RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 ANKRD2Q9GZV1 360 aa6.49□□□□□ -1.37
SCARNA20.4-201ENST00000516969 PUS7LQ9H0K6 701 aaKnown RBP6.49□□□□□ -1.37
SCARNA20.4-201ENST00000516969 PDRG1Q9NUG6 133 aa6.49□□□□□ -1.37
SCARNA20.4-201ENST00000516969 LIMCH1Q9UPQ0 1083 aa6.49□□□□□ -1.37
SCARNA20.4-201ENST00000516969 PDS5AQ29RF7 1337 aaKnown RBP6.49□□□□□ -1.37
SCARNA20.4-201ENST00000516969 QSER1Q2KHR3 1735 aa6.48□□□□□ -1.37
SCARNA20.4-201ENST00000516969 CACNA1SQ13698 1873 aa6.48□□□□□ -1.37
SCARNA20.4-201ENST00000516969 SEMA3EO15041 775 aa6.48□□□□□ -1.37
SCARNA20.4-201ENST00000516969 FGAP02671 866 aa6.48□□□□□ -1.37
SCARNA20.4-201ENST00000516969 CPA1P15085 419 aa6.48□□□□□ -1.37
SCARNA20.4-201ENST00000516969 RPS6KB1P23443 525 aa6.48□□□□□ -1.37
SCARNA20.4-201ENST00000516969 ST5P78524 1137 aa6.48□□□□□ -1.37
SCARNA20.4-201ENST00000516969 EXOSC10Q01780 885 aaKnown RBP6.48□□□□□ -1.37
SCARNA20.4-201ENST00000516969 MAP3K12Q12852 859 aa6.48□□□□□ -1.37
SCARNA20.4-201ENST00000516969 GRAPQ13588 217 aa6.48□□□□□ -1.37
SCARNA20.4-201ENST00000516969 ALX1Q15699 326 aa6.48□□□□□ -1.37
SCARNA20.4-201ENST00000516969 WASHC4Q2M389 1173 aa6.48□□□□□ -1.37
SCARNA20.4-201ENST00000516969 C15orf52Q6ZUT6 534 aaKnown RBP6.48□□□□□ -1.37
SCARNA20.4-201ENST00000516969 NLGN1Q8N2Q7 840 aa6.48□□□□□ -1.37
SCARNA20.4-201ENST00000516969 GRAPLQ8TC17 118 aaPredicted RBP6.48□□□□□ -1.37
SCARNA20.4-201ENST00000516969 ZSCAN31Q96LW9 406 aaPredicted RBP6.48□□□□□ -1.37
SCARNA20.4-201ENST00000516969 NEK1Q96PY6 1258 aa6.48□□□□□ -1.37
SCARNA20.4-201ENST00000516969 CRAMP1Q96RY5 1269 aa6.48□□□□□ -1.37
SCARNA20.4-201ENST00000516969 FOXD4L1Q9NU39 408 aa6.48□□□□□ -1.37
SCARNA20.4-201ENST00000516969 GNL3LQ9NVN8 582 aaKnown RBP6.48□□□□□ -1.37
SCARNA20.4-201ENST00000516969 TFCP2L1Q9NZI6 479 aa6.48□□□□□ -1.37
SCARNA20.4-201ENST00000516969 CTNNA3Q9UI47 895 aa6.48□□□□□ -1.37
SCARNA20.4-201ENST00000516969 WWC3Q9ULE0 1092 aa6.48□□□□□ -1.37
SCARNA20.4-201ENST00000516969 ZNF532Q9HCE3 1301 aa6.48□□□□□ -1.37
SCARNA20.4-201ENST00000516969 NPHP1O15259 732 aa6.47□□□□□ -1.37
SCARNA20.4-201ENST00000516969 GPAA1O43292 621 aa6.47□□□□□ -1.37
SCARNA20.4-201ENST00000516969 IDH1O75874 414 aaKnown RBP6.47□□□□□ -1.37
SCARNA20.4-201ENST00000516969 BBOX1O75936 387 aa6.47□□□□□ -1.37
SCARNA20.4-201ENST00000516969 HMGB1P09429 215 aaKnown RBP6.47□□□□□ -1.37
SCARNA20.4-201ENST00000516969 MCM4P33991 863 aa6.47□□□□□ -1.37
SCARNA20.4-201ENST00000516969 GYG1P46976 350 aa6.47□□□□□ -1.37
SCARNA20.4-201ENST00000516969 NUCB2P80303 420 aa6.47□□□□□ -1.37
SCARNA20.4-201ENST00000516969 TOB2Q14106 344 aaPredicted RBP6.47□□□□□ -1.37
SCARNA20.4-201ENST00000516969 ANKRD1Q15327 319 aa6.47□□□□□ -1.37
SCARNA20.4-201ENST00000516969 CAVIN4Q5BKX8 364 aa6.47□□□□□ -1.37
SCARNA20.4-201ENST00000516969 BLOC1S2Q6QNY1 142 aa6.47□□□□□ -1.37
SCARNA20.4-201ENST00000516969 STOX1Q6ZVD7 989 aa6.47□□□□□ -1.37
SCARNA20.4-201ENST00000516969 FBXL16Q8N461 479 aa6.47□□□□□ -1.37
SCARNA20.4-201ENST00000516969 TNPO1Q92973 898 aaKnown RBP6.47□□□□□ -1.37
SCARNA20.4-201ENST00000516969 RBM17Q96I25 401 aaKnown RBP6.47□□□□□ -1.37
SCARNA20.4-201ENST00000516969 CAMKK2Q96RR4 588 aa6.47□□□□□ -1.37
SCARNA20.4-201ENST00000516969 STRBPQ96SI9 672 aaKnown RBP6.47□□□□□ -1.37
SCARNA20.4-201ENST00000516969 SH2B1Q9NRF2 756 aaPredicted RBP6.47□□□□□ -1.37
SCARNA20.4-201ENST00000516969 DENND2AQ9ULE3 1009 aa6.47□□□□□ -1.37
SCARNA20.4-201ENST00000516969 TPCN1Q9ULQ1 816 aa6.47□□□□□ -1.37
SCARNA20.4-201ENST00000516969 LEMD3Q9Y2U8 911 aa6.47□□□□□ -1.37
SCARNA20.4-201ENST00000516969 ZDHHC9Q9Y397 364 aa6.47□□□□□ -1.37
SCARNA20.4-201ENST00000516969 PNPLA7Q6ZV29 1317 aa6.47□□□□□ -1.37
SCARNA20.4-201ENST00000516969 COL1A1P02452 1464 aaPredicted RBP6.47□□□□□ -1.37
SCARNA20.4-201ENST00000516969 A0A0G2JLW4 131 aa6.46□□□□□ -1.38
SCARNA20.4-201ENST00000516969 LRRC37AA6NMS7 1700 aa6.46□□□□□ -1.38
SCARNA20.4-201ENST00000516969 PATL2C9JE40 543 aaKnown RBP6.46□□□□□ -1.38
SCARNA20.4-201ENST00000516969 E7EWF7 191 aa6.46□□□□□ -1.38
SCARNA20.4-201ENST00000516969 IGSF3O75054 1194 aa6.46□□□□□ -1.38
SCARNA20.4-201ENST00000516969 LARGE1O95461 756 aa6.46□□□□□ -1.38
SCARNA20.4-201ENST00000516969 KLRK1P26718 216 aa6.46□□□□□ -1.38
SCARNA20.4-201ENST00000516969 HIBADHP31937 336 aaKnown RBP6.46□□□□□ -1.38
SCARNA20.4-201ENST00000516969 ST3GAL1Q11201 340 aa6.46□□□□□ -1.38
SCARNA20.4-201ENST00000516969 PKP1Q13835 747 aa6.46□□□□□ -1.38
SCARNA20.4-201ENST00000516969 LTBP1Q14766 1721 aa6.46□□□□□ -1.38
SCARNA20.4-201ENST00000516969 ME3Q16798 604 aa6.46□□□□□ -1.38
SCARNA20.4-201ENST00000516969 TTLL5Q6EMB2 1281 aa6.46□□□□□ -1.38
SCARNA20.4-201ENST00000516969 TMED8Q6PL24 325 aaPredicted RBP6.46□□□□□ -1.38
SCARNA20.4-201ENST00000516969 DHX32Q7L7V1 743 aaKnown RBP6.46□□□□□ -1.38
SCARNA20.4-201ENST00000516969 TXNRD3Q86VQ6 643 aa6.46□□□□□ -1.38
SCARNA20.4-201ENST00000516969 MAGEB6Q8N7X4 407 aa6.46□□□□□ -1.38
SCARNA20.4-201ENST00000516969 RPGRQ92834 1020 aaKnown RBP6.46□□□□□ -1.38
SCARNA20.4-201ENST00000516969 LARP6Q9BRS8 491 aaKnown RBP6.46□□□□□ -1.38
SCARNA20.4-201ENST00000516969 BRIP1Q9BX63 1249 aa6.46□□□□□ -1.38
SCARNA20.4-201ENST00000516969 AGXT2Q9BYV1 514 aa6.46□□□□□ -1.38
SCARNA20.4-201ENST00000516969 KIAA1551Q9HCM1 1747 aa6.46□□□□□ -1.38
SCARNA20.4-201ENST00000516969 BAZ2AQ9UIF9 1905 aaKnown RBP6.46□□□□□ -1.38
SCARNA20.4-201ENST00000516969 MYH2Q9UKX2 1941 aa6.46□□□□□ -1.38
SCARNA20.4-201ENST00000516969 ZMYM6O95789 1325 aa6.46□□□□□ -1.38
SCARNA20.4-201ENST00000516969 XDHP47989 1333 aa6.46□□□□□ -1.38
SCARNA20.4-201ENST00000516969 GSG1L2A8MUP6 293 aa6.45□□□□□ -1.38
SCARNA20.4-201ENST00000516969 BRD1O95696 1058 aa6.45□□□□□ -1.38
SCARNA20.4-201ENST00000516969 ATP2B4P23634 1241 aa6.45□□□□□ -1.38
SCARNA20.4-201ENST00000516969 EVCP57679 992 aa6.45□□□□□ -1.38
SCARNA20.4-201ENST00000516969 GPSM2P81274 684 aa6.45□□□□□ -1.38
SCARNA20.4-201ENST00000516969 IMMTQ16891 758 aaKnown RBP6.45□□□□□ -1.38
SCARNA20.4-201ENST00000516969 NOL8Q76FK4 1167 aaKnown RBP6.45□□□□□ -1.38
SCARNA20.4-201ENST00000516969 TMC4Q7Z404 712 aa6.45□□□□□ -1.38
SCARNA20.4-201ENST00000516969 VPS37DQ86XT2 251 aa6.45□□□□□ -1.38
SCARNA20.4-201ENST00000516969 TDRD7Q8NHU6 1098 aaKnown RBP6.45□□□□□ -1.38
SCARNA20.4-201ENST00000516969 ZNF384Q8TF68 577 aa6.45□□□□□ -1.38
SCARNA20.4-201ENST00000516969 NBPF3Q9H094 633 aa6.45□□□□□ -1.38
SCARNA20.4-201ENST00000516969 PODXL2Q9NZ53 605 aa6.45□□□□□ -1.38
SCARNA20.4-201ENST00000516969 ANKIB1Q9P2G1 1089 aa6.45□□□□□ -1.38
SCARNA20.4-201ENST00000516969 LRP2BPQ9P2M1 347 aa6.45□□□□□ -1.38
SCARNA20.4-201ENST00000516969 IQSEC3Q9UPP2 1182 aaPredicted RBP6.45□□□□□ -1.38
SCARNA20.4-201ENST00000516969 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.45□□□□□ -1.38
SCARNA20.4-201ENST00000516969 WDR19Q8NEZ3 1342 aa6.45□□□□□ -1.38
SCARNA20.4-201ENST00000516969 ZNF213O14771 459 aa6.44□□□□□ -1.38
SCARNA20.4-201ENST00000516969 MBD4O95243 580 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms