RNA–Protein interactions for RNA: ENST00000513222.1

CCHCR1-230, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 511 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-230ENST00000513222 CDCA5Q96FF9 252 aa24.4■■□□□ 1.5
CCHCR1-230ENST00000513222 HDAC9Q9UKV0 1011 aa24.4■■□□□ 1.5
CCHCR1-230ENST00000513222 PAPPA2Q9BXP8 1791 aa24.39■■□□□ 1.5
CCHCR1-230ENST00000513222 HIBADHP31937 336 aaKnown RBP24.39■■□□□ 1.49
CCHCR1-230ENST00000513222 KIAA0825Q8IV33 1275 aa24.39■■□□□ 1.49
CCHCR1-230ENST00000513222 ZNF408Q9H9D4 720 aa24.39■■□□□ 1.49
CCHCR1-230ENST00000513222 UBTFL1P0CB47 393 aaPredicted RBP24.38■■□□□ 1.49
CCHCR1-230ENST00000513222 FGFR2P21802 821 aa24.38■■□□□ 1.49
CCHCR1-230ENST00000513222 CTCFP49711 727 aaPredicted RBP24.38■■□□□ 1.49
CCHCR1-230ENST00000513222 ZBTB22O15209 634 aa24.37■■□□□ 1.49
CCHCR1-230ENST00000513222 HUNKP57058 714 aa24.37■■□□□ 1.49
CCHCR1-230ENST00000513222 FBXW7Q969H0 707 aa24.37■■□□□ 1.49
CCHCR1-230ENST00000513222 FAM155AB1AL88 458 aaPredicted RBP24.36■■□□□ 1.49
CCHCR1-230ENST00000513222 EYA2O00167 538 aa24.36■■□□□ 1.49
CCHCR1-230ENST00000513222 IPO8O15397 1037 aaKnown RBP24.36■■□□□ 1.49
CCHCR1-230ENST00000513222 CIAO1O76071 339 aa24.36■■□□□ 1.49
CCHCR1-230ENST00000513222 GYG1P46976 350 aa24.36■■□□□ 1.49
CCHCR1-230ENST00000513222 RGMBQ6NW40 437 aa24.36■■□□□ 1.49
CCHCR1-230ENST00000513222 ATG9AQ7Z3C6 839 aa24.36■■□□□ 1.49
CCHCR1-230ENST00000513222 KLHDC4Q8TBB5 520 aa24.36■■□□□ 1.49
CCHCR1-230ENST00000513222 AIDAQ96BJ3 306 aa24.36■■□□□ 1.49
CCHCR1-230ENST00000513222 COL1A1P02452 1464 aaPredicted RBP24.36■■□□□ 1.49
CCHCR1-230ENST00000513222 NOGQ13253 232 aa24.35■■□□□ 1.49
CCHCR1-230ENST00000513222 METTL24Q5JXM2 366 aa24.35■■□□□ 1.49
CCHCR1-230ENST00000513222 CCDC102AQ96A19 550 aa24.35■■□□□ 1.49
CCHCR1-230ENST00000513222 MTX1Q13505 466 aa24.34■■□□□ 1.49
CCHCR1-230ENST00000513222 ATF7IPQ6VMQ6 1270 aa24.34■■□□□ 1.49
CCHCR1-230ENST00000513222 APOBEC3FQ8IUX4 373 aaKnown RBP24.34■■□□□ 1.49
CCHCR1-230ENST00000513222 AOC2O75106 756 aa24.33■■□□□ 1.49
CCHCR1-230ENST00000513222 TRIM27P14373 513 aa24.33■■□□□ 1.49
CCHCR1-230ENST00000513222 HNRNPUQ00839 825 aaKnown RBP eCLIP24.33■■□□□ 1.49
CCHCR1-230ENST00000513222 MEIS3Q99687 375 aa24.33■■□□□ 1.49
CCHCR1-230ENST00000513222 MYH13Q9UKX3 1938 aa24.33■■□□□ 1.49
CCHCR1-230ENST00000513222 CA12O43570 354 aa24.32■■□□□ 1.48
CCHCR1-230ENST00000513222 BCAR3O75815 825 aa24.32■■□□□ 1.48
CCHCR1-230ENST00000513222 GNAI3P08754 354 aa24.32■■□□□ 1.48
CCHCR1-230ENST00000513222 HSPA8P11142 646 aaKnown RBP24.32■■□□□ 1.48
CCHCR1-230ENST00000513222 PUM3Q15397 648 aaKnown RBP24.32■■□□□ 1.48
CCHCR1-230ENST00000513222 DLGAP5Q15398 846 aa24.32■■□□□ 1.48
CCHCR1-230ENST00000513222 COPRSQ9NQ92 184 aa24.32■■□□□ 1.48
CCHCR1-230ENST00000513222 SERPINA10Q9UK55 444 aa24.32■■□□□ 1.48
CCHCR1-230ENST00000513222 ZBED9Q6R2W3 1325 aa24.32■■□□□ 1.48
CCHCR1-230ENST00000513222 SPDYE2BA6NHP3 402 aa24.31■■□□□ 1.48
CCHCR1-230ENST00000513222 SPDYE6P0CI01 402 aa24.31■■□□□ 1.48
CCHCR1-230ENST00000513222 CAVIN4Q5BKX8 364 aa24.31■■□□□ 1.48
CCHCR1-230ENST00000513222 MFSD14BQ5SR56 506 aa24.31■■□□□ 1.48
CCHCR1-230ENST00000513222 PAXIP1Q6ZW49 1069 aaPredicted RBP24.31■■□□□ 1.48
CCHCR1-230ENST00000513222 MRIQ9BWK5 157 aa24.31■■□□□ 1.48
CCHCR1-230ENST00000513222 LRRFIP2Q9Y608 721 aaKnown RBP24.31■■□□□ 1.48
CCHCR1-230ENST00000513222 AKAP11Q9UKA4 1901 aa24.3■■□□□ 1.48
CCHCR1-230ENST00000513222 HDLBPQ00341 1268 aaKnown RBP24.3■■□□□ 1.48
CCHCR1-230ENST00000513222 LPIN2Q92539 896 aa24.3■■□□□ 1.48
CCHCR1-230ENST00000513222 PRMT6Q96LA8 375 aaPredicted RBP24.3■■□□□ 1.48
CCHCR1-230ENST00000513222 PPP2R3BQ9Y5P8 575 aa24.3■■□□□ 1.48
CCHCR1-230ENST00000513222 SLC10A3P09131 477 aa24.29■■□□□ 1.48
CCHCR1-230ENST00000513222 CFAP100Q494V2 611 aa24.29■■□□□ 1.48
CCHCR1-230ENST00000513222 TBC1D22AQ8WUA7 517 aa24.29■■□□□ 1.48
CCHCR1-230ENST00000513222 SUGT1Q9Y2Z0 365 aa24.29■■□□□ 1.48
CCHCR1-230ENST00000513222 LAMB1P07942 1786 aa24.29■■□□□ 1.48
CCHCR1-230ENST00000513222 IFIT1P09914 478 aaKnown RBP24.28■■□□□ 1.48
CCHCR1-230ENST00000513222 LBX1P52954 281 aa24.28■■□□□ 1.48
CCHCR1-230ENST00000513222 IL15P40933 162 aaPredicted RBP24.27■■□□□ 1.48
CCHCR1-230ENST00000513222 BCAMP50895 628 aa24.27■■□□□ 1.48
CCHCR1-230ENST00000513222 ZNF157P51786 506 aaPredicted RBP24.27■■□□□ 1.48
CCHCR1-230ENST00000513222 ZIC5Q96T25 663 aa24.27■■□□□ 1.48
CCHCR1-230ENST00000513222 BEGAINQ9BUH8 593 aa24.27■■□□□ 1.48
CCHCR1-230ENST00000513222 DEFB129Q9H1M3 183 aa24.27■■□□□ 1.48
CCHCR1-230ENST00000513222 SCAF8Q9UPN6 1271 aaKnown RBP24.27■■□□□ 1.48
CCHCR1-230ENST00000513222 VPS37DQ86XT2 251 aa24.26■■□□□ 1.47
CCHCR1-230ENST00000513222 REM2Q8IYK8 340 aaPredicted RBP24.26■■□□□ 1.47
CCHCR1-230ENST00000513222 TNS4Q8IZW8 715 aa24.26■■□□□ 1.47
CCHCR1-230ENST00000513222 PCDHAC2Q9Y5I4 1007 aa24.26■■□□□ 1.47
CCHCR1-230ENST00000513222 MYO1BO43795 1136 aa24.25■■□□□ 1.47
CCHCR1-230ENST00000513222 NF2P35240 595 aa24.25■■□□□ 1.47
CCHCR1-230ENST00000513222 GRM1Q13255 1194 aa24.25■■□□□ 1.47
CCHCR1-230ENST00000513222 MAP3K11Q16584 847 aa24.25■■□□□ 1.47
CCHCR1-230ENST00000513222 LDLRAD1Q5T700 205 aa24.25■■□□□ 1.47
CCHCR1-230ENST00000513222 PRAMEF18Q5VWM3 479 aa24.25■■□□□ 1.47
CCHCR1-230ENST00000513222 TTF2Q9UNY4 1162 aaKnown RBP24.25■■□□□ 1.47
CCHCR1-230ENST00000513222 JAG2Q9Y219 1238 aa24.25■■□□□ 1.47
CCHCR1-230ENST00000513222 UNCXA6NJT0 531 aa24.24■■□□□ 1.47
CCHCR1-230ENST00000513222 SLC5A1P13866 664 aa24.24■■□□□ 1.47
CCHCR1-230ENST00000513222 ZKSCAN2Q63HK3 967 aa24.24■■□□□ 1.47
CCHCR1-230ENST00000513222 RASAL3Q86YV0 1011 aa24.24■■□□□ 1.47
CCHCR1-230ENST00000513222 CEP126Q9P2H0 1117 aa24.24■■□□□ 1.47
CCHCR1-230ENST00000513222 TNNQ9UQP3 1299 aa24.24■■□□□ 1.47
CCHCR1-230ENST00000513222 AOX1Q06278 1338 aa24.24■■□□□ 1.47
CCHCR1-230ENST00000513222 F8W031 263 aaPredicted RBP24.23■■□□□ 1.47
CCHCR1-230ENST00000513222 GRIK5Q16478 980 aa24.23■■□□□ 1.47
CCHCR1-230ENST00000513222 SPDYE2Q495Y8 402 aa24.23■■□□□ 1.47
CCHCR1-230ENST00000513222 SAGE1Q9NXZ1 904 aa24.23■■□□□ 1.47
CCHCR1-230ENST00000513222 SSC5DA1L4H1 1573 aa24.22■■□□□ 1.47
CCHCR1-230ENST00000513222 KIF23Q02241 960 aaPredicted RBP24.22■■□□□ 1.47
CCHCR1-230ENST00000513222 DZIP1LQ8IYY4 767 aaKnown RBP24.22■■□□□ 1.47
CCHCR1-230ENST00000513222 FRAT1Q92837 279 aaPredicted RBP24.22■■□□□ 1.47
CCHCR1-230ENST00000513222 UBE2Q2LH0YL09 131 aa24.21■■□□□ 1.47
CCHCR1-230ENST00000513222 GNAI2P04899 355 aa24.21■■□□□ 1.47
CCHCR1-230ENST00000513222 CRKP46108 304 aa24.21■■□□□ 1.47
CCHCR1-230ENST00000513222 ATP2B3Q16720 1220 aa24.21■■□□□ 1.47
CCHCR1-230ENST00000513222 MOB2Q70IA6 237 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms