RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 SSBP4Q9BWG4 385 aaPredicted RBP6.57□□□□□ -1.36
PCM1-220ENST00000523896 CARD10Q9BWT7 1032 aa6.57□□□□□ -1.36
PCM1-220ENST00000523896 CHRDQ9H2X0 955 aa6.57□□□□□ -1.36
PCM1-220ENST00000523896 SALL4Q9UJQ4 1053 aa6.57□□□□□ -1.36
PCM1-220ENST00000523896 FOXD3Q9UJU5 478 aaPredicted RBP6.57□□□□□ -1.36
PCM1-220ENST00000523896 PNMA6FA0A0J9YX94 578 aa6.56□□□□□ -1.36
PCM1-220ENST00000523896 EIF1AYO14602 144 aaKnown RBP6.56□□□□□ -1.36
PCM1-220ENST00000523896 CPNE3O75131 537 aaKnown RBP6.56□□□□□ -1.36
PCM1-220ENST00000523896 ALX3O95076 343 aa6.56□□□□□ -1.36
PCM1-220ENST00000523896 ITGB7P26010 798 aa6.56□□□□□ -1.36
PCM1-220ENST00000523896 PIP4K2BP78356 416 aa6.56□□□□□ -1.36
PCM1-220ENST00000523896 FGD1P98174 961 aa6.56□□□□□ -1.36
PCM1-220ENST00000523896 DUOXA2Q1HG44 320 aa6.56□□□□□ -1.36
PCM1-220ENST00000523896 GIPC2Q8TF65 315 aa6.56□□□□□ -1.36
PCM1-220ENST00000523896 WNT8BQ93098 351 aa6.56□□□□□ -1.36
PCM1-220ENST00000523896 POP1Q99575 1024 aaKnown RBP6.56□□□□□ -1.36
PCM1-220ENST00000523896 SH2B1Q9NRF2 756 aaPredicted RBP6.56□□□□□ -1.36
PCM1-220ENST00000523896 ZNF16P17020 682 aaPredicted RBP6.55□□□□□ -1.36
PCM1-220ENST00000523896 EPHA1P21709 976 aa6.55□□□□□ -1.36
PCM1-220ENST00000523896 ATP2B2Q01814 1243 aa6.55□□□□□ -1.36
PCM1-220ENST00000523896 ZNF326Q5BKZ1 582 aaKnown RBP6.55□□□□□ -1.36
PCM1-220ENST00000523896 PRR23CQ6ZRP0 262 aa6.55□□□□□ -1.36
PCM1-220ENST00000523896 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.55□□□□□ -1.36
PCM1-220ENST00000523896 AGGF1Q8N302 714 aaeCLIP6.55□□□□□ -1.36
PCM1-220ENST00000523896 ADAM19Q9H013 955 aa6.55□□□□□ -1.36
PCM1-220ENST00000523896 ZFYVE28Q9HCC9 887 aa6.55□□□□□ -1.36
PCM1-220ENST00000523896 OSGEPQ9NPF4 335 aa6.55□□□□□ -1.36
PCM1-220ENST00000523896 DZANK1Q9NVP4 752 aa6.55□□□□□ -1.36
PCM1-220ENST00000523896 DHX15O43143 795 aaKnown RBP6.54□□□□□ -1.36
PCM1-220ENST00000523896 SART1O43290 800 aaKnown RBP6.54□□□□□ -1.36
PCM1-220ENST00000523896 PRPF40AO75400 957 aaKnown RBP6.54□□□□□ -1.36
PCM1-220ENST00000523896 LDHBP07195 334 aaKnown RBP6.54□□□□□ -1.36
PCM1-220ENST00000523896 ALG1LQ6GMV1 187 aa6.54□□□□□ -1.36
PCM1-220ENST00000523896 NBPF11Q86T75 865 aa6.54□□□□□ -1.36
PCM1-220ENST00000523896 DZIP1LQ8IYY4 767 aaKnown RBP6.54□□□□□ -1.36
PCM1-220ENST00000523896 GALNT11Q8NCW6 608 aa6.54□□□□□ -1.36
PCM1-220ENST00000523896 FBF1Q8TES7 1133 aa6.54□□□□□ -1.36
PCM1-220ENST00000523896 SLC7A3Q8WY07 619 aa6.54□□□□□ -1.36
PCM1-220ENST00000523896 OSMRQ99650 979 aa6.54□□□□□ -1.36
PCM1-220ENST00000523896 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.53□□□□□ -1.36
PCM1-220ENST00000523896 EREGO14944 169 aa6.53□□□□□ -1.36
PCM1-220ENST00000523896 GSC2O15499 205 aa6.53□□□□□ -1.36
PCM1-220ENST00000523896 FOXD4L6Q3SYB3 417 aaPredicted RBP6.53□□□□□ -1.36
PCM1-220ENST00000523896 FOXD4L3Q6VB84 417 aaPredicted RBP6.53□□□□□ -1.36
PCM1-220ENST00000523896 SLC51AQ86UW1 340 aa6.53□□□□□ -1.36
PCM1-220ENST00000523896 TMEM102Q8N9M5 508 aaPredicted RBP6.53□□□□□ -1.36
PCM1-220ENST00000523896 BSNDQ8WZ55 320 aa6.53□□□□□ -1.36
PCM1-220ENST00000523896 ZFP64Q9NPA5 681 aa6.53□□□□□ -1.36
PCM1-220ENST00000523896 EIF4EBP3O60516 100 aaPredicted RBP6.52□□□□□ -1.37
PCM1-220ENST00000523896 ACPPP15309 386 aa6.52□□□□□ -1.37
PCM1-220ENST00000523896 TAGLNQ01995 201 aaKnown RBP6.52□□□□□ -1.37
PCM1-220ENST00000523896 C19orf57Q0VDD7 668 aa6.52□□□□□ -1.37
PCM1-220ENST00000523896 UVSSAQ2YD98 709 aa6.52□□□□□ -1.37
PCM1-220ENST00000523896 USPL1Q5W0Q7 1092 aa6.52□□□□□ -1.37
PCM1-220ENST00000523896 Q6ZS46 218 aa6.52□□□□□ -1.37
PCM1-220ENST00000523896 GALNT12Q8IXK2 581 aa6.52□□□□□ -1.37
PCM1-220ENST00000523896 ASAP3Q8TDY4 903 aa6.52□□□□□ -1.37
PCM1-220ENST00000523896 UTP4Q969X6 686 aaKnown RBP6.52□□□□□ -1.37
PCM1-220ENST00000523896 CCDC74AQ96AQ1 378 aa6.52□□□□□ -1.37
PCM1-220ENST00000523896 SETDB2Q96T68 719 aa6.52□□□□□ -1.37
PCM1-220ENST00000523896 WWC3Q9ULE0 1092 aa6.52□□□□□ -1.37
PCM1-220ENST00000523896 RAXQ9Y2V3 346 aa6.52□□□□□ -1.37
PCM1-220ENST00000523896 TRPA1O75762 1119 aa6.51□□□□□ -1.37
PCM1-220ENST00000523896 FSTP19883 344 aa6.51□□□□□ -1.37
PCM1-220ENST00000523896 NLRP12P59046 1061 aa6.51□□□□□ -1.37
PCM1-220ENST00000523896 LRP8Q14114 963 aa6.51□□□□□ -1.37
PCM1-220ENST00000523896 IKBKEQ14164 716 aa6.51□□□□□ -1.37
PCM1-220ENST00000523896 ARTNQ5T4W7 220 aa6.51□□□□□ -1.37
PCM1-220ENST00000523896 ANKRD34AQ69YU3 496 aa6.51□□□□□ -1.37
PCM1-220ENST00000523896 FDX2Q6P4F2 183 aa6.51□□□□□ -1.37
PCM1-220ENST00000523896 KLHDC7BQ96G42 594 aa6.51□□□□□ -1.37
PCM1-220ENST00000523896 ZKSCAN3Q9BRR0 538 aa6.51□□□□□ -1.37
PCM1-220ENST00000523896 RUSC1Q9BVN2 902 aa6.51□□□□□ -1.37
PCM1-220ENST00000523896 RNF208Q9H0X6 261 aa6.51□□□□□ -1.37
PCM1-220ENST00000523896 STOML1Q9UBI4 398 aa6.51□□□□□ -1.37
PCM1-220ENST00000523896 GAS2O43903 313 aaKnown RBP6.5□□□□□ -1.37
PCM1-220ENST00000523896 WISP1O95388 367 aa6.5□□□□□ -1.37
PCM1-220ENST00000523896 UBASH3BQ8TF42 649 aa6.5□□□□□ -1.37
PCM1-220ENST00000523896 NXPE3Q969Y0 559 aa6.5□□□□□ -1.37
PCM1-220ENST00000523896 ZNF428Q96B54 188 aa6.5□□□□□ -1.37
PCM1-220ENST00000523896 FRMD6Q96NE9 622 aa6.5□□□□□ -1.37
PCM1-220ENST00000523896 DUSP9Q99956 384 aaKnown RBP6.5□□□□□ -1.37
PCM1-220ENST00000523896 KRTAP9-2Q9BYQ4 174 aa6.5□□□□□ -1.37
PCM1-220ENST00000523896 KCNK4Q9NYG8 393 aa6.5□□□□□ -1.37
PCM1-220ENST00000523896 SOX13Q9UN79 622 aa6.5□□□□□ -1.37
PCM1-220ENST00000523896 UNCXA6NJT0 531 aa6.49□□□□□ -1.37
PCM1-220ENST00000523896 NFKBIEO00221 500 aa6.49□□□□□ -1.37
PCM1-220ENST00000523896 DDX3YO15523 660 aaKnown RBP6.49□□□□□ -1.37
PCM1-220ENST00000523896 POLR3DP05423 398 aaPredicted RBP6.49□□□□□ -1.37
PCM1-220ENST00000523896 GNA15P30679 374 aa6.49□□□□□ -1.37
PCM1-220ENST00000523896 RBM25P49756 843 aaKnown RBP6.49□□□□□ -1.37
PCM1-220ENST00000523896 KIAA1211Q6ZU35 1233 aa6.49□□□□□ -1.37
PCM1-220ENST00000523896 HHIPQ96QV1 700 aa6.49□□□□□ -1.37
PCM1-220ENST00000523896 USP26Q9BXU7 913 aa6.49□□□□□ -1.37
PCM1-220ENST00000523896 BCL11AQ9H165 835 aa6.49□□□□□ -1.37
PCM1-220ENST00000523896 NPHS2Q9NP85 383 aa6.49□□□□□ -1.37
PCM1-220ENST00000523896 RNF112Q9ULX5 631 aa6.49□□□□□ -1.37
PCM1-220ENST00000523896 KRTAP9-6A0A140TA67 174 aa6.48□□□□□ -1.37
PCM1-220ENST00000523896 DAB2P98082 770 aa6.48□□□□□ -1.37
PCM1-220ENST00000523896 XPCQ01831 940 aaPredicted RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms