RNA–Protein interactions for RNA: ENST00000527133.2

CLNS1A-207, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-207ENST00000527133 PPP2R3BQ9Y5P8 575 aa16.69■□□□□ 0.26
CLNS1A-207ENST00000527133 F8W031 263 aaPredicted RBP16.68■□□□□ 0.26
CLNS1A-207ENST00000527133 H7C1W4 665 aa16.68■□□□□ 0.26
CLNS1A-207ENST00000527133 EN2P19622 333 aaPredicted RBP16.68■□□□□ 0.26
CLNS1A-207ENST00000527133 CHRNDQ07001 517 aa16.68■□□□□ 0.26
CLNS1A-207ENST00000527133 SUPT20HL1Q3ZLR7 823 aa16.68■□□□□ 0.26
CLNS1A-207ENST00000527133 SNAP23O00161 211 aa16.67■□□□□ 0.26
CLNS1A-207ENST00000527133 MYO1BO43795 1136 aa16.67■□□□□ 0.26
CLNS1A-207ENST00000527133 GJA5P36382 358 aa16.67■□□□□ 0.26
CLNS1A-207ENST00000527133 CFAP100Q494V2 611 aa16.67■□□□□ 0.26
CLNS1A-207ENST00000527133 NBPF12Q5TAG4 269 aaPredicted RBP16.67■□□□□ 0.26
CLNS1A-207ENST00000527133 OTUD7BQ6GQQ9 843 aa16.67■□□□□ 0.26
CLNS1A-207ENST00000527133 MTMR14Q8NCE2 650 aa16.67■□□□□ 0.26
CLNS1A-207ENST00000527133 ARMC5Q96C12 935 aa16.67■□□□□ 0.26
CLNS1A-207ENST00000527133 STK31Q9BXU1 1019 aa16.67■□□□□ 0.26
CLNS1A-207ENST00000527133 EFCC1Q9HA90 598 aa16.67■□□□□ 0.26
CLNS1A-207ENST00000527133 VEZTQ9HBM0 779 aa16.67■□□□□ 0.26
CLNS1A-207ENST00000527133 IREB2P48200 963 aaKnown RBP16.66■□□□□ 0.26
CLNS1A-207ENST00000527133 G2E3Q7L622 706 aa16.66■□□□□ 0.26
CLNS1A-207ENST00000527133 PLA2G12BQ9BX93 195 aa16.66■□□□□ 0.26
CLNS1A-207ENST00000527133 RBBP6Q7Z6E9 1792 aaKnown RBP16.66■□□□□ 0.26
CLNS1A-207ENST00000527133 AOX1Q06278 1338 aa16.66■□□□□ 0.26
CLNS1A-207ENST00000527133 LAMB1P07942 1786 aa16.65■□□□□ 0.26
CLNS1A-207ENST00000527133 SPDYE2BA6NHP3 402 aa16.65■□□□□ 0.26
CLNS1A-207ENST00000527133 UNCXA6NJT0 531 aa16.65■□□□□ 0.26
CLNS1A-207ENST00000527133 TAF5LO75529 589 aa16.65■□□□□ 0.26
CLNS1A-207ENST00000527133 SPDYE6P0CI01 402 aa16.65■□□□□ 0.26
CLNS1A-207ENST00000527133 CAP1Q01518 475 aa16.65■□□□□ 0.26
CLNS1A-207ENST00000527133 SP3Q02447 781 aa16.65■□□□□ 0.26
CLNS1A-207ENST00000527133 GCKRQ14397 625 aa16.65■□□□□ 0.26
CLNS1A-207ENST00000527133 HELBQ8NG08 1087 aaPredicted RBP16.65■□□□□ 0.26
CLNS1A-207ENST00000527133 PRMT6Q96LA8 375 aaPredicted RBP16.65■□□□□ 0.26
CLNS1A-207ENST00000527133 PTPN18Q99952 460 aa16.65■□□□□ 0.26
CLNS1A-207ENST00000527133 JAG2Q9Y219 1238 aa16.65■□□□□ 0.26
CLNS1A-207ENST00000527133 ECM29Q5VYK3 1845 aa16.65■□□□□ 0.26
CLNS1A-207ENST00000527133 IRS2Q9Y4H2 1338 aa16.65■□□□□ 0.26
CLNS1A-207ENST00000527133 USP2O75604 605 aaPredicted RBP16.64■□□□□ 0.25
CLNS1A-207ENST00000527133 CSF1RP07333 972 aa16.64■□□□□ 0.25
CLNS1A-207ENST00000527133 RASA3Q14644 834 aa16.64■□□□□ 0.25
CLNS1A-207ENST00000527133 ANKRD13AQ8IZ07 590 aa16.64■□□□□ 0.25
CLNS1A-207ENST00000527133 TSR2Q969E8 191 aaKnown RBP16.64■□□□□ 0.25
CLNS1A-207ENST00000527133 ANKRD18BA2A2Z9 1011 aa16.63■□□□□ 0.25
CLNS1A-207ENST00000527133 FXR1P51114 621 aaKnown RBP eCLIP16.63■□□□□ 0.25
CLNS1A-207ENST00000527133 RBM5P52756 815 aaKnown RBP eCLIP16.63■□□□□ 0.25
CLNS1A-207ENST00000527133 CASP7P55210 303 aa16.63■□□□□ 0.25
CLNS1A-207ENST00000527133 ZNF804AQ7Z570 1209 aa16.63■□□□□ 0.25
CLNS1A-207ENST00000527133 TMEM106CQ9BVX2 250 aa16.63■□□□□ 0.25
CLNS1A-207ENST00000527133 ELP3Q9H9T3 547 aa16.63■□□□□ 0.25
CLNS1A-207ENST00000527133 TESPA1A2RU30 521 aaPredicted RBP16.62■□□□□ 0.25
CLNS1A-207ENST00000527133 SLC4A2P04920 1241 aa16.62■□□□□ 0.25
CLNS1A-207ENST00000527133 IL1R1P14778 569 aa16.62■□□□□ 0.25
CLNS1A-207ENST00000527133 C15orf52Q6ZUT6 534 aaKnown RBP16.62■□□□□ 0.25
CLNS1A-207ENST00000527133 OPTNQ96CV9 577 aa16.62■□□□□ 0.25
CLNS1A-207ENST00000527133 MYH16Q9H6N6 1097 aa16.62■□□□□ 0.25
CLNS1A-207ENST00000527133 SZT2Q5T011 3432 aa16.61■□□□□ 0.25
CLNS1A-207ENST00000527133 FKBP1AP62942 108 aaKnown RBP16.61■□□□□ 0.25
CLNS1A-207ENST00000527133 ZNF333Q96JL9 665 aa16.61■□□□□ 0.25
CLNS1A-207ENST00000527133 TWISTNBQ3B726 338 aaPredicted RBP16.6■□□□□ 0.25
CLNS1A-207ENST00000527133 SLC9C1Q4G0N8 1177 aa16.6■□□□□ 0.25
CLNS1A-207ENST00000527133 CNKSR2Q8WXI2 1034 aa16.6■□□□□ 0.25
CLNS1A-207ENST00000527133 MS4A4AQ96JQ5 239 aa16.6■□□□□ 0.25
CLNS1A-207ENST00000527133 COLQQ9Y215 455 aaPredicted RBP16.6■□□□□ 0.25
CLNS1A-207ENST00000527133 CHMP3Q9Y3E7 222 aa16.6■□□□□ 0.25
CLNS1A-207ENST00000527133 PTCH2Q9Y6C5 1203 aa16.6■□□□□ 0.25
CLNS1A-207ENST00000527133 CEP290O15078 2479 aa16.6■□□□□ 0.25
CLNS1A-207ENST00000527133 OTOFQ9HC10 1997 aa16.6■□□□□ 0.25
CLNS1A-207ENST00000527133 MYCP01106 439 aaPredicted RBP16.59■□□□□ 0.25
CLNS1A-207ENST00000527133 FLIIQ13045 1269 aa16.59■□□□□ 0.25
CLNS1A-207ENST00000527133 IFIT5Q13325 482 aaKnown RBP16.59■□□□□ 0.25
CLNS1A-207ENST00000527133 FKBP5Q13451 457 aaPredicted RBP16.59■□□□□ 0.25
CLNS1A-207ENST00000527133 TAF1CQ15572 869 aaPredicted RBP16.59■□□□□ 0.25
CLNS1A-207ENST00000527133 LINS1Q8NG48 757 aa16.59■□□□□ 0.25
CLNS1A-207ENST00000527133 DNAAF4Q8WXU2 420 aa16.59■□□□□ 0.25
CLNS1A-207ENST00000527133 BRI3BPQ8WY22 251 aa16.59■□□□□ 0.25
CLNS1A-207ENST00000527133 A0A1B0GUL6 1792 aa16.59■□□□□ 0.25
CLNS1A-207ENST00000527133 CCL15-CCL14A0A0B4J2E2 113 aa16.58■□□□□ 0.24
CLNS1A-207ENST00000527133 PLIN1O60240 522 aa16.58■□□□□ 0.24
CLNS1A-207ENST00000527133 TNFAIP1Q13829 316 aa16.58■□□□□ 0.24
CLNS1A-207ENST00000527133 ARHGEF6Q15052 776 aa16.58■□□□□ 0.24
CLNS1A-207ENST00000527133 CCL15Q16663 113 aa16.58■□□□□ 0.24
CLNS1A-207ENST00000527133 SLC4A8Q2Y0W8 1093 aa16.58■□□□□ 0.24
CLNS1A-207ENST00000527133 SPDYE2Q495Y8 402 aa16.58■□□□□ 0.24
CLNS1A-207ENST00000527133 NBPF11Q86T75 865 aa16.58■□□□□ 0.24
CLNS1A-207ENST00000527133 CDAN1Q8IWY9 1227 aa16.58■□□□□ 0.24
CLNS1A-207ENST00000527133 ZFYVE28Q9HCC9 887 aa16.58■□□□□ 0.24
CLNS1A-207ENST00000527133 ZNF70Q9UC06 446 aaPredicted RBP16.58■□□□□ 0.24
CLNS1A-207ENST00000527133 RANBP2P49792 3224 aaKnown RBP16.58■□□□□ 0.24
CLNS1A-207ENST00000527133 FOXO4P98177 505 aa16.57■□□□□ 0.24
CLNS1A-207ENST00000527133 VGLL4Q14135 290 aa16.57■□□□□ 0.24
CLNS1A-207ENST00000527133 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.57■□□□□ 0.24
CLNS1A-207ENST00000527133 TDRD3Q9H7E2 651 aaKnown RBP16.57■□□□□ 0.24
CLNS1A-207ENST00000527133 PRKRIP1Q9H875 184 aaPredicted RBP16.57■□□□□ 0.24
CLNS1A-207ENST00000527133 TRIOBPQ9H2D6 2365 aa16.56■□□□□ 0.24
CLNS1A-207ENST00000527133 GTF2A2P52657 109 aa16.56■□□□□ 0.24
CLNS1A-207ENST00000527133 MFSD14BQ5SR56 506 aa16.56■□□□□ 0.24
CLNS1A-207ENST00000527133 OTUD5Q96G74 571 aa16.56■□□□□ 0.24
CLNS1A-207ENST00000527133 TEPSINQ96N21 525 aa16.56■□□□□ 0.24
CLNS1A-207ENST00000527133 TTF2Q9UNY4 1162 aaKnown RBP16.56■□□□□ 0.24
CLNS1A-207ENST00000527133 FAM205AQ6ZU69 1335 aa16.55■□□□□ 0.24
CLNS1A-207ENST00000527133 TCP10L2B9ZVM9 353 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms