNF396	Q96N95	335 aa	Predicted RBP	12.01	□□□□□ -0.49
PGAP2-231	ENST00000528216	MTA3	Q9BTC8	594 aa		12.01	□□□□□ -0.49
PGAP2-231	ENST00000528216	LRRC4B	Q9NT99	713 aa		12.01	□□□□□ -0.49
PGAP2-231	ENST00000528216	CCDC39	Q9UFE4	941 aa		12.01	□□□□□ -0.49
PGAP2-231	ENST00000528216	BTAF1	O14981	1849 aa		12.01	□□□□□ -0.49
PGAP2-231	ENST00000528216	TNS1	Q9HBL0	1735 aa	Known RBP	12.01	□□□□□ -0.49
PGAP2-231	ENST00000528216	MYH15	Q9Y2K3	1946 aa		12	□□□□□ -0.49
PGAP2-231	ENST00000528216	CAVIN2	O95810	425 aa		12	□□□□□ -0.49
PGAP2-231	ENST00000528216	FGA	P02671	866 aa		12	□□□□□ -0.49
PGAP2-231	ENST00000528216	GNAT2	P19087	354 aa		12	□□□□□ -0.49
PGAP2-231	ENST00000528216	MAP3K12	Q12852	859 aa		12	□□□□□ -0.49
PGAP2-231	ENST00000528216	SLC27A3	Q5K4L6	730 aa		12	□□□□□ -0.49
PGAP2-231	ENST00000528216	CCDC102B	Q68D86	513 aa		12	□□□□□ -0.49
PGAP2-231	ENST00000528216	TCEANC2	Q96MN5	208 aa		12	□□□□□ -0.49
PGAP2-231	ENST00000528216	SALL1	Q9NSC2	1324 aa		12	□□□□□ -0.49
PGAP2-231	ENST00000528216	ZBTB22	O15209	634 aa		12	□□□□□ -0.49
PGAP2-231	ENST00000528216	IGSF3	O75054	1194 aa		12	□□□□□ -0.49
PGAP2-231	ENST00000528216	PDIA3	P30101	505 aa	Known RBP	12	□□□□□ -0.49
PGAP2-231	ENST00000528216	STK3	Q13188	491 aa		12	□□□□□ -0.49
PGAP2-231	ENST00000528216	SUSD4	Q5VX71	490 aa		12	□□□□□ -0.49
PGAP2-231	ENST00000528216	MB21D2	Q8IYB1	491 aa	Predicted RBP	12	□□□□□ -0.49
PGAP2-231	ENST00000528216	LEO1	Q8WVC0	666 aa	Predicted RBP	12	□□□□□ -0.49
PGAP2-231	ENST00000528216	RRAGD	Q9NQL2	400 aa	Predicted RBP	12	□□□□□ -0.49
PGAP2-231	ENST00000528216	CNTNAP4	Q9C0A0	1308 aa		11.99	□□□□□ -0.49
PGAP2-231	ENST00000528216	PTPDC1	A2A3K4	754 aa		11.99	□□□□□ -0.49
PGAP2-231	ENST00000528216	NTSR2	O95665	410 aa		11.99	□□□□□ -0.49
PGAP2-231	ENST00000528216	CCDC192	P0DO97	292 aa		11.99	□□□□□ -0.49
PGAP2-231	ENST00000528216	SCARF1	Q14162	830 aa		11.99	□□□□□ -0.49
PGAP2-231	ENST00000528216	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	11.99	□□□□□ -0.49
PGAP2-231	ENST00000528216	SLC9C2	Q5TAH2	1124 aa		11.99	□□□□□ -0.49
PGAP2-231	ENST00000528216	FOXD4L3	Q6VB84	417 aa	Predicted RBP	11.99	□□□□□ -0.49
PGAP2-231	ENST00000528216	TTC6	Q86TZ1	520 aa		11.99	□□□□□ -0.49
PGAP2-231	ENST00000528216	TMEM87B	Q96K49	555 aa		11.99	□□□□□ -0.49
PGAP2-231	ENST00000528216	RTN4	Q9NQC3	1192 aa	Known RBP	11.99	□□□□□ -0.49
PGAP2-231	ENST00000528216	CDKL5	O76039	1030 aa		11.98	□□□□□ -0.49
PGAP2-231	ENST00000528216	CHGB	P05060	677 aa		11.98	□□□□□ -0.49
PGAP2-231	ENST00000528216	PDE6A	P16499	860 aa		11.98	□□□□□ -0.49
PGAP2-231	ENST00000528216	APOBR	Q0VD83	1088 aa		11.98	□□□□□ -0.49
PGAP2-231	ENST00000528216	RC3H1	Q5TC82	1133 aa	Known RBP	11.98	□□□□□ -0.49
PGAP2-231	ENST00000528216	SYNE4	Q8N205	404 aa		11.98	□□□□□ -0.49
PGAP2-231	ENST00000528216	SPATA5	Q8NB90	893 aa		11.98	□□□□□ -0.49
PGAP2-231	ENST00000528216	CCDC85A	Q96PX6	553 aa	Predicted RBP	11.98	□□□□□ -0.49
PGAP2-231	ENST00000528216	CNNM2	Q9H8M5	875 aa		11.98	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms