RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 INTUQ9ULD6 942 aa5.17□□□□□ -1.58
SKP1-209ENST00000522552 CHMP3Q9Y3E7 222 aa5.17□□□□□ -1.58
SKP1-209ENST00000522552 SUPT16HQ9Y5B9 1047 aaKnown RBP5.17□□□□□ -1.58
SKP1-209ENST00000522552 A0A087X0B3 334 aa5.16□□□□□ -1.58
SKP1-209ENST00000522552 FAM187AA6NFU0 413 aa5.16□□□□□ -1.58
SKP1-209ENST00000522552 CCER2I3L3R5 266 aa5.16□□□□□ -1.58
SKP1-209ENST00000522552 EML1O00423 815 aa5.16□□□□□ -1.58
SKP1-209ENST00000522552 WNT7AO00755 349 aa5.16□□□□□ -1.58
SKP1-209ENST00000522552 NRG2O14511 850 aaPredicted RBP5.16□□□□□ -1.58
SKP1-209ENST00000522552 IRS4O14654 1257 aaPredicted RBP5.16□□□□□ -1.58
SKP1-209ENST00000522552 GREM1O60565 184 aa5.16□□□□□ -1.58
SKP1-209ENST00000522552 GARTP22102 1010 aa5.16□□□□□ -1.58
SKP1-209ENST00000522552 CRKP46108 304 aa5.16□□□□□ -1.58
SKP1-209ENST00000522552 SMTNP53814 917 aa5.16□□□□□ -1.58
SKP1-209ENST00000522552 WNT7BP56706 349 aa5.16□□□□□ -1.58
SKP1-209ENST00000522552 APOBRQ0VD83 1088 aa5.16□□□□□ -1.58
SKP1-209ENST00000522552 INTS6LQ5JSJ4 861 aaKnown RBP5.16□□□□□ -1.58
SKP1-209ENST00000522552 PRPF40BQ6NWY9 871 aaKnown RBP5.16□□□□□ -1.58
SKP1-209ENST00000522552 KSR2Q6VAB6 950 aa5.16□□□□□ -1.58
SKP1-209ENST00000522552 SPATC1Q76KD6 591 aa5.16□□□□□ -1.58
SKP1-209ENST00000522552 TREML1Q86YW5 311 aa5.16□□□□□ -1.58
SKP1-209ENST00000522552 NIM1KQ8IY84 436 aa5.16□□□□□ -1.58
SKP1-209ENST00000522552 TRMT44Q8IYL2 757 aaKnown RBP5.16□□□□□ -1.58
SKP1-209ENST00000522552 ALDH16A1Q8IZ83 802 aa5.16□□□□□ -1.58
SKP1-209ENST00000522552 UBR7Q8N806 425 aa5.16□□□□□ -1.58
SKP1-209ENST00000522552 NAP1L5Q96NT1 182 aaPredicted RBP5.16□□□□□ -1.58
SKP1-209ENST00000522552 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.16□□□□□ -1.58
SKP1-209ENST00000522552 TTC24A2A3L6 582 aaPredicted RBP5.15□□□□□ -1.58
SKP1-209ENST00000522552 CFAP69A5D8W1 941 aa5.15□□□□□ -1.58
SKP1-209ENST00000522552 AKAP10O43572 662 aa5.15□□□□□ -1.58
SKP1-209ENST00000522552 RPLP1P05386 114 aaKnown RBP5.15□□□□□ -1.58
SKP1-209ENST00000522552 GSTT1P30711 240 aa5.15□□□□□ -1.58
SKP1-209ENST00000522552 GUCY2FP51841 1108 aa5.15□□□□□ -1.58
SKP1-209ENST00000522552 HIRAP54198 1017 aaPredicted RBP5.15□□□□□ -1.58
SKP1-209ENST00000522552 PRR20EP86478 221 aa5.15□□□□□ -1.58
SKP1-209ENST00000522552 PRR20CP86479 221 aa5.15□□□□□ -1.58
SKP1-209ENST00000522552 PRR20DP86480 221 aa5.15□□□□□ -1.58
SKP1-209ENST00000522552 PRR20BP86481 221 aa5.15□□□□□ -1.58
SKP1-209ENST00000522552 PRR20AP86496 221 aa5.15□□□□□ -1.58
SKP1-209ENST00000522552 RAPGEF1Q13905 1077 aa5.15□□□□□ -1.58
SKP1-209ENST00000522552 GRIN2CQ14957 1233 aa5.15□□□□□ -1.58
SKP1-209ENST00000522552 CHPFQ8IZ52 775 aa5.15□□□□□ -1.58
SKP1-209ENST00000522552 CYP4X1Q8N118 509 aa5.15□□□□□ -1.58
SKP1-209ENST00000522552 NINJ1Q92982 152 aa5.15□□□□□ -1.58
SKP1-209ENST00000522552 ASPSCR1Q9BZE9 553 aa5.15□□□□□ -1.58
SKP1-209ENST00000522552 PDE8AO60658 829 aa5.15□□□□□ -1.59
SKP1-209ENST00000522552 KATNA1O75449 491 aa5.15□□□□□ -1.59
SKP1-209ENST00000522552 SOX5P35711 763 aa5.15□□□□□ -1.59
SKP1-209ENST00000522552 GIPRP48546 466 aa5.15□□□□□ -1.59
SKP1-209ENST00000522552 GRM2Q14416 872 aa5.15□□□□□ -1.59
SKP1-209ENST00000522552 SLC4A10Q6U841 1118 aa5.15□□□□□ -1.59
SKP1-209ENST00000522552 RNF180Q86T96 592 aa5.15□□□□□ -1.59
SKP1-209ENST00000522552 C3orf58Q8NDZ4 430 aa5.15□□□□□ -1.59
SKP1-209ENST00000522552 SNX29Q8TEQ0 813 aa5.15□□□□□ -1.59
SKP1-209ENST00000522552 NKD1Q969G9 470 aa5.15□□□□□ -1.59
SKP1-209ENST00000522552 ZFYVE28Q9HCC9 887 aa5.15□□□□□ -1.59
SKP1-209ENST00000522552 JADE2Q9NQC1 790 aa5.15□□□□□ -1.59
SKP1-209ENST00000522552 NRBP1Q9UHY1 535 aa5.15□□□□□ -1.59
SKP1-209ENST00000522552 HCN4Q9Y3Q4 1203 aa5.15□□□□□ -1.59
SKP1-209ENST00000522552 TLL2Q9Y6L7 1015 aa5.15□□□□□ -1.59
SKP1-209ENST00000522552 SERTM1A2A2V5 107 aa5.14□□□□□ -1.59
SKP1-209ENST00000522552 J3QL48 77 aa5.14□□□□□ -1.59
SKP1-209ENST00000522552 NPHP1O15259 732 aa5.14□□□□□ -1.59
SKP1-209ENST00000522552 ZNF500O60304 480 aaPredicted RBP5.14□□□□□ -1.59
SKP1-209ENST00000522552 GADD45BO75293 160 aaPredicted RBP5.14□□□□□ -1.59
SKP1-209ENST00000522552 GJB6O95452 261 aa5.14□□□□□ -1.59
SKP1-209ENST00000522552 ALDH1A1P00352 501 aa5.14□□□□□ -1.59
SKP1-209ENST00000522552 POLR3DP05423 398 aaPredicted RBP5.14□□□□□ -1.59
SKP1-209ENST00000522552 LIG1P18858 919 aa5.14□□□□□ -1.59
SKP1-209ENST00000522552 NEK2P51955 445 aa5.14□□□□□ -1.59
SKP1-209ENST00000522552 EIF6P56537 245 aaKnown RBP5.14□□□□□ -1.59
SKP1-209ENST00000522552 SSRP1Q08945 709 aaKnown RBP5.14□□□□□ -1.59
SKP1-209ENST00000522552 MAP3K11Q16584 847 aa5.14□□□□□ -1.59
SKP1-209ENST00000522552 FXNQ16595 210 aa5.14□□□□□ -1.59
SKP1-209ENST00000522552 TMEM95Q3KNT9 176 aa5.14□□□□□ -1.59
SKP1-209ENST00000522552 PKDCCQ504Y2 493 aa5.14□□□□□ -1.59
SKP1-209ENST00000522552 INO80DQ53TQ3 878 aaPredicted RBP5.14□□□□□ -1.59
SKP1-209ENST00000522552 LARP1BQ659C4 914 aaKnown RBP5.14□□□□□ -1.59
SKP1-209ENST00000522552 SLITRK4Q8IW52 837 aa5.14□□□□□ -1.59
SKP1-209ENST00000522552 PHC3Q8NDX5 983 aa5.14□□□□□ -1.59
SKP1-209ENST00000522552 E2F7Q96AV8 911 aa5.14□□□□□ -1.59
SKP1-209ENST00000522552 CEP63Q96MT8 703 aa5.14□□□□□ -1.59
SKP1-209ENST00000522552 TNKS2Q9H2K2 1166 aa5.14□□□□□ -1.59
SKP1-209ENST00000522552 PPCSQ9HAB8 311 aa5.14□□□□□ -1.59
SKP1-209ENST00000522552 ANAPC4Q9UJX5 808 aa5.14□□□□□ -1.59
SKP1-209ENST00000522552 TLR6Q9Y2C9 796 aa5.14□□□□□ -1.59
SKP1-209ENST00000522552 SCINQ9Y6U3 715 aa5.14□□□□□ -1.59
SKP1-209ENST00000522552 TBX3O15119 743 aa5.13□□□□□ -1.59
SKP1-209ENST00000522552 PF4P02776 101 aa5.13□□□□□ -1.59
SKP1-209ENST00000522552 VARSP26640 1264 aaKnown RBP5.13□□□□□ -1.59
SKP1-209ENST00000522552 ARID5BQ14865 1188 aa5.13□□□□□ -1.59
SKP1-209ENST00000522552 MAPRE1Q15691 268 aaKnown RBP5.13□□□□□ -1.59
SKP1-209ENST00000522552 AKAP4Q5JQC9 854 aa5.13□□□□□ -1.59
SKP1-209ENST00000522552 PERM1Q5SV97 790 aa5.13□□□□□ -1.59
SKP1-209ENST00000522552 IFNL3Q8IZI9 196 aa5.13□□□□□ -1.59
SKP1-209ENST00000522552 CNPY4Q8N129 248 aa5.13□□□□□ -1.59
SKP1-209ENST00000522552 AFAP1L2Q8N4X5 818 aa5.13□□□□□ -1.59
SKP1-209ENST00000522552 PAF1Q8N7H5 531 aa5.13□□□□□ -1.59
SKP1-209ENST00000522552 GOLM1Q8NBJ4 401 aa5.13□□□□□ -1.59
SKP1-209ENST00000522552 ATL2Q8NHH9 583 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms