RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 CCDC191Q8NCU4 936 aa22.73■■□□□ 1.23
PVT1-220ENST00000524165 OPTNQ96CV9 577 aa22.73■■□□□ 1.23
PVT1-220ENST00000524165 CHL1O00533 1208 aa22.72■■□□□ 1.23
PVT1-220ENST00000524165 NBPF12Q5TAG4 269 aaPredicted RBP22.72■■□□□ 1.23
PVT1-220ENST00000524165 UBE2Q1Q7Z7E8 422 aa22.72■■□□□ 1.23
PVT1-220ENST00000524165 TXNRD3Q86VQ6 643 aa22.72■■□□□ 1.23
PVT1-220ENST00000524165 KIF22Q14807 665 aa22.71■■□□□ 1.23
PVT1-220ENST00000524165 RIC3Q7Z5B4 369 aa22.71■■□□□ 1.23
PVT1-220ENST00000524165 BRI3BPQ8WY22 251 aa22.71■■□□□ 1.23
PVT1-220ENST00000524165 LEMD3Q9Y2U8 911 aa22.71■■□□□ 1.23
PVT1-220ENST00000524165 SOX1O00570 391 aaPredicted RBP22.7■■□□□ 1.22
PVT1-220ENST00000524165 MYO1BO43795 1136 aa22.7■■□□□ 1.22
PVT1-220ENST00000524165 GTF2IP78347 998 aa22.7■■□□□ 1.22
PVT1-220ENST00000524165 ELP3Q9H9T3 547 aa22.7■■□□□ 1.22
PVT1-220ENST00000524165 ZBTB7BO15156 539 aaPredicted RBP22.69■■□□□ 1.22
PVT1-220ENST00000524165 WDHD1O75717 1129 aaPredicted RBP22.69■■□□□ 1.22
PVT1-220ENST00000524165 GTF2A2P52657 109 aa22.69■■□□□ 1.22
PVT1-220ENST00000524165 LACTBP83111 547 aaPredicted RBP22.69■■□□□ 1.22
PVT1-220ENST00000524165 GOLGA2Q08379 1002 aa22.69■■□□□ 1.22
PVT1-220ENST00000524165 CCL15-CCL14A0A0B4J2E2 113 aa22.68■■□□□ 1.22
PVT1-220ENST00000524165 GJA8P48165 433 aa22.68■■□□□ 1.22
PVT1-220ENST00000524165 MTFR1Q15390 333 aa22.68■■□□□ 1.22
PVT1-220ENST00000524165 CCL15Q16663 113 aa22.68■■□□□ 1.22
PVT1-220ENST00000524165 LRCH3Q96II8 777 aa22.68■■□□□ 1.22
PVT1-220ENST00000524165 ARHGAP39Q9C0H5 1083 aa22.68■■□□□ 1.22
PVT1-220ENST00000524165 TLR2O60603 784 aa22.67■■□□□ 1.22
PVT1-220ENST00000524165 CTSWP56202 376 aa22.67■■□□□ 1.22
PVT1-220ENST00000524165 FAM43AQ8N2R8 423 aa22.67■■□□□ 1.22
PVT1-220ENST00000524165 MYD88Q99836 296 aa22.67■■□□□ 1.22
PVT1-220ENST00000524165 CWC25Q9NXE8 425 aaPredicted RBP22.67■■□□□ 1.22
PVT1-220ENST00000524165 UNC80Q8N2C7 3258 aa22.66■■□□□ 1.22
PVT1-220ENST00000524165 SPDYE2BA6NHP3 402 aa22.66■■□□□ 1.22
PVT1-220ENST00000524165 GJB1P08034 283 aa22.66■■□□□ 1.22
PVT1-220ENST00000524165 SPDYE6P0CI01 402 aa22.66■■□□□ 1.22
PVT1-220ENST00000524165 TMPOP42166 694 aaKnown RBP22.66■■□□□ 1.22
PVT1-220ENST00000524165 GPR153Q6NV75 609 aa22.66■■□□□ 1.22
PVT1-220ENST00000524165 ZCCHC17Q9NP64 241 aaKnown RBP22.66■■□□□ 1.22
PVT1-220ENST00000524165 CLRN2A0PK11 232 aa22.65■■□□□ 1.22
PVT1-220ENST00000524165 RASA3Q14644 834 aa22.65■■□□□ 1.22
PVT1-220ENST00000524165 JARID2Q92833 1246 aaPredicted RBP22.65■■□□□ 1.22
PVT1-220ENST00000524165 VEZTQ9HBM0 779 aa22.65■■□□□ 1.22
PVT1-220ENST00000524165 PCDHAC2Q9Y5I4 1007 aa22.65■■□□□ 1.22
PVT1-220ENST00000524165 CFAP100Q494V2 611 aa22.64■■□□□ 1.21
PVT1-220ENST00000524165 CERS5Q8N5B7 392 aa22.64■■□□□ 1.21
PVT1-220ENST00000524165 TTLL11Q8NHH1 800 aa22.64■■□□□ 1.21
PVT1-220ENST00000524165 PRMT6Q96LA8 375 aaPredicted RBP22.64■■□□□ 1.21
PVT1-220ENST00000524165 KLRK1P26718 216 aa22.63■■□□□ 1.21
PVT1-220ENST00000524165 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.63■■□□□ 1.21
PVT1-220ENST00000524165 CNKSR2Q8WXI2 1034 aa22.62■■□□□ 1.21
PVT1-220ENST00000524165 ANKRD2Q9GZV1 360 aa22.62■■□□□ 1.21
PVT1-220ENST00000524165 GREM2Q9H772 168 aa22.62■■□□□ 1.21
PVT1-220ENST00000524165 CD209Q9NNX6 404 aa22.62■■□□□ 1.21
PVT1-220ENST00000524165 GRK4P32298 578 aa22.61■■□□□ 1.21
PVT1-220ENST00000524165 TNFAIP1Q13829 316 aa22.61■■□□□ 1.21
PVT1-220ENST00000524165 HELBQ8NG08 1087 aaPredicted RBP22.61■■□□□ 1.21
PVT1-220ENST00000524165 SRRDQ9UH36 339 aa22.61■■□□□ 1.21
PVT1-220ENST00000524165 STXBP5LQ9Y2K9 1186 aa22.61■■□□□ 1.21
PVT1-220ENST00000524165 LAS1LQ9Y4W2 734 aaKnown RBP22.61■■□□□ 1.21
PVT1-220ENST00000524165 CCL5P13501 91 aa22.6■■□□□ 1.21
PVT1-220ENST00000524165 FKBP1AP62942 108 aaKnown RBP22.6■■□□□ 1.21
PVT1-220ENST00000524165 VGLL4Q14135 290 aa22.6■■□□□ 1.21
PVT1-220ENST00000524165 DUSP27Q5VZP5 1158 aa22.6■■□□□ 1.21
PVT1-220ENST00000524165 PHAXQ9H814 394 aaKnown RBP22.6■■□□□ 1.21
PVT1-220ENST00000524165 EVI5O60447 810 aa22.59■■□□□ 1.21
PVT1-220ENST00000524165 FARP2O94887 1054 aaPredicted RBP22.59■■□□□ 1.21
PVT1-220ENST00000524165 CETPP11597 493 aa22.59■■□□□ 1.21
PVT1-220ENST00000524165 HOXD10P28358 340 aa22.59■■□□□ 1.21
PVT1-220ENST00000524165 IGHMBP2P38935 993 aaKnown RBP22.59■■□□□ 1.21
PVT1-220ENST00000524165 MAP3K9P80192 1104 aa22.59■■□□□ 1.21
PVT1-220ENST00000524165 METTL22Q9BUU2 404 aaPredicted RBP22.59■■□□□ 1.21
PVT1-220ENST00000524165 COL25A1Q9BXS0 654 aaPredicted RBP22.59■■□□□ 1.21
PVT1-220ENST00000524165 RNF208Q9H0X6 261 aa22.59■■□□□ 1.21
PVT1-220ENST00000524165 RIPOR2Q9Y4F9 1068 aa22.59■■□□□ 1.21
PVT1-220ENST00000524165 CSADQ9Y600 493 aa22.59■■□□□ 1.21
PVT1-220ENST00000524165 ARAP2Q8WZ64 1704 aa22.59■■□□□ 1.21
PVT1-220ENST00000524165 AOX1Q06278 1338 aa22.58■■□□□ 1.21
PVT1-220ENST00000524165 F8W031 263 aaPredicted RBP22.58■■□□□ 1.21
PVT1-220ENST00000524165 DEFB123Q8N688 67 aa22.58■■□□□ 1.21
PVT1-220ENST00000524165 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.58■■□□□ 1.21
PVT1-220ENST00000524165 RAET1EQ8TD07 263 aa22.58■■□□□ 1.21
PVT1-220ENST00000524165 TRIM47Q96LD4 638 aa22.58■■□□□ 1.21
PVT1-220ENST00000524165 CAPN2P17655 700 aa22.57■■□□□ 1.2
PVT1-220ENST00000524165 TEPSINQ96N21 525 aa22.57■■□□□ 1.2
PVT1-220ENST00000524165 STAP2Q9UGK3 403 aa22.57■■□□□ 1.2
PVT1-220ENST00000524165 SPDYE5A6NIY4 337 aa22.56■■□□□ 1.2
PVT1-220ENST00000524165 BTBD19C9JJ37 291 aa22.56■■□□□ 1.2
PVT1-220ENST00000524165 PSMC4P43686 418 aa22.56■■□□□ 1.2
PVT1-220ENST00000524165 KCNJ4P48050 445 aa22.56■■□□□ 1.2
PVT1-220ENST00000524165 UBXN2AP68543 259 aa22.56■■□□□ 1.2
PVT1-220ENST00000524165 SPDYE2Q495Y8 402 aa22.56■■□□□ 1.2
PVT1-220ENST00000524165 C17orf99Q6UX52 265 aa22.56■■□□□ 1.2
PVT1-220ENST00000524165 U2AF1L4Q8WU68 220 aaKnown RBP22.56■■□□□ 1.2
PVT1-220ENST00000524165 ALPK3Q96L96 1907 aa22.55■■□□□ 1.2
PVT1-220ENST00000524165 OSBPP22059 807 aa22.55■■□□□ 1.2
PVT1-220ENST00000524165 CTGFP29279 349 aa22.55■■□□□ 1.2
PVT1-220ENST00000524165 BMP8BP34820 402 aa22.55■■□□□ 1.2
PVT1-220ENST00000524165 RBM5P52756 815 aaKnown RBP eCLIP22.55■■□□□ 1.2
PVT1-220ENST00000524165 C15orf52Q6ZUT6 534 aaKnown RBP22.55■■□□□ 1.2
PVT1-220ENST00000524165 IRS2Q9Y4H2 1338 aa22.55■■□□□ 1.2
PVT1-220ENST00000524165 IL1R1P14778 569 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms