RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 ZBTB22O15209 634 aa17.24■□□□□ 0.35
SDC2-203ENST00000519587 ATP5JP18859 108 aa17.24■□□□□ 0.35
SDC2-203ENST00000519587 PDE4AP27815 886 aa17.24■□□□□ 0.35
SDC2-203ENST00000519587 PODNQ7Z5L7 613 aa17.24■□□□□ 0.35
SDC2-203ENST00000519587 PLEKHM2Q8IWE5 1019 aa17.24■□□□□ 0.35
SDC2-203ENST00000519587 OSBPL3Q9H4L5 887 aa17.24■□□□□ 0.35
SDC2-203ENST00000519587 CD209Q9NNX6 404 aa17.24■□□□□ 0.35
SDC2-203ENST00000519587 DENND2AQ9ULE3 1009 aa17.24■□□□□ 0.35
SDC2-203ENST00000519587 ECE2O60344 883 aa17.23■□□□□ 0.35
SDC2-203ENST00000519587 IL1R1P14778 569 aa17.23■□□□□ 0.35
SDC2-203ENST00000519587 RGS3P49796 1198 aa17.23■□□□□ 0.35
SDC2-203ENST00000519587 TNS4Q8IZW8 715 aa17.23■□□□□ 0.35
SDC2-203ENST00000519587 PRELPP51888 382 aa17.22■□□□□ 0.35
SDC2-203ENST00000519587 RASGRF1Q13972 1273 aa17.22■□□□□ 0.35
SDC2-203ENST00000519587 DOK7Q18PE1 504 aa17.22■□□□□ 0.35
SDC2-203ENST00000519587 TDRD7Q8NHU6 1098 aaKnown RBP17.22■□□□□ 0.35
SDC2-203ENST00000519587 DBNDD1Q9H9R9 158 aa17.22■□□□□ 0.35
SDC2-203ENST00000519587 SCN9AQ15858 1988 aa17.21■□□□□ 0.35
SDC2-203ENST00000519587 MAST2Q6P0Q8 1798 aa17.21■□□□□ 0.35
SDC2-203ENST00000519587 TSHZ3Q63HK5 1081 aa17.21■□□□□ 0.35
SDC2-203ENST00000519587 SPATA5Q8NB90 893 aa17.21■□□□□ 0.35
SDC2-203ENST00000519587 ZNRF3Q9ULT6 936 aa17.21■□□□□ 0.35
SDC2-203ENST00000519587 IQSEC3Q9UPP2 1182 aaPredicted RBP17.21■□□□□ 0.35
SDC2-203ENST00000519587 COL4A5P29400 1685 aa17.2■□□□□ 0.34
SDC2-203ENST00000519587 MYH7P12883 1935 aa17.2■□□□□ 0.34
SDC2-203ENST00000519587 DOCK2Q92608 1830 aa17.2■□□□□ 0.34
SDC2-203ENST00000519587 MCAMP43121 646 aa17.2■□□□□ 0.34
SDC2-203ENST00000519587 CHAF1AQ13111 956 aaPredicted RBP17.2■□□□□ 0.34
SDC2-203ENST00000519587 ZGPATQ8N5A5 531 aaKnown RBP17.2■□□□□ 0.34
SDC2-203ENST00000519587 WDR66Q8TBY9 1149 aa17.2■□□□□ 0.34
SDC2-203ENST00000519587 PI4K2BQ8TCG2 481 aa17.2■□□□□ 0.34
SDC2-203ENST00000519587 TBC1D22AQ8WUA7 517 aa17.2■□□□□ 0.34
SDC2-203ENST00000519587 KLRG1Q96E93 195 aa17.2■□□□□ 0.34
SDC2-203ENST00000519587 DNAJC2Q99543 621 aaKnown RBP17.2■□□□□ 0.34
SDC2-203ENST00000519587 HAUS7Q99871 368 aa17.2■□□□□ 0.34
SDC2-203ENST00000519587 ZNF646O15015 1829 aaPredicted RBP17.19■□□□□ 0.34
SDC2-203ENST00000519587 COL1A1P02452 1464 aaPredicted RBP17.19■□□□□ 0.34
SDC2-203ENST00000519587 TTF1Q15361 905 aaPredicted RBP17.19■□□□□ 0.34
SDC2-203ENST00000519587 TTC22Q5TAA0 569 aa17.19■□□□□ 0.34
SDC2-203ENST00000519587 JMYQ8N9B5 988 aa17.19■□□□□ 0.34
SDC2-203ENST00000519587 FBXW7Q969H0 707 aa17.19■□□□□ 0.34
SDC2-203ENST00000519587 BOLA2Q9H3K6 86 aa17.19■□□□□ 0.34
SDC2-203ENST00000519587 RNF181Q9P0P0 153 aa17.19■□□□□ 0.34
SDC2-203ENST00000519587 HMG20BQ9P0W2 317 aa17.19■□□□□ 0.34
SDC2-203ENST00000519587 FAM205AQ6ZU69 1335 aa17.19■□□□□ 0.34
SDC2-203ENST00000519587 ZC3H4Q9UPT8 1303 aaKnown RBP17.19■□□□□ 0.34
SDC2-203ENST00000519587 EIF6P56537 245 aaKnown RBP17.18■□□□□ 0.34
SDC2-203ENST00000519587 SCARF1Q14162 830 aa17.18■□□□□ 0.34
SDC2-203ENST00000519587 PAG1Q9NWQ8 432 aa17.18■□□□□ 0.34
SDC2-203ENST00000519587 USP17L3A6NCW0 530 aa17.17■□□□□ 0.34
SDC2-203ENST00000519587 USP17L4A6NCW7 530 aa17.17■□□□□ 0.34
SDC2-203ENST00000519587 GTF2IP78347 998 aa17.17■□□□□ 0.34
SDC2-203ENST00000519587 HTRA3P83110 453 aa17.17■□□□□ 0.34
SDC2-203ENST00000519587 TNIP1Q15025 636 aa17.17■□□□□ 0.34
SDC2-203ENST00000519587 LRRFIP1Q32MZ4 808 aaKnown RBP17.17■□□□□ 0.34
SDC2-203ENST00000519587 STRIP1Q5VSL9 837 aa17.17■□□□□ 0.34
SDC2-203ENST00000519587 SPTY2D1Q68D10 685 aaPredicted RBP17.17■□□□□ 0.34
SDC2-203ENST00000519587 USP17L1Q7RTZ2 530 aa17.17■□□□□ 0.34
SDC2-203ENST00000519587 CNTROBQ8N137 903 aa17.17■□□□□ 0.34
SDC2-203ENST00000519587 NMRK2Q9NPI5 230 aa17.17■□□□□ 0.34
SDC2-203ENST00000519587 SNRKQ9NRH2 765 aa17.17■□□□□ 0.34
SDC2-203ENST00000519587 MYO3BQ8WXR4 1341 aa17.17■□□□□ 0.34
SDC2-203ENST00000519587 SALL1Q9NSC2 1324 aa17.17■□□□□ 0.34
SDC2-203ENST00000519587 GOLIM4O00461 696 aa17.16■□□□□ 0.34
SDC2-203ENST00000519587 IGSF3O75054 1194 aa17.16■□□□□ 0.34
SDC2-203ENST00000519587 ZAP70P43403 619 aa17.16■□□□□ 0.34
SDC2-203ENST00000519587 FKBP1AP62942 108 aaKnown RBP17.16■□□□□ 0.34
SDC2-203ENST00000519587 C9orf131Q5VYM1 1079 aa17.16■□□□□ 0.34
SDC2-203ENST00000519587 TTLL5Q6EMB2 1281 aa17.16■□□□□ 0.34
SDC2-203ENST00000519587 PI16Q6UXB8 463 aa17.16■□□□□ 0.34
SDC2-203ENST00000519587 RBM46Q8TBY0 533 aaKnown RBP17.16■□□□□ 0.34
SDC2-203ENST00000519587 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.16■□□□□ 0.34
SDC2-203ENST00000519587 YDJCA8MPS7 323 aa17.15■□□□□ 0.34
SDC2-203ENST00000519587 TRIM6-TRIM34B2RNG4 842 aa17.15■□□□□ 0.34
SDC2-203ENST00000519587 BMP2KLQ5H9B9 411 aa17.15■□□□□ 0.34
SDC2-203ENST00000519587 MFSD14BQ5SR56 506 aa17.15■□□□□ 0.34
SDC2-203ENST00000519587 CIAPIN1Q6FI81 312 aa17.15■□□□□ 0.34
SDC2-203ENST00000519587 SKAP1Q86WV1 359 aa17.15■□□□□ 0.34
SDC2-203ENST00000519587 EVI5LQ96CN4 794 aa17.15■□□□□ 0.34
SDC2-203ENST00000519587 SUGT1Q9Y2Z0 365 aa17.15■□□□□ 0.34
SDC2-203ENST00000519587 MAST3O60307 1309 aa17.15■□□□□ 0.34
SDC2-203ENST00000519587 RFX7Q2KHR2 1363 aa17.15■□□□□ 0.34
SDC2-203ENST00000519587 MYO5AQ9Y4I1 1855 aaKnown RBP17.14■□□□□ 0.33
SDC2-203ENST00000519587 FZD9O00144 591 aa17.14■□□□□ 0.33
SDC2-203ENST00000519587 RAD17O75943 681 aa17.14■□□□□ 0.33
SDC2-203ENST00000519587 TMED8Q6PL24 325 aaPredicted RBP17.14■□□□□ 0.33
SDC2-203ENST00000519587 TICAM2Q86XR7 235 aa17.14■□□□□ 0.33
SDC2-203ENST00000519587 LRP2BPQ9P2M1 347 aa17.14■□□□□ 0.33
SDC2-203ENST00000519587 ABCF2Q9UG63 623 aa17.14■□□□□ 0.33
SDC2-203ENST00000519587 CYP2E1P05181 493 aaPredicted RBP17.13■□□□□ 0.33
SDC2-203ENST00000519587 LDHBP07195 334 aaKnown RBP17.13■□□□□ 0.33
SDC2-203ENST00000519587 MAP3K12Q12852 859 aa17.13■□□□□ 0.33
SDC2-203ENST00000519587 DACT2Q5SW24 774 aa17.13■□□□□ 0.33
SDC2-203ENST00000519587 ZSCAN25Q6NSZ9 544 aa17.13■□□□□ 0.33
SDC2-203ENST00000519587 KBTBD3Q8NAB2 608 aa17.13■□□□□ 0.33
SDC2-203ENST00000519587 FSD1Q9BTV5 496 aa17.13■□□□□ 0.33
SDC2-203ENST00000519587 JAG2Q9Y219 1238 aa17.13■□□□□ 0.33
SDC2-203ENST00000519587 PSMD14O00487 310 aa17.12■□□□□ 0.33
SDC2-203ENST00000519587 IDH1O75874 414 aaKnown RBP17.12■□□□□ 0.33
SDC2-203ENST00000519587 MAP4K4O95819 1239 aaPredicted RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms