RNA–Protein interactions for RNA: ENST00000515794.1

AFDN-222, Transcript of afadin, adherens junction formation factor, human

TSL 3

Gene AFDN, Length 746 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AFDN-222	ENST00000515794	TSPYL4	Q9UJ04	414 aa		12.11	□□□□□ -0.47
AFDN-222	ENST00000515794	NTSR2	O95665	410 aa		12.1	□□□□□ -0.47
AFDN-222	ENST00000515794	EIF6	P56537	245 aa	Known RBP	12.1	□□□□□ -0.47
AFDN-222	ENST00000515794	HSP90AB3P	Q58FF7	597 aa		12.1	□□□□□ -0.47
AFDN-222	ENST00000515794	SUSD4	Q5VX71	490 aa		12.1	□□□□□ -0.47
AFDN-222	ENST00000515794	LRP10	Q7Z4F1	713 aa		12.1	□□□□□ -0.47
AFDN-222	ENST00000515794	TNS4	Q8IZW8	715 aa		12.1	□□□□□ -0.47
AFDN-222	ENST00000515794	NGEF	Q8N5V2	710 aa		12.1	□□□□□ -0.47
AFDN-222	ENST00000515794	NLRP3	Q96P20	1036 aa		12.1	□□□□□ -0.47
AFDN-222	ENST00000515794	USB1	Q9BQ65	265 aa	Known RBP	12.1	□□□□□ -0.47
AFDN-222	ENST00000515794	SNED1	Q8TER0	1413 aa		12.1	□□□□□ -0.47
AFDN-222	ENST00000515794	UBN2	Q6ZU65	1347 aa		12.1	□□□□□ -0.47
AFDN-222	ENST00000515794	ZNF541	Q9H0D2	1346 aa		12.1	□□□□□ -0.47
AFDN-222	ENST00000515794	SLX4	Q8IY92	1834 aa		12.09	□□□□□ -0.47
AFDN-222	ENST00000515794	COL11A2	P13942	1736 aa	Predicted RBP	12.09	□□□□□ -0.47
AFDN-222	ENST00000515794	TIAM2	Q8IVF5	1701 aa		12.09	□□□□□ -0.47
AFDN-222	ENST00000515794	CNTNAP1	P78357	1384 aa		12.09	□□□□□ -0.47
AFDN-222	ENST00000515794	ADH1B	P00325	375 aa		12.09	□□□□□ -0.47
AFDN-222	ENST00000515794	MYL6B	P14649	208 aa		12.09	□□□□□ -0.47
AFDN-222	ENST00000515794	RIPK4	P57078	832 aa		12.09	□□□□□ -0.47
AFDN-222	ENST00000515794	UTP14A	Q9BVJ6	771 aa	Known RBP	12.09	□□□□□ -0.47
AFDN-222	ENST00000515794	ABCC12	Q96J65	1359 aa		12.08	□□□□□ -0.48
AFDN-222	ENST00000515794	BBOX1	O75936	387 aa		12.08	□□□□□ -0.48
AFDN-222	ENST00000515794	GPT	P24298	496 aa		12.08	□□□□□ -0.48
AFDN-222	ENST00000515794	RFC5	P40937	340 aa		12.08	□□□□□ -0.48
AFDN-222	ENST00000515794	OLFM4	Q6UX06	510 aa		12.08	□□□□□ -0.48
AFDN-222	ENST00000515794	SUPT20H	Q8NEM7	779 aa		12.08	□□□□□ -0.48
AFDN-222	ENST00000515794	NKX2-3	Q8TAU0	364 aa		12.08	□□□□□ -0.48
AFDN-222	ENST00000515794	THUMPD2	Q9BTF0	503 aa	Known RBP	12.08	□□□□□ -0.48
AFDN-222	ENST00000515794	PPEF1	O14829	653 aa	Predicted RBP	12.07	□□□□□ -0.48
AFDN-222	ENST00000515794	HOXB7	P09629	217 aa		12.07	□□□□□ -0.48
AFDN-222	ENST00000515794	LMOD1	P29536	600 aa	Predicted RBP	12.07	□□□□□ -0.48
AFDN-222	ENST00000515794	TMPO	P42166	694 aa	Known RBP	12.07	□□□□□ -0.48
AFDN-222	ENST00000515794	EAPP	Q56P03	285 aa	Predicted RBP	12.07	□□□□□ -0.48
AFDN-222	ENST00000515794	USP50	Q70EL3	339 aa	Predicted RBP	12.07	□□□□□ -0.48
AFDN-222	ENST00000515794	TMC4	Q7Z404	712 aa		12.07	□□□□□ -0.48
AFDN-222	ENST00000515794	CNTROB	Q8N137	903 aa		12.07	□□□□□ -0.48
AFDN-222	ENST00000515794	LARGE2	Q8N3Y3	721 aa		12.07	□□□□□ -0.48
AFDN-222	ENST00000515794	PRR7	Q8TB68	274 aa		12.07	□□□□□ -0.48
AFDN-222	ENST00000515794	RTFDC1	Q9BY42	306 aa	Predicted RBP	12.07	□□□□□ -0.48
AFDN-222	ENST00000515794	PRDM10	Q9NQV6	1147 aa		12.07	□□□□□ -0.48
AFDN-222	ENST00000515794	ATP6V0A2	Q9Y487	856 aa		12.07	□□□□□ -0.48
AFDN-222	ENST00000515794	DICER1	Q9UPY3	1922 aa	Known RBP	12.07	□□□□□ -0.48
AFDN-222	ENST00000515794	ARFGEF2	Q9Y6D5	1785 aa		12.07	□□□□□ -0.48
AFDN-222	ENST00000515794	RASSF10	A6NK89	507 aa		12.06	□□□□□ -0.48
AFDN-222	ENST00000515794	CFAP99	D6REC4	459 aa		12.06	□□□□□ -0.48
AFDN-222	ENST00000515794	CHL1	O00533	1208 aa		12.06	□□□□□ -0.48
AFDN-222	ENST00000515794	NIM1K	Q8IY84	436 aa		12.06	□□□□□ -0.48
AFDN-222	ENST00000515794	FAM160A2	Q8N612	972 aa	Predicted RBP	12.06	□□□□□ -0.48
AFDN-222	ENST00000515794	DDX21	Q9NR30	783 aa	Known RBP eCLIP	12.06	□□□□□ -0.48
AFDN-222	ENST00000515794	MKRN1	Q9UHC7	482 aa	Known RBP	12.06	□□□□□ -0.48
AFDN-222	ENST00000515794	PCNT	O95613	3336 aa		12.05	□□□□□ -0.48
AFDN-222	ENST00000515794	SCN4A	P35499	1836 aa		12.05	□□□□□ -0.48
AFDN-222	ENST00000515794	EIF2S2	P20042	333 aa	Known RBP	12.05	□□□□□ -0.48
AFDN-222	ENST00000515794	TCIRG1	Q13488	830 aa		12.05	□□□□□ -0.48
AFDN-222	ENST00000515794	MSS51	Q4VC12	460 aa		12.05	□□□□□ -0.48
AFDN-222	ENST00000515794	SP8	Q8IXZ3	490 aa		12.05	□□□□□ -0.48
AFDN-222	ENST00000515794	AIDA	Q96BJ3	306 aa		12.05	□□□□□ -0.48
AFDN-222	ENST00000515794	CDHR2	Q9BYE9	1310 aa		12.05	□□□□□ -0.48
AFDN-222	ENST00000515794	CTCF	P49711	727 aa	Predicted RBP	12.04	□□□□□ -0.48
AFDN-222	ENST00000515794	VEGFB	P49765	207 aa		12.04	□□□□□ -0.48
AFDN-222	ENST00000515794	SCNN1D	P51172	638 aa		12.04	□□□□□ -0.48
AFDN-222	ENST00000515794	DEFB115	Q30KQ5	88 aa		12.04	□□□□□ -0.48
AFDN-222	ENST00000515794	COPS6	Q7L5N1	327 aa		12.04	□□□□□ -0.48
AFDN-222	ENST00000515794	NLRP10	Q86W26	655 aa		12.04	□□□□□ -0.48
AFDN-222	ENST00000515794	ZNRF3	Q9ULT6	936 aa		12.04	□□□□□ -0.48
AFDN-222	ENST00000515794	MYBBP1A	Q9BQG0	1328 aa	Known RBP	12.04	□□□□□ -0.48
AFDN-222	ENST00000515794	PPIP5K2	O43314	1243 aa		12.03	□□□□□ -0.48
AFDN-222	ENST00000515794	MAP2K1	Q02750	393 aa	Predicted RBP	12.03	□□□□□ -0.48
AFDN-222	ENST00000515794	MAP1S	Q66K74	1059 aa	Predicted RBP	12.03	□□□□□ -0.48
AFDN-222	ENST00000515794	RUNDC1	Q96C34	613 aa		12.03	□□□□□ -0.48
AFDN-222	ENST00000515794	SLC6A16	Q9GZN6	736 aa		12.03	□□□□□ -0.48
AFDN-222	ENST00000515794	GTF3C3	Q9Y5Q9	886 aa		12.03	□□□□□ -0.48
AFDN-222	ENST00000515794	GJA3	Q9Y6H8	435 aa		12.03	□□□□□ -0.48
AFDN-222	ENST00000515794	SH3TC1	Q8TE82	1336 aa		12.03	□□□□□ -0.48
AFDN-222	ENST00000515794	LAMB4	A4D0S4	1761 aa		12.02	□□□□□ -0.48
AFDN-222	ENST00000515794	KDM3B	Q7LBC6	1761 aa		12.02	□□□□□ -0.48
AFDN-222	ENST00000515794	KIAA2012	Q0VF49	1180 aa		12.02	□□□□□ -0.49
AFDN-222	ENST00000515794	PROSER3	Q2NL68	480 aa		12.02	□□□□□ -0.49
AFDN-222	ENST00000515794	TMEM259	Q4ZIN3	620 aa		12.02	□□□□□ -0.49
AFDN-222	ENST00000515794	DPP8	Q6V1X1	898 aa	Predicted RBP	12.02	□□□□□ -0.49
AFDN-222	ENST00000515794	DDX46	Q7L014	1031 aa	Known RBP	12.02	□□□□□ -0.49
AFDN-222	ENST00000515794	MPND	Q8N594	471 aa		12.02	□□□□□ -0.49
AFDN-222	ENST00000515794	XAGE3	Q8WTP9	111 aa		12.02	□□□□□ -0.49
AFDN-222	ENST00000515794	TSC1	Q92574	1164 aa		12.02	□□□□□ -0.49
AFDN-222	ENST00000515794	CHMP4A	Q9BY43	222 aa		12.02	□□□□□ -0.49
AFDN-222	ENST00000515794	ADARB2	Q9NS39	739 aa	Known RBP	12.02	□□□□□ -0.49
AFDN-222	ENST00000515794	DBF4	Q9UBU7	674 aa	Predicted RBP	12.02	□□□□□ -0.49
AFDN-222	ENST00000515794	PGAP2	Q9UHJ9	254 aa		12.02	□□□□□ -0.49
AFDN-222	ENST00000515794	TRMT112	Q9UI30	125 aa	Known RBP	12.02	□□□□□ -0.49
AFDN-222	ENST00000515794	ABCC4	O15439	1325 aa		12.02	□□□□□ -0.49
AFDN-222	ENST00000515794	FOXN1	O15353	648 aa		12.01	□□□□□ -0.49
AFDN-222	ENST00000515794	HSP90B1	P14625	803 aa	Known RBP	12.01	□□□□□ -0.49
AFDN-222	ENST00000515794	EPS15	P42566	896 aa		12.01	□□□□□ -0.49
AFDN-222	ENST00000515794	ECE1	P42892	770 aa		12.01	□□□□□ -0.49
AFDN-222	ENST00000515794	TRIM28	Q13263	835 aa	Known RBP	12.01	□□□□□ -0.49
AFDN-222	ENST00000515794	GRAP	Q13588	217 aa		12.01	□□□□□ -0.49
AFDN-222	ENST00000515794	TNIP1	Q15025	636 aa		12.01	□□□□□ -0.49
AFDN-222	ENST00000515794	DESI1	Q6ICB0	168 aa		12.01	□□□□□ -0.49
AFDN-222	ENST00000515794	PLBD2	Q8NHP8	589 aa		12.01	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms