RNA–Protein interactions for RNA: ENST00000528062.7

RBM39-243, Transcript of RNA binding motif protein 39, humanhuman

TSL 1 (best) BASIC

Gene RBM39, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-243ENST00000528062 ECHDC1Q9NTX5 307 aa15.46■□□□□ 0.07
RBM39-243ENST00000528062 ST5P78524 1137 aa15.45■□□□□ 0.06
RBM39-243ENST00000528062 CLASRPQ8N2M8 674 aaKnown RBP15.45■□□□□ 0.06
RBM39-243ENST00000528062 C17orf53Q8N3J3 647 aaPredicted RBP15.45■□□□□ 0.06
RBM39-243ENST00000528062 PODXL2Q9NZ53 605 aa15.45■□□□□ 0.06
RBM39-243ENST00000528062 AP5Z1O43299 807 aa15.45■□□□□ 0.06
RBM39-243ENST00000528062 RFX5P48382 616 aaPredicted RBP15.45■□□□□ 0.06
RBM39-243ENST00000528062 NECTIN1Q15223 517 aa15.45■□□□□ 0.06
RBM39-243ENST00000528062 SF3B3Q15393 1217 aaKnown RBP15.45■□□□□ 0.06
RBM39-243ENST00000528062 ME3Q16798 604 aa15.45■□□□□ 0.06
RBM39-243ENST00000528062 NECAB1Q8N987 351 aa15.45■□□□□ 0.06
RBM39-243ENST00000528062 BRIP1Q9BX63 1249 aa15.45■□□□□ 0.06
RBM39-243ENST00000528062 DYNC1I1O14576 645 aa15.44■□□□□ 0.06
RBM39-243ENST00000528062 NPHP1O15259 732 aa15.44■□□□□ 0.06
RBM39-243ENST00000528062 LETM1O95202 739 aaPredicted RBP15.44■□□□□ 0.06
RBM39-243ENST00000528062 SLC51AQ86UW1 340 aa15.44■□□□□ 0.06
RBM39-243ENST00000528062 KLHDC4Q8TBB5 520 aa15.44■□□□□ 0.06
RBM39-243ENST00000528062 RUFY2Q8WXA3 655 aa15.44■□□□□ 0.06
RBM39-243ENST00000528062 PIBF1Q8WXW3 757 aa15.44■□□□□ 0.06
RBM39-243ENST00000528062 TM6SF1Q9BZW5 370 aa15.44■□□□□ 0.06
RBM39-243ENST00000528062 SEC31BQ9NQW1 1179 aa15.44■□□□□ 0.06
RBM39-243ENST00000528062 KDM4AO75164 1064 aa15.43■□□□□ 0.06
RBM39-243ENST00000528062 POLD1P28340 1107 aa15.43■□□□□ 0.06
RBM39-243ENST00000528062 FAM227BQ96M60 508 aa15.43■□□□□ 0.06
RBM39-243ENST00000528062 SPON1Q9HCB6 807 aa15.43■□□□□ 0.06
RBM39-243ENST00000528062 TPCN1Q9ULQ1 816 aa15.43■□□□□ 0.06
RBM39-243ENST00000528062 ATP6V1DQ9Y5K8 247 aa15.43■□□□□ 0.06
RBM39-243ENST00000528062 CYP46A1Q9Y6A2 500 aa15.43■□□□□ 0.06
RBM39-243ENST00000528062 CCDC171Q6TFL3 1326 aa15.43■□□□□ 0.06
RBM39-243ENST00000528062 RTL9Q8NET4 1388 aa15.43■□□□□ 0.06
RBM39-243ENST00000528062 AACSQ86V21 672 aa15.43■□□□□ 0.06
RBM39-243ENST00000528062 NLRP3Q96P20 1036 aa15.43■□□□□ 0.06
RBM39-243ENST00000528062 VPS37CA5D8V6 355 aaPredicted RBP15.42■□□□□ 0.06
RBM39-243ENST00000528062 IFIT2P09913 472 aaKnown RBP15.42■□□□□ 0.06
RBM39-243ENST00000528062 SH2B1Q9NRF2 756 aaPredicted RBP15.42■□□□□ 0.06
RBM39-243ENST00000528062 RBM8AQ9Y5S9 174 aaKnown RBP15.42■□□□□ 0.06
RBM39-243ENST00000528062 SLX4Q8IY92 1834 aa15.42■□□□□ 0.06
RBM39-243ENST00000528062 NOLC1Q14978 699 aaKnown RBP eCLIP15.42■□□□□ 0.06
RBM39-243ENST00000528062 CREB3L3Q68CJ9 461 aa15.42■□□□□ 0.06
RBM39-243ENST00000528062 EVI5LQ96CN4 794 aa15.42■□□□□ 0.06
RBM39-243ENST00000528062 ZSCAN31Q96LW9 406 aaPredicted RBP15.42■□□□□ 0.06
RBM39-243ENST00000528062 SASH1O94885 1247 aa15.41■□□□□ 0.06
RBM39-243ENST00000528062 SRGNP10124 158 aa15.41■□□□□ 0.06
RBM39-243ENST00000528062 ITGA6P23229 1130 aa15.41■□□□□ 0.06
RBM39-243ENST00000528062 CHRNA5P30532 468 aa15.41■□□□□ 0.06
RBM39-243ENST00000528062 PTPN12Q05209 780 aaKnown RBP15.41■□□□□ 0.06
RBM39-243ENST00000528062 EAF2Q96CJ1 260 aaPredicted RBP15.41■□□□□ 0.06
RBM39-243ENST00000528062 ZNF594Q96JF6 807 aaPredicted RBP15.41■□□□□ 0.06
RBM39-243ENST00000528062 TLR7Q9NYK1 1049 aaKnown RBP15.41■□□□□ 0.06
RBM39-243ENST00000528062 TAF6LQ9Y6J9 622 aa15.41■□□□□ 0.06
RBM39-243ENST00000528062 LRRC37AA6NMS7 1700 aa15.41■□□□□ 0.06
RBM39-243ENST00000528062 PLCB2Q00722 1185 aa15.41■□□□□ 0.06
RBM39-243ENST00000528062 NMIQ13287 307 aaPredicted RBP15.41■□□□□ 0.06
RBM39-243ENST00000528062 CHMP3Q9Y3E7 222 aa15.41■□□□□ 0.06
RBM39-243ENST00000528062 KCNA3P22001 575 aa15.4■□□□□ 0.06
RBM39-243ENST00000528062 CCDC152Q4G0S7 254 aa15.4■□□□□ 0.06
RBM39-243ENST00000528062 FAM173BQ6P4H8 233 aa15.4■□□□□ 0.06
RBM39-243ENST00000528062 CELF1Q92879 486 aaKnown RBP15.4■□□□□ 0.06
RBM39-243ENST00000528062 MAP4K1Q92918 833 aa15.4■□□□□ 0.06
RBM39-243ENST00000528062 MAP7D2Q96T17 732 aa15.4■□□□□ 0.06
RBM39-243ENST00000528062 CDC37L1Q7L3B6 337 aa15.39■□□□□ 0.05
RBM39-243ENST00000528062 TTC6Q86TZ1 520 aa15.39■□□□□ 0.05
RBM39-243ENST00000528062 MYRIPQ8NFW9 859 aa15.39■□□□□ 0.05
RBM39-243ENST00000528062 GPATCH3Q96I76 525 aa15.39■□□□□ 0.05
RBM39-243ENST00000528062 TCEANC2Q96MN5 208 aa15.39■□□□□ 0.05
RBM39-243ENST00000528062 CCDC8Q9H0W5 538 aaPredicted RBP15.39■□□□□ 0.05
RBM39-243ENST00000528062 HDAC5Q9UQL6 1122 aa15.39■□□□□ 0.05
RBM39-243ENST00000528062 A0A0D9SFI3 127 aa15.39■□□□□ 0.05
RBM39-243ENST00000528062 SLC27A2O14975 620 aa15.39■□□□□ 0.05
RBM39-243ENST00000528062 HOXA10P31260 410 aaPredicted RBP15.39■□□□□ 0.05
RBM39-243ENST00000528062 PDE6BP35913 854 aa15.39■□□□□ 0.05
RBM39-243ENST00000528062 DNTTIP2Q5QJE6 756 aaKnown RBP15.39■□□□□ 0.05
RBM39-243ENST00000528062 FERMT3Q86UX7 667 aa15.39■□□□□ 0.05
RBM39-243ENST00000528062 ERC1Q8IUD2 1116 aa15.39■□□□□ 0.05
RBM39-243ENST00000528062 TSC1Q92574 1164 aa15.39■□□□□ 0.05
RBM39-243ENST00000528062 LTBP1Q14766 1721 aa15.39■□□□□ 0.05
RBM39-243ENST00000528062 HSP90B1P14625 803 aaKnown RBP15.38■□□□□ 0.05
RBM39-243ENST00000528062 ZKSCAN1P17029 563 aaPredicted RBP15.38■□□□□ 0.05
RBM39-243ENST00000528062 KCNF1Q9H3M0 494 aa15.38■□□□□ 0.05
RBM39-243ENST00000528062 SPTLC3Q9NUV7 552 aa15.38■□□□□ 0.05
RBM39-243ENST00000528062 IFIT5Q13325 482 aaKnown RBP15.38■□□□□ 0.05
RBM39-243ENST00000528062 C2CD5Q86YS7 1000 aa15.38■□□□□ 0.05
RBM39-243ENST00000528062 ARID3AQ99856 593 aa15.38■□□□□ 0.05
RBM39-243ENST00000528062 PUS3Q9BZE2 481 aaKnown RBP15.38■□□□□ 0.05
RBM39-243ENST00000528062 LARP1BQ659C4 914 aaKnown RBP15.37■□□□□ 0.05
RBM39-243ENST00000528062 NLGN2Q8NFZ4 835 aa15.37■□□□□ 0.05
RBM39-243ENST00000528062 COPRSQ9NQ92 184 aa15.37■□□□□ 0.05
RBM39-243ENST00000528062 SNRKQ9NRH2 765 aa15.37■□□□□ 0.05
RBM39-243ENST00000528062 A0A0G2JLW4 131 aa15.37■□□□□ 0.05
RBM39-243ENST00000528062 DPEP1P16444 411 aa15.37■□□□□ 0.05
RBM39-243ENST00000528062 LIG1P18858 919 aa15.37■□□□□ 0.05
RBM39-243ENST00000528062 KCNJ4P48050 445 aa15.37■□□□□ 0.05
RBM39-243ENST00000528062 CCDC57Q2TAC2 916 aa15.37■□□□□ 0.05
RBM39-243ENST00000528062 ANKRD18BA2A2Z9 1011 aa15.36■□□□□ 0.05
RBM39-243ENST00000528062 LRRC24Q50LG9 513 aa15.36■□□□□ 0.05
RBM39-243ENST00000528062 ATG9AQ7Z3C6 839 aa15.36■□□□□ 0.05
RBM39-243ENST00000528062 RPGRQ92834 1020 aaKnown RBP15.36■□□□□ 0.05
RBM39-243ENST00000528062 BOLA2Q9H3K6 86 aa15.36■□□□□ 0.05
RBM39-243ENST00000528062 PYCARDQ9ULZ3 195 aa15.36■□□□□ 0.05
RBM39-243ENST00000528062 NPR1P16066 1061 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms