RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 DUSP9Q99956 384 aaKnown RBP9.21□□□□□ -0.94
SQLE-203ENST00000518931 OSBPL7Q9BZF2 842 aa9.21□□□□□ -0.94
SQLE-203ENST00000518931 RNF19AQ9NV58 838 aa9.21□□□□□ -0.94
SQLE-203ENST00000518931 H3BRJ5 948 aa9.2□□□□□ -0.94
SQLE-203ENST00000518931 FSCN2O14926 492 aa9.2□□□□□ -0.94
SQLE-203ENST00000518931 FCGRTP55899 365 aa9.2□□□□□ -0.94
SQLE-203ENST00000518931 TMEM151AQ8N4L1 468 aa9.2□□□□□ -0.94
SQLE-203ENST00000518931 ABCB6Q9NP58 842 aa9.2□□□□□ -0.94
SQLE-203ENST00000518931 SHROOM4Q9ULL8 1493 aa9.2□□□□□ -0.94
SQLE-203ENST00000518931 KRBA1A5PL33 1030 aa9.19□□□□□ -0.94
SQLE-203ENST00000518931 SOX1O00570 391 aaPredicted RBP9.19□□□□□ -0.94
SQLE-203ENST00000518931 ELNP15502 786 aa9.19□□□□□ -0.94
SQLE-203ENST00000518931 IKBKEQ14164 716 aa9.19□□□□□ -0.94
SQLE-203ENST00000518931 PRPF40BQ6NWY9 871 aaKnown RBP9.19□□□□□ -0.94
SQLE-203ENST00000518931 MAP4K3Q8IVH8 894 aa9.19□□□□□ -0.94
SQLE-203ENST00000518931 GALNT11Q8NCW6 608 aa9.19□□□□□ -0.94
SQLE-203ENST00000518931 SLC7A3Q8WY07 619 aa9.19□□□□□ -0.94
SQLE-203ENST00000518931 CARD10Q9BWT7 1032 aa9.19□□□□□ -0.94
SQLE-203ENST00000518931 BCL2L13Q9BXK5 485 aa9.19□□□□□ -0.94
SQLE-203ENST00000518931 SPG7Q9UQ90 795 aa9.19□□□□□ -0.94
SQLE-203ENST00000518931 ITPKAP23677 461 aa9.18□□□□□ -0.94
SQLE-203ENST00000518931 HGSNATQ68CP4 663 aa9.18□□□□□ -0.94
SQLE-203ENST00000518931 DTHD1Q6ZMT9 781 aa9.18□□□□□ -0.94
SQLE-203ENST00000518931 SRA1Q9HD15 236 aaKnown RBP9.18□□□□□ -0.94
SQLE-203ENST00000518931 GIPC1O14908 333 aa9.17□□□□□ -0.94
SQLE-203ENST00000518931 APBA3O96018 575 aa9.17□□□□□ -0.94
SQLE-203ENST00000518931 ESRRAP11474 423 aaPredicted RBP9.17□□□□□ -0.94
SQLE-203ENST00000518931 PIP4K2BP78356 416 aa9.17□□□□□ -0.94
SQLE-203ENST00000518931 PCDH1Q08174 1060 aa9.17□□□□□ -0.94
SQLE-203ENST00000518931 ZNF423Q2M1K9 1284 aa9.17□□□□□ -0.94
SQLE-203ENST00000518931 SHISA2Q6UWI4 295 aa9.17□□□□□ -0.94
SQLE-203ENST00000518931 KLHL23Q8NBE8 558 aa9.17□□□□□ -0.94
SQLE-203ENST00000518931 KLHDC7BQ96G42 594 aa9.17□□□□□ -0.94
SQLE-203ENST00000518931 FRMD6Q96NE9 622 aa9.17□□□□□ -0.94
SQLE-203ENST00000518931 CLEC4MQ9H2X3 399 aaPredicted RBP9.17□□□□□ -0.94
SQLE-203ENST00000518931 SEC31BQ9NQW1 1179 aa9.17□□□□□ -0.94
SQLE-203ENST00000518931 PARP2Q9UGN5 583 aa9.17□□□□□ -0.94
SQLE-203ENST00000518931 DLL1O00548 723 aa9.16□□□□□ -0.94
SQLE-203ENST00000518931 SELPP16109 830 aa9.16□□□□□ -0.94
SQLE-203ENST00000518931 GNA15P30679 374 aa9.16□□□□□ -0.94
SQLE-203ENST00000518931 ARL4DP49703 201 aa9.16□□□□□ -0.94
SQLE-203ENST00000518931 XPCQ01831 940 aaPredicted RBP9.16□□□□□ -0.94
SQLE-203ENST00000518931 WNT8BQ93098 351 aa9.16□□□□□ -0.94
SQLE-203ENST00000518931 ZNF576Q9H609 170 aa9.16□□□□□ -0.94
SQLE-203ENST00000518931 OSGEPQ9NPF4 335 aa9.16□□□□□ -0.94
SQLE-203ENST00000518931 AKAP2Q9Y2D5 859 aa9.16□□□□□ -0.94
SQLE-203ENST00000518931 CD68P34810 354 aaPredicted RBP9.15□□□□□ -0.94
SQLE-203ENST00000518931 PTPN12Q05209 780 aaKnown RBP9.15□□□□□ -0.94
SQLE-203ENST00000518931 C19orf57Q0VDD7 668 aa9.15□□□□□ -0.94
SQLE-203ENST00000518931 IGF2-ASQ6U949 168 aa9.15□□□□□ -0.94
SQLE-203ENST00000518931 GIPC2Q8TF65 315 aa9.15□□□□□ -0.94
SQLE-203ENST00000518931 SRCIN1Q9C0H9 1055 aa9.15□□□□□ -0.94
SQLE-203ENST00000518931 C12orf49Q9H741 205 aa9.15□□□□□ -0.94
SQLE-203ENST00000518931 TM4SF5O14894 197 aa9.14□□□□□ -0.95
SQLE-203ENST00000518931 DDX3YO15523 660 aaKnown RBP9.14□□□□□ -0.95
SQLE-203ENST00000518931 SUZ12Q15022 739 aaKnown RBP9.14□□□□□ -0.95
SQLE-203ENST00000518931 DCAF11Q8TEB1 546 aa9.14□□□□□ -0.95
SQLE-203ENST00000518931 FAM161BQ96MY7 647 aa9.14□□□□□ -0.95
SQLE-203ENST00000518931 NACC1Q96RE7 527 aa9.14□□□□□ -0.95
SQLE-203ENST00000518931 KCNK4Q9NYG8 393 aa9.14□□□□□ -0.95
SQLE-203ENST00000518931 AK5Q9Y6K8 562 aa9.14□□□□□ -0.95
SQLE-203ENST00000518931 LOC105371045A0A1W2PR82 267 aa9.13□□□□□ -0.95
SQLE-203ENST00000518931 C1QTNF9BB2RNN3 333 aa9.13□□□□□ -0.95
SQLE-203ENST00000518931 C9orf172C9J069 976 aa9.13□□□□□ -0.95
SQLE-203ENST00000518931 XRCC5P13010 732 aaKnown RBP9.13□□□□□ -0.95
SQLE-203ENST00000518931 EIF4BP23588 611 aaKnown RBP9.13□□□□□ -0.95
SQLE-203ENST00000518931 GSTT1P30711 240 aa9.13□□□□□ -0.95
SQLE-203ENST00000518931 ZNF157P51786 506 aaPredicted RBP9.13□□□□□ -0.95
SQLE-203ENST00000518931 DAB2P98082 770 aa9.13□□□□□ -0.95
SQLE-203ENST00000518931 GSTM4Q03013 218 aa9.13□□□□□ -0.95
SQLE-203ENST00000518931 PSMD2Q13200 908 aa9.13□□□□□ -0.95
SQLE-203ENST00000518931 FOXD4L6Q3SYB3 417 aaPredicted RBP9.13□□□□□ -0.95
SQLE-203ENST00000518931 ZNF326Q5BKZ1 582 aaKnown RBP9.13□□□□□ -0.95
SQLE-203ENST00000518931 FOXD4L3Q6VB84 417 aaPredicted RBP9.13□□□□□ -0.95
SQLE-203ENST00000518931 CD163Q86VB7 1156 aa9.13□□□□□ -0.95
SQLE-203ENST00000518931 LENG1Q96BZ8 264 aaPredicted RBP9.13□□□□□ -0.95
SQLE-203ENST00000518931 ZFYVE1Q9HBF4 777 aa9.13□□□□□ -0.95
SQLE-203ENST00000518931 USP21Q9UK80 565 aa9.13□□□□□ -0.95
SQLE-203ENST00000518931 CHRNA4P43681 627 aa9.12□□□□□ -0.95
SQLE-203ENST00000518931 RPS26P11Q5JNZ5 115 aaPredicted RBP9.12□□□□□ -0.95
SQLE-203ENST00000518931 C3orf58Q8NDZ4 430 aa9.12□□□□□ -0.95
SQLE-203ENST00000518931 FAM8A1Q9UBU6 413 aa9.12□□□□□ -0.95
SQLE-203ENST00000518931 USP17L7P0C7H9 530 aa9.11□□□□□ -0.95
SQLE-203ENST00000518931 NLRP12P59046 1061 aa9.11□□□□□ -0.95
SQLE-203ENST00000518931 FAAP100Q0VG06 881 aa9.11□□□□□ -0.95
SQLE-203ENST00000518931 PLA2G4EQ3MJ16 856 aa9.11□□□□□ -0.95
SQLE-203ENST00000518931 TMC4Q7Z404 712 aa9.11□□□□□ -0.95
SQLE-203ENST00000518931 SOX17Q9H6I2 414 aaPredicted RBP9.11□□□□□ -0.95
SQLE-203ENST00000518931 ADAM11O75078 769 aa9.1□□□□□ -0.95
SQLE-203ENST00000518931 B3GALT4O96024 378 aa9.1□□□□□ -0.95
SQLE-203ENST00000518931 CDK11BP21127 795 aaKnown RBP9.1□□□□□ -0.95
SQLE-203ENST00000518931 DUOXA2Q1HG44 320 aa9.1□□□□□ -0.95
SQLE-203ENST00000518931 RGS22Q8NE09 1264 aa9.1□□□□□ -0.95
SQLE-203ENST00000518931 MRPL18Q9H0U6 180 aaKnown RBP9.1□□□□□ -0.95
SQLE-203ENST00000518931 CDK11AQ9UQ88 783 aaPredicted RBP9.1□□□□□ -0.95
SQLE-203ENST00000518931 ZNF16P17020 682 aaPredicted RBP9.09□□□□□ -0.95
SQLE-203ENST00000518931 NRG1Q02297 640 aaPredicted RBP9.09□□□□□ -0.95
SQLE-203ENST00000518931 DDX54Q8TDD1 881 aaKnown RBP9.09□□□□□ -0.95
SQLE-203ENST00000518931 FOXD4L4Q8WXT5 416 aaPredicted RBP9.09□□□□□ -0.95
SQLE-203ENST00000518931 MRS2Q9HD23 443 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms