RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 PDCP20941 246 aa11.5□□□□□ -0.57
USP35-201ENST00000526425 ITGA6P23229 1130 aa11.5□□□□□ -0.57
USP35-201ENST00000526425 TCIRG1Q13488 830 aa11.5□□□□□ -0.57
USP35-201ENST00000526425 HLFQ16534 295 aa11.5□□□□□ -0.57
USP35-201ENST00000526425 SH2B1Q9NRF2 756 aaPredicted RBP11.5□□□□□ -0.57
USP35-201ENST00000526425 U3KPZ7 1027 aaPredicted RBP11.5□□□□□ -0.57
USP35-201ENST00000526425 SPATA31A5Q5VU36 1347 aa11.5□□□□□ -0.57
USP35-201ENST00000526425 SPATA31A7Q8IWB4 1347 aa11.5□□□□□ -0.57
USP35-201ENST00000526425 SALL3Q9BXA9 1300 aa11.5□□□□□ -0.57
USP35-201ENST00000526425 BRD1O95696 1058 aa11.5□□□□□ -0.57
USP35-201ENST00000526425 F13A1P00488 732 aa11.5□□□□□ -0.57
USP35-201ENST00000526425 SLFN14P0C7P3 912 aa11.5□□□□□ -0.57
USP35-201ENST00000526425 COPRSQ9NQ92 184 aa11.5□□□□□ -0.57
USP35-201ENST00000526425 ROBO1Q9Y6N7 1651 aa11.5□□□□□ -0.57
USP35-201ENST00000526425 RXRAP19793 462 aa11.5□□□□□ -0.57
USP35-201ENST00000526425 SEMA3FQ13275 785 aa11.5□□□□□ -0.57
USP35-201ENST00000526425 KRT32Q14532 448 aa11.5□□□□□ -0.57
USP35-201ENST00000526425 XAGE2Q96GT9 111 aa11.5□□□□□ -0.57
USP35-201ENST00000526425 CEP83Q9Y592 693 aa11.5□□□□□ -0.57
USP35-201ENST00000526425 LMO7Q8WWI1 1683 aa11.49□□□□□ -0.57
USP35-201ENST00000526425 ZAP70P43403 619 aa11.49□□□□□ -0.57
USP35-201ENST00000526425 MTX1Q13505 466 aa11.49□□□□□ -0.57
USP35-201ENST00000526425 TERF2Q15554 542 aa11.49□□□□□ -0.57
USP35-201ENST00000526425 MARCH10Q8NA82 808 aaPredicted RBP11.49□□□□□ -0.57
USP35-201ENST00000526425 NEK11Q8NG66 645 aa11.49□□□□□ -0.57
USP35-201ENST00000526425 CCDC87Q9NVE4 849 aa11.49□□□□□ -0.57
USP35-201ENST00000526425 AKAP2Q9Y2D5 859 aa11.49□□□□□ -0.57
USP35-201ENST00000526425 ATP5JP18859 108 aa11.49□□□□□ -0.57
USP35-201ENST00000526425 RAD51AP2Q09MP3 1159 aa11.49□□□□□ -0.57
USP35-201ENST00000526425 PPP2R5AQ15172 486 aa11.49□□□□□ -0.57
USP35-201ENST00000526425 SLC9C2Q5TAH2 1124 aa11.49□□□□□ -0.57
USP35-201ENST00000526425 GOLGA6L1Q8N7Z2 621 aa11.49□□□□□ -0.57
USP35-201ENST00000526425 GTF3C6Q969F1 213 aa11.49□□□□□ -0.57
USP35-201ENST00000526425 INTS4Q96HW7 963 aaKnown RBP11.49□□□□□ -0.57
USP35-201ENST00000526425 USP25Q9UHP3 1055 aa11.49□□□□□ -0.57
USP35-201ENST00000526425 JAG2Q9Y219 1238 aa11.49□□□□□ -0.57
USP35-201ENST00000526425 ZNF652Q9Y2D9 606 aa11.49□□□□□ -0.57
USP35-201ENST00000526425 DHX16O60231 1041 aaKnown RBP11.49□□□□□ -0.57
USP35-201ENST00000526425 CALR3Q96L12 384 aaKnown RBP11.49□□□□□ -0.57
USP35-201ENST00000526425 GREM2Q9H772 168 aa11.49□□□□□ -0.57
USP35-201ENST00000526425 GABPB1Q06547 395 aaPredicted RBP11.48□□□□□ -0.57
USP35-201ENST00000526425 CDC37L1Q7L3B6 337 aa11.48□□□□□ -0.57
USP35-201ENST00000526425 LRP2BPQ9P2M1 347 aa11.48□□□□□ -0.57
USP35-201ENST00000526425 NIP7Q9Y221 180 aaKnown RBP eCLIP11.48□□□□□ -0.57
USP35-201ENST00000526425 HSPA1LP34931 641 aa11.48□□□□□ -0.57
USP35-201ENST00000526425 IMMTQ16891 758 aaKnown RBP11.48□□□□□ -0.57
USP35-201ENST00000526425 KRT222Q8N1A0 295 aa11.48□□□□□ -0.57
USP35-201ENST00000526425 KBTBD3Q8NAB2 608 aa11.48□□□□□ -0.57
USP35-201ENST00000526425 RNF217Q8TC41 542 aa11.48□□□□□ -0.57
USP35-201ENST00000526425 AIDAQ96BJ3 306 aa11.48□□□□□ -0.57
USP35-201ENST00000526425 KCNQ2O43526 872 aa11.48□□□□□ -0.57
USP35-201ENST00000526425 RPS6KB1P23443 525 aa11.48□□□□□ -0.57
USP35-201ENST00000526425 BIRC2Q13490 618 aa11.48□□□□□ -0.57
USP35-201ENST00000526425 COL9A3Q14050 684 aaPredicted RBP11.48□□□□□ -0.57
USP35-201ENST00000526425 OTUD7BQ6GQQ9 843 aa11.48□□□□□ -0.57
USP35-201ENST00000526425 PIBF1Q8WXW3 757 aa11.48□□□□□ -0.57
USP35-201ENST00000526425 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.48□□□□□ -0.57
USP35-201ENST00000526425 MAP3K15Q6ZN16 1313 aa11.48□□□□□ -0.57
USP35-201ENST00000526425 ME1P48163 572 aa11.47□□□□□ -0.57
USP35-201ENST00000526425 MMP14P50281 582 aa11.47□□□□□ -0.57
USP35-201ENST00000526425 FEZ1Q99689 392 aa11.47□□□□□ -0.57
USP35-201ENST00000526425 NOL10Q9BSC4 688 aaKnown RBP11.47□□□□□ -0.57
USP35-201ENST00000526425 POLR3DP05423 398 aaPredicted RBP11.47□□□□□ -0.57
USP35-201ENST00000526425 VPS72Q15906 364 aa11.47□□□□□ -0.57
USP35-201ENST00000526425 BARGINQ6ZT62 677 aa11.47□□□□□ -0.57
USP35-201ENST00000526425 MAP4K1Q92918 833 aa11.47□□□□□ -0.57
USP35-201ENST00000526425 RAI14Q9P0K7 980 aa11.47□□□□□ -0.57
USP35-201ENST00000526425 MINDY4BA8MYZ0 360 aa11.47□□□□□ -0.57
USP35-201ENST00000526425 CCDC172P0C7W6 258 aa11.47□□□□□ -0.57
USP35-201ENST00000526425 ARID4AP29374 1257 aaPredicted RBP11.47□□□□□ -0.57
USP35-201ENST00000526425 DDIT3P35638 169 aa11.47□□□□□ -0.57
USP35-201ENST00000526425 IL6STP40189 918 aaPredicted RBP11.47□□□□□ -0.57
USP35-201ENST00000526425 CRKLP46109 303 aaKnown RBP11.47□□□□□ -0.57
USP35-201ENST00000526425 GIGYF2Q6Y7W6 1299 aaKnown RBP11.47□□□□□ -0.57
USP35-201ENST00000526425 LRRC37A3O60309 1634 aa11.46□□□□□ -0.57
USP35-201ENST00000526425 GOLGA8BA8MQT2 603 aa11.46□□□□□ -0.57
USP35-201ENST00000526425 ZNF213O14771 459 aa11.46□□□□□ -0.57
USP35-201ENST00000526425 IRF6O14896 467 aa11.46□□□□□ -0.57
USP35-201ENST00000526425 RNF113AO15541 343 aaKnown RBP11.46□□□□□ -0.57
USP35-201ENST00000526425 CYP19A1P11511 503 aaPredicted RBP11.46□□□□□ -0.57
USP35-201ENST00000526425 ICE2Q659A1 982 aa11.46□□□□□ -0.57
USP35-201ENST00000526425 TNMDQ9H2S6 317 aa11.46□□□□□ -0.57
USP35-201ENST00000526425 EFCC1Q9HA90 598 aa11.46□□□□□ -0.57
USP35-201ENST00000526425 SPATA31A6Q5VVP1 1343 aa11.46□□□□□ -0.57
USP35-201ENST00000526425 XIRP1Q702N8 1843 aaKnown RBP11.46□□□□□ -0.57
USP35-201ENST00000526425 CYP21A2P08686 494 aa11.46□□□□□ -0.57
USP35-201ENST00000526425 IGHMBP2P38935 993 aaKnown RBP11.46□□□□□ -0.57
USP35-201ENST00000526425 CUL4AQ13619 759 aa11.46□□□□□ -0.57
USP35-201ENST00000526425 EGFL6Q8IUX8 553 aa11.46□□□□□ -0.57
USP35-201ENST00000526425 MIGA1Q8NAN2 632 aa11.46□□□□□ -0.57
USP35-201ENST00000526425 NUP133Q8WUM0 1156 aa11.46□□□□□ -0.57
USP35-201ENST00000526425 C16orf45Q96MC5 204 aaPredicted RBP11.46□□□□□ -0.57
USP35-201ENST00000526425 ZSWIM6Q9HCJ5 1215 aa11.46□□□□□ -0.57
USP35-201ENST00000526425 GPHNQ9NQX3 736 aaPredicted RBP11.46□□□□□ -0.57
USP35-201ENST00000526425 PALLDQ8WX93 1383 aa11.46□□□□□ -0.57
USP35-201ENST00000526425 A0A0G2JLW4 131 aa11.46□□□□□ -0.58
USP35-201ENST00000526425 NECTIN1Q15223 517 aa11.46□□□□□ -0.58
USP35-201ENST00000526425 LRSAM1Q6UWE0 723 aa11.46□□□□□ -0.58
USP35-201ENST00000526425 KRBA2Q6ZNG9 492 aa11.46□□□□□ -0.58
USP35-201ENST00000526425 MICU3Q86XE3 530 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms