RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, human

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD6-210	ENST00000513582	ABCB6	Q9NP58	842 aa		12.82	□□□□□ -0.36
PDCD6-210	ENST00000513582	ZSCAN12	O43309	604 aa		12.82	□□□□□ -0.36
PDCD6-210	ENST00000513582	KCNA6	P17658	529 aa		12.82	□□□□□ -0.36
PDCD6-210	ENST00000513582	SWT1	Q5T5J6	900 aa	Known RBP	12.82	□□□□□ -0.36
PDCD6-210	ENST00000513582	RUFY2	Q8WXA3	655 aa		12.82	□□□□□ -0.36
PDCD6-210	ENST00000513582	DDX17	Q92841	729 aa	Known RBP	12.82	□□□□□ -0.36
PDCD6-210	ENST00000513582	CHMP4BP1	P59074	171 aa		12.81	□□□□□ -0.36
PDCD6-210	ENST00000513582	FANCC	Q00597	558 aa		12.81	□□□□□ -0.36
PDCD6-210	ENST00000513582	CABLES1	Q8TDN4	633 aa		12.81	□□□□□ -0.36
PDCD6-210	ENST00000513582	PNKP	Q96T60	521 aa		12.81	□□□□□ -0.36
PDCD6-210	ENST00000513582	MPHOSPH8	Q99549	860 aa		12.81	□□□□□ -0.36
PDCD6-210	ENST00000513582	DESI2	Q9BSY9	194 aa		12.81	□□□□□ -0.36
PDCD6-210	ENST00000513582	ATP5J2-PTCD1	G3V325	749 aa		12.81	□□□□□ -0.36
PDCD6-210	ENST00000513582	CHL1	O00533	1208 aa		12.81	□□□□□ -0.36
PDCD6-210	ENST00000513582	PTCD1	O75127	700 aa	Known RBP	12.81	□□□□□ -0.36
PDCD6-210	ENST00000513582	FAM160A1	Q05DH4	1040 aa		12.81	□□□□□ -0.36
PDCD6-210	ENST00000513582	BEND6	Q5SZJ8	279 aa	Predicted RBP	12.81	□□□□□ -0.36
PDCD6-210	ENST00000513582	DPF2	Q92785	391 aa		12.81	□□□□□ -0.36
PDCD6-210	ENST00000513582	CEP89	Q96ST8	783 aa		12.81	□□□□□ -0.36
PDCD6-210	ENST00000513582	PTPRM	P28827	1452 aa		12.81	□□□□□ -0.36
PDCD6-210	ENST00000513582	SOS1	Q07889	1333 aa	Predicted RBP	12.8	□□□□□ -0.36
PDCD6-210	ENST00000513582		A0A087WUV0	522 aa	Predicted RBP	12.8	□□□□□ -0.36
PDCD6-210	ENST00000513582	WDHD1	O75717	1129 aa	Predicted RBP	12.8	□□□□□ -0.36
PDCD6-210	ENST00000513582	BRD3	Q15059	726 aa		12.8	□□□□□ -0.36
PDCD6-210	ENST00000513582	EDC3	Q96F86	508 aa	Known RBP	12.8	□□□□□ -0.36
PDCD6-210	ENST00000513582	USP28	Q96RU2	1077 aa		12.8	□□□□□ -0.36
PDCD6-210	ENST00000513582	TM6SF1	Q9BZW5	370 aa		12.8	□□□□□ -0.36
PDCD6-210	ENST00000513582	KAT6B	Q8WYB5	2073 aa		12.8	□□□□□ -0.36
PDCD6-210	ENST00000513582	TFRC	P02786	760 aa	Known RBP	12.8	□□□□□ -0.36
PDCD6-210	ENST00000513582	PPP2R5A	Q15172	486 aa		12.8	□□□□□ -0.36
PDCD6-210	ENST00000513582	CHRNA2	Q15822	529 aa		12.8	□□□□□ -0.36
PDCD6-210	ENST00000513582	FAM227B	Q96M60	508 aa		12.8	□□□□□ -0.36
PDCD6-210	ENST00000513582	SCP2	P22307	547 aa		12.8	□□□□□ -0.36
PDCD6-210	ENST00000513582	HNRNPH1	P31943	449 aa	Known RBP	12.8	□□□□□ -0.36
PDCD6-210	ENST00000513582	UBASH3A	P57075	661 aa		12.8	□□□□□ -0.36
PDCD6-210	ENST00000513582	NECTIN1	Q15223	517 aa		12.8	□□□□□ -0.36
PDCD6-210	ENST00000513582	JPH2	Q9BR39	696 aa	Predicted RBP	12.8	□□□□□ -0.36
PDCD6-210	ENST00000513582	RAI14	Q9P0K7	980 aa		12.8	□□□□□ -0.36
PDCD6-210	ENST00000513582	PIK3C2B	O00750	1634 aa		12.8	□□□□□ -0.36
PDCD6-210	ENST00000513582	DLG5	Q8TDM6	1919 aa		12.8	□□□□□ -0.36
PDCD6-210	ENST00000513582	CDK12	Q9NYV4	1490 aa	Predicted RBP	12.79	□□□□□ -0.36
PDCD6-210	ENST00000513582	PPFIA4	O75335	1185 aa		12.79	□□□□□ -0.36
PDCD6-210	ENST00000513582	RPS6KA5	O75582	802 aa		12.79	□□□□□ -0.36
PDCD6-210	ENST00000513582	KCNJ6	P48051	423 aa		12.79	□□□□□ -0.36
PDCD6-210	ENST00000513582	TOGARAM2	Q6ZUX3	1019 aa		12.79	□□□□□ -0.36
PDCD6-210	ENST00000513582	CLIC6	Q96NY7	704 aa		12.79	□□□□□ -0.36
PDCD6-210	ENST00000513582	AOX1	Q06278	1338 aa		12.79	□□□□□ -0.36
PDCD6-210	ENST00000513582	TMEM232	C9JQI7	657 aa		12.79	□□□□□ -0.36
PDCD6-210	ENST00000513582	SLC27A2	O14975	620 aa		12.79	□□□□□ -0.36
PDCD6-210	ENST00000513582	PSMA5	P28066	241 aa		12.79	□□□□□ -0.36
PDCD6-210	ENST00000513582	TOB2	Q14106	344 aa	Predicted RBP	12.79	□□□□□ -0.36
PDCD6-210	ENST00000513582	ANKRD26	Q9UPS8	1709 aa		12.79	□□□□□ -0.36
PDCD6-210	ENST00000513582	TOP1	P11387	765 aa	Known RBP	12.79	□□□□□ -0.36
PDCD6-210	ENST00000513582	SATB1	Q01826	763 aa		12.79	□□□□□ -0.36
PDCD6-210	ENST00000513582	ANKZF1	Q9H8Y5	726 aa		12.79	□□□□□ -0.36
PDCD6-210	ENST00000513582	CASP8	Q14790	479 aa		12.78	□□□□□ -0.36
PDCD6-210	ENST00000513582	RPAIN	Q86UA6	219 aa		12.78	□□□□□ -0.36
PDCD6-210	ENST00000513582	LZTFL1	Q9NQ48	299 aa		12.78	□□□□□ -0.36
PDCD6-210	ENST00000513582	MAP3K2	Q9Y2U5	619 aa		12.78	□□□□□ -0.36
PDCD6-210	ENST00000513582	ERLIN1	O75477	346 aa		12.78	□□□□□ -0.36
PDCD6-210	ENST00000513582	CCT5	P48643	541 aa		12.78	□□□□□ -0.36
PDCD6-210	ENST00000513582	MED4	Q9NPJ6	270 aa		12.78	□□□□□ -0.36
PDCD6-210	ENST00000513582	DIP2C	Q9Y2E4	1556 aa		12.78	□□□□□ -0.36
PDCD6-210	ENST00000513582	NEXN	Q0ZGT2	675 aa		12.78	□□□□□ -0.36
PDCD6-210	ENST00000513582	SF3A1	Q15459	793 aa	Known RBP	12.78	□□□□□ -0.36
PDCD6-210	ENST00000513582	ENGASE	Q8NFI3	743 aa		12.78	□□□□□ -0.36
PDCD6-210	ENST00000513582	PRAMEF22	A3QJZ6	481 aa		12.77	□□□□□ -0.36
PDCD6-210	ENST00000513582	EXOC5	O00471	708 aa		12.77	□□□□□ -0.36
PDCD6-210	ENST00000513582	KIF1C	O43896	1103 aa	Known RBP	12.77	□□□□□ -0.36
PDCD6-210	ENST00000513582	ECM2	O94769	699 aa	Predicted RBP	12.77	□□□□□ -0.36
PDCD6-210	ENST00000513582	CP	P00450	1065 aa		12.77	□□□□□ -0.36
PDCD6-210	ENST00000513582	NDUFA8	P51970	172 aa		12.77	□□□□□ -0.36
PDCD6-210	ENST00000513582	ANKRD1	Q15327	319 aa		12.77	□□□□□ -0.36
PDCD6-210	ENST00000513582	KIAA1468	Q9P260	1216 aa		12.77	□□□□□ -0.36
PDCD6-210	ENST00000513582	SIGLEC1	Q9BZZ2	1709 aa		12.77	□□□□□ -0.36
PDCD6-210	ENST00000513582	CD163L1	Q9NR16	1453 aa		12.77	□□□□□ -0.37
PDCD6-210	ENST00000513582	RNF40	O75150	1001 aa		12.77	□□□□□ -0.37
PDCD6-210	ENST00000513582	RPS6KB1	P23443	525 aa		12.77	□□□□□ -0.37
PDCD6-210	ENST00000513582	EIF5	P55010	431 aa	Known RBP	12.77	□□□□□ -0.37
PDCD6-210	ENST00000513582	ADK	P55263	362 aa	Known RBP	12.77	□□□□□ -0.37
PDCD6-210	ENST00000513582	CHST3	Q7LGC8	479 aa		12.77	□□□□□ -0.37
PDCD6-210	ENST00000513582	GDAP1L1	Q96MZ0	367 aa		12.77	□□□□□ -0.37
PDCD6-210	ENST00000513582	L1RE1	Q9UN81	338 aa		12.77	□□□□□ -0.37
PDCD6-210	ENST00000513582	CCDC196	A0A1B0GTZ2	297 aa		12.76	□□□□□ -0.37
PDCD6-210	ENST00000513582	VSNL1	P62760	191 aa		12.76	□□□□□ -0.37
PDCD6-210	ENST00000513582	MTX1	Q13505	466 aa		12.76	□□□□□ -0.37
PDCD6-210	ENST00000513582	KCNV1	Q6PIU1	500 aa		12.76	□□□□□ -0.37
PDCD6-210	ENST00000513582	GIMAP7	Q8NHV1	300 aa		12.76	□□□□□ -0.37
PDCD6-210	ENST00000513582	SETD1B	Q9UPS6	1966 aa	Known RBP	12.76	□□□□□ -0.37
PDCD6-210	ENST00000513582	FAM71B	Q8TC56	605 aa		12.76	□□□□□ -0.37
PDCD6-210	ENST00000513582	AFAP1L1	Q8TED9	768 aa		12.76	□□□□□ -0.37
PDCD6-210	ENST00000513582	RIN2	Q8WYP3	895 aa	Predicted RBP	12.76	□□□□□ -0.37
PDCD6-210	ENST00000513582	KIFC2	Q96AC6	838 aa		12.76	□□□□□ -0.37
PDCD6-210	ENST00000513582	BAG1	Q99933	345 aa	Predicted RBP	12.76	□□□□□ -0.37
PDCD6-210	ENST00000513582	USP44	Q9H0E7	712 aa		12.76	□□□□□ -0.37
PDCD6-210	ENST00000513582	RCOR1	Q9UKL0	485 aa		12.76	□□□□□ -0.37
PDCD6-210	ENST00000513582	CPSF1	Q10570	1443 aa	Known RBP	12.76	□□□□□ -0.37
PDCD6-210	ENST00000513582	CDC42BPG	Q6DT37	1551 aa		12.76	□□□□□ -0.37
PDCD6-210	ENST00000513582	ATP7B	P35670	1465 aa		12.76	□□□□□ -0.37
PDCD6-210	ENST00000513582	LRRIQ3	A6PVS8	624 aa	Predicted RBP	12.76	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 65 ms