RNA–Protein interactions for RNA: ENST00000517955.2

ARFGEF1-202, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 1,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-202ENST00000517955 WASHC4Q2M389 1173 aa13.98□□□□□ -0.17
ARFGEF1-202ENST00000517955 TXNRD3Q86VQ6 643 aa13.98□□□□□ -0.17
ARFGEF1-202ENST00000517955 IFNLR1Q8IU57 520 aaPredicted RBP13.98□□□□□ -0.17
ARFGEF1-202ENST00000517955 PI4K2BQ8TCG2 481 aa13.98□□□□□ -0.17
ARFGEF1-202ENST00000517955 ZC3H12CQ9C0D7 883 aaKnown RBP13.98□□□□□ -0.17
ARFGEF1-202ENST00000517955 COA1Q9GZY4 146 aa13.98□□□□□ -0.17
ARFGEF1-202ENST00000517955 GNL3LQ9NVN8 582 aaKnown RBP13.98□□□□□ -0.17
ARFGEF1-202ENST00000517955 NFKBIEO00221 500 aa13.97□□□□□ -0.17
ARFGEF1-202ENST00000517955 GALR2O43603 387 aaPredicted RBP13.97□□□□□ -0.17
ARFGEF1-202ENST00000517955 BCAMP50895 628 aa13.97□□□□□ -0.17
ARFGEF1-202ENST00000517955 GORABQ5T7V8 394 aa13.97□□□□□ -0.17
ARFGEF1-202ENST00000517955 ZNF804AQ7Z570 1209 aa13.97□□□□□ -0.17
ARFGEF1-202ENST00000517955 TICAM2Q86XR7 235 aa13.97□□□□□ -0.17
ARFGEF1-202ENST00000517955 TDRD7Q8NHU6 1098 aaKnown RBP13.97□□□□□ -0.17
ARFGEF1-202ENST00000517955 FAM212AQ96EL1 285 aa13.97□□□□□ -0.17
ARFGEF1-202ENST00000517955 TAOK3Q9H2K8 898 aa13.97□□□□□ -0.17
ARFGEF1-202ENST00000517955 AKAP11Q9UKA4 1901 aa13.97□□□□□ -0.17
ARFGEF1-202ENST00000517955 IGSF3O75054 1194 aa13.96□□□□□ -0.17
ARFGEF1-202ENST00000517955 KLRK1P26718 216 aa13.96□□□□□ -0.17
ARFGEF1-202ENST00000517955 PHKA1P46020 1223 aa13.96□□□□□ -0.17
ARFGEF1-202ENST00000517955 GYG1P46976 350 aa13.96□□□□□ -0.17
ARFGEF1-202ENST00000517955 PODNQ7Z5L7 613 aa13.96□□□□□ -0.17
ARFGEF1-202ENST00000517955 CD209Q9NNX6 404 aa13.96□□□□□ -0.17
ARFGEF1-202ENST00000517955 TTC39AQ5SRH9 613 aa13.95□□□□□ -0.18
ARFGEF1-202ENST00000517955 VPS37DQ86XT2 251 aa13.95□□□□□ -0.18
ARFGEF1-202ENST00000517955 HAUS7Q99871 368 aa13.95□□□□□ -0.18
ARFGEF1-202ENST00000517955 DENND2AQ9ULE3 1009 aa13.95□□□□□ -0.18
ARFGEF1-202ENST00000517955 GRIN3BO60391 1043 aa13.94□□□□□ -0.18
ARFGEF1-202ENST00000517955 YBX3P16989 372 aaKnown RBP eCLIP13.94□□□□□ -0.18
ARFGEF1-202ENST00000517955 IARSP41252 1262 aaKnown RBP13.94□□□□□ -0.18
ARFGEF1-202ENST00000517955 BMP2KLQ5H9B9 411 aa13.94□□□□□ -0.18
ARFGEF1-202ENST00000517955 TTC22Q5TAA0 569 aa13.94□□□□□ -0.18
ARFGEF1-202ENST00000517955 KIF12Q96FN5 646 aa13.94□□□□□ -0.18
ARFGEF1-202ENST00000517955 FAM205AQ6ZU69 1335 aa13.93□□□□□ -0.18
ARFGEF1-202ENST00000517955 PPIP5K2O43314 1243 aa13.93□□□□□ -0.18
ARFGEF1-202ENST00000517955 MCAMP43121 646 aa13.93□□□□□ -0.18
ARFGEF1-202ENST00000517955 RGS3P49796 1198 aa13.93□□□□□ -0.18
ARFGEF1-202ENST00000517955 RASGRF1Q13972 1273 aa13.93□□□□□ -0.18
ARFGEF1-202ENST00000517955 SPATA5Q8NB90 893 aa13.93□□□□□ -0.18
ARFGEF1-202ENST00000517955 GPR101Q96P66 508 aaPredicted RBP13.93□□□□□ -0.18
ARFGEF1-202ENST00000517955 HMG20BQ9P0W2 317 aa13.93□□□□□ -0.18
ARFGEF1-202ENST00000517955 SALL1Q9NSC2 1324 aa13.92□□□□□ -0.18
ARFGEF1-202ENST00000517955 CHD4Q14839 1912 aa13.92□□□□□ -0.18
ARFGEF1-202ENST00000517955 RIMBP2O15034 1052 aa13.92□□□□□ -0.18
ARFGEF1-202ENST00000517955 FKBP1AP62942 108 aaKnown RBP13.92□□□□□ -0.18
ARFGEF1-202ENST00000517955 SCARF1Q14162 830 aa13.92□□□□□ -0.18
ARFGEF1-202ENST00000517955 AOC3Q16853 763 aa13.92□□□□□ -0.18
ARFGEF1-202ENST00000517955 TMED8Q6PL24 325 aaPredicted RBP13.92□□□□□ -0.18
ARFGEF1-202ENST00000517955 SKAP1Q86WV1 359 aa13.92□□□□□ -0.18
ARFGEF1-202ENST00000517955 BOLA2Q9H3K6 86 aa13.92□□□□□ -0.18
ARFGEF1-202ENST00000517955 ZNF277Q9NRM2 450 aaPredicted RBP13.92□□□□□ -0.18
ARFGEF1-202ENST00000517955 WWC3Q9ULE0 1092 aa13.92□□□□□ -0.18
ARFGEF1-202ENST00000517955 SBF1O95248 1867 aa13.92□□□□□ -0.18
ARFGEF1-202ENST00000517955 DICER1Q9UPY3 1922 aaKnown RBP13.92□□□□□ -0.18
ARFGEF1-202ENST00000517955 GSPT1P15170 499 aaKnown RBP13.91□□□□□ -0.18
ARFGEF1-202ENST00000517955 LMNB1P20700 586 aa13.91□□□□□ -0.18
ARFGEF1-202ENST00000517955 TTF1Q15361 905 aaPredicted RBP13.91□□□□□ -0.18
ARFGEF1-202ENST00000517955 TSHZ3Q63HK5 1081 aa13.91□□□□□ -0.18
ARFGEF1-202ENST00000517955 ARHGAP27Q6ZUM4 889 aa13.91□□□□□ -0.18
ARFGEF1-202ENST00000517955 LARGE2Q8N3Y3 721 aa13.91□□□□□ -0.18
ARFGEF1-202ENST00000517955 WDR66Q8TBY9 1149 aa13.91□□□□□ -0.18
ARFGEF1-202ENST00000517955 DCBLD2Q96PD2 775 aa13.91□□□□□ -0.18
ARFGEF1-202ENST00000517955 BCL11AQ9H165 835 aa13.91□□□□□ -0.18
ARFGEF1-202ENST00000517955 MYH13Q9UKX3 1938 aa13.91□□□□□ -0.18
ARFGEF1-202ENST00000517955 PSME4Q14997 1843 aa13.9□□□□□ -0.18
ARFGEF1-202ENST00000517955 ECE2O60344 883 aa13.9□□□□□ -0.18
ARFGEF1-202ENST00000517955 CYP2E1P05181 493 aaPredicted RBP13.9□□□□□ -0.18
ARFGEF1-202ENST00000517955 POTEIP0CG38 1075 aa13.9□□□□□ -0.18
ARFGEF1-202ENST00000517955 PRELPP51888 382 aa13.9□□□□□ -0.18
ARFGEF1-202ENST00000517955 DCAF8Q5TAQ9 597 aa13.9□□□□□ -0.18
ARFGEF1-202ENST00000517955 STRIP1Q5VSL9 837 aa13.9□□□□□ -0.18
ARFGEF1-202ENST00000517955 ZGPATQ8N5A5 531 aaKnown RBP13.9□□□□□ -0.18
ARFGEF1-202ENST00000517955 TBC1D22AQ8WUA7 517 aa13.9□□□□□ -0.18
ARFGEF1-202ENST00000517955 EVI5LQ96CN4 794 aa13.9□□□□□ -0.18
ARFGEF1-202ENST00000517955 MS4A3Q96HJ5 214 aa13.9□□□□□ -0.18
ARFGEF1-202ENST00000517955 PAG1Q9NWQ8 432 aa13.9□□□□□ -0.18
ARFGEF1-202ENST00000517955 ZNRF3Q9ULT6 936 aa13.9□□□□□ -0.18
ARFGEF1-202ENST00000517955 SUGT1Q9Y2Z0 365 aa13.9□□□□□ -0.18
ARFGEF1-202ENST00000517955 COL1A1P02452 1464 aaPredicted RBP13.9□□□□□ -0.18
ARFGEF1-202ENST00000517955 CCDC88AQ3V6T2 1871 aa13.89□□□□□ -0.19
ARFGEF1-202ENST00000517955 COL4A5P29400 1685 aa13.89□□□□□ -0.19
ARFGEF1-202ENST00000517955 RFX7Q2KHR2 1363 aa13.89□□□□□ -0.19
ARFGEF1-202ENST00000517955 G3V3G9 751 aa13.89□□□□□ -0.19
ARFGEF1-202ENST00000517955 ZAP70P43403 619 aa13.89□□□□□ -0.19
ARFGEF1-202ENST00000517955 GPR162Q16538 588 aa13.89□□□□□ -0.19
ARFGEF1-202ENST00000517955 DOK7Q18PE1 504 aa13.89□□□□□ -0.19
ARFGEF1-202ENST00000517955 NIM1KQ8IY84 436 aa13.89□□□□□ -0.19
ARFGEF1-202ENST00000517955 CNTROBQ8N137 903 aa13.89□□□□□ -0.19
ARFGEF1-202ENST00000517955 KBTBD3Q8NAB2 608 aa13.89□□□□□ -0.19
ARFGEF1-202ENST00000517955 JDP2Q8WYK2 163 aa13.89□□□□□ -0.19
ARFGEF1-202ENST00000517955 SPOCK2Q92563 424 aa13.89□□□□□ -0.19
ARFGEF1-202ENST00000517955 DBNDD1Q9H9R9 158 aa13.89□□□□□ -0.19
ARFGEF1-202ENST00000517955 SCN9AQ15858 1988 aa13.89□□□□□ -0.19
ARFGEF1-202ENST00000517955 UTRNP46939 3433 aa13.89□□□□□ -0.19
ARFGEF1-202ENST00000517955 ZNF646O15015 1829 aaPredicted RBP13.88□□□□□ -0.19
ARFGEF1-202ENST00000517955 USP17L3A6NCW0 530 aa13.88□□□□□ -0.19
ARFGEF1-202ENST00000517955 USP17L4A6NCW7 530 aa13.88□□□□□ -0.19
ARFGEF1-202ENST00000517955 YDJCA8MPS7 323 aa13.88□□□□□ -0.19
ARFGEF1-202ENST00000517955 FZD9O00144 591 aa13.88□□□□□ -0.19
ARFGEF1-202ENST00000517955 FRAT2O75474 233 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms