RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 EAPPQ56P03 285 aaPredicted RBP6.56□□□□□ -1.36
USP38-203ENST00000511739 RASAL2Q9UJF2 1139 aa6.56□□□□□ -1.36
USP38-203ENST00000511739 HECW2Q9P2P5 1572 aa6.56□□□□□ -1.36
USP38-203ENST00000511739 SMARCA5O60264 1052 aaPredicted RBP6.55□□□□□ -1.36
USP38-203ENST00000511739 STAT6P42226 847 aa6.55□□□□□ -1.36
USP38-203ENST00000511739 CEBPAP49715 358 aaPredicted RBP6.55□□□□□ -1.36
USP38-203ENST00000511739 HDAC1Q13547 482 aaPredicted RBP6.55□□□□□ -1.36
USP38-203ENST00000511739 MAK16Q9BXY0 300 aaKnown RBP6.55□□□□□ -1.36
USP38-203ENST00000511739 TMX1Q9H3N1 280 aa6.55□□□□□ -1.36
USP38-203ENST00000511739 NOP56O00567 594 aaKnown RBP6.55□□□□□ -1.36
USP38-203ENST00000511739 CCDC6Q16204 474 aa6.55□□□□□ -1.36
USP38-203ENST00000511739 TMTC2Q8N394 836 aa6.55□□□□□ -1.36
USP38-203ENST00000511739 KIF18AQ8NI77 898 aa6.55□□□□□ -1.36
USP38-203ENST00000511739 THUMPD2Q9BTF0 503 aaKnown RBP6.55□□□□□ -1.36
USP38-203ENST00000511739 CDC42BPBQ9Y5S2 1711 aa6.55□□□□□ -1.36
USP38-203ENST00000511739 PPIP5K1Q6PFW1 1433 aa6.55□□□□□ -1.36
USP38-203ENST00000511739 SOS1Q07889 1333 aaPredicted RBP6.55□□□□□ -1.36
USP38-203ENST00000511739 BIN1O00499 593 aa6.55□□□□□ -1.36
USP38-203ENST00000511739 HARSP12081 509 aaKnown RBP6.55□□□□□ -1.36
USP38-203ENST00000511739 RAB11FIP4Q86YS3 637 aa6.55□□□□□ -1.36
USP38-203ENST00000511739 ANKRD24Q8TF21 1146 aa6.55□□□□□ -1.36
USP38-203ENST00000511739 EVI5LQ96CN4 794 aa6.55□□□□□ -1.36
USP38-203ENST00000511739 SMC6Q96SB8 1091 aa6.55□□□□□ -1.36
USP38-203ENST00000511739 TMEM110-MUSTN1A8MSY1 372 aa6.55□□□□□ -1.36
USP38-203ENST00000511739 N4BP3O15049 544 aa6.55□□□□□ -1.36
USP38-203ENST00000511739 C20orf194Q5TEA3 1177 aa6.55□□□□□ -1.36
USP38-203ENST00000511739 HOOK2Q96ED9 719 aa6.55□□□□□ -1.36
USP38-203ENST00000511739 SELENOOQ9BVL4 669 aa6.55□□□□□ -1.36
USP38-203ENST00000511739 CCDC102BQ68D86 513 aa6.55□□□□□ -1.36
USP38-203ENST00000511739 KIFC2Q96AC6 838 aa6.55□□□□□ -1.36
USP38-203ENST00000511739 CCDC114Q96M63 670 aa6.55□□□□□ -1.36
USP38-203ENST00000511739 F6X3S4 739 aa6.54□□□□□ -1.36
USP38-203ENST00000511739 BMP15O95972 392 aa6.54□□□□□ -1.36
USP38-203ENST00000511739 PLA2R1Q13018 1463 aa6.54□□□□□ -1.36
USP38-203ENST00000511739 ZMYM3Q14202 1370 aa6.54□□□□□ -1.36
USP38-203ENST00000511739 LAMC1P11047 1609 aa6.54□□□□□ -1.36
USP38-203ENST00000511739 ERICH4A6NGS2 130 aa6.54□□□□□ -1.36
USP38-203ENST00000511739 DAAM2Q86T65 1068 aa6.54□□□□□ -1.36
USP38-203ENST00000511739 RRP36Q96EU6 259 aaKnown RBP6.54□□□□□ -1.36
USP38-203ENST00000511739 GTPBP4Q9BZE4 634 aaKnown RBP6.54□□□□□ -1.36
USP38-203ENST00000511739 A0A1W2PP64 1363 aa6.54□□□□□ -1.36
USP38-203ENST00000511739 PLEKHH1Q9ULM0 1364 aa6.54□□□□□ -1.36
USP38-203ENST00000511739 EDC4Q6P2E9 1401 aaKnown RBP6.54□□□□□ -1.36
USP38-203ENST00000511739 DAPK3O43293 454 aa6.54□□□□□ -1.36
USP38-203ENST00000511739 ATP2A2P16615 1042 aaKnown RBP6.54□□□□□ -1.36
USP38-203ENST00000511739 RRAGBQ5VZM2 374 aa6.54□□□□□ -1.36
USP38-203ENST00000511739 GTF3C6Q969F1 213 aa6.54□□□□□ -1.36
USP38-203ENST00000511739 CNNM2Q9H8M5 875 aa6.54□□□□□ -1.36
USP38-203ENST00000511739 EMILIN1Q9Y6C2 1016 aa6.54□□□□□ -1.36
USP38-203ENST00000511739 ARHGAP31Q2M1Z3 1444 aa6.54□□□□□ -1.36
USP38-203ENST00000511739 GIPC1O14908 333 aa6.54□□□□□ -1.36
USP38-203ENST00000511739 TRIM27P14373 513 aa6.54□□□□□ -1.36
USP38-203ENST00000511739 MCM5P33992 734 aa6.54□□□□□ -1.36
USP38-203ENST00000511739 ASIC1P78348 528 aa6.54□□□□□ -1.36
USP38-203ENST00000511739 PRKG1Q13976 671 aa6.54□□□□□ -1.36
USP38-203ENST00000511739 ARHGEF6Q15052 776 aa6.54□□□□□ -1.36
USP38-203ENST00000511739 KRT79Q5XKE5 535 aa6.54□□□□□ -1.36
USP38-203ENST00000511739 CTR9Q6PD62 1173 aa6.54□□□□□ -1.36
USP38-203ENST00000511739 EHBP1Q8NDI1 1231 aa6.54□□□□□ -1.36
USP38-203ENST00000511739 RBM17Q96I25 401 aaKnown RBP6.54□□□□□ -1.36
USP38-203ENST00000511739 FNBP1Q96RU3 617 aa6.54□□□□□ -1.36
USP38-203ENST00000511739 HAUS2Q9NVX0 235 aa6.54□□□□□ -1.36
USP38-203ENST00000511739 RBM27Q9P2N5 1060 aaKnown RBP6.54□□□□□ -1.36
USP38-203ENST00000511739 TBX22Q9Y458 520 aa6.54□□□□□ -1.36
USP38-203ENST00000511739 ACEP12821 1306 aa6.54□□□□□ -1.36
USP38-203ENST00000511739 TRPM1Q7Z4N2 1603 aa6.54□□□□□ -1.36
USP38-203ENST00000511739 EFCAB6Q5THR3 1501 aa6.54□□□□□ -1.36
USP38-203ENST00000511739 CFAP157Q5JU67 520 aa6.54□□□□□ -1.36
USP38-203ENST00000511739 NSMCE1Q8WV22 266 aa6.54□□□□□ -1.36
USP38-203ENST00000511739 ECHDC1Q9NTX5 307 aa6.54□□□□□ -1.36
USP38-203ENST00000511739 STX10O60499 249 aa6.53□□□□□ -1.36
USP38-203ENST00000511739 SATB1Q01826 763 aa6.53□□□□□ -1.36
USP38-203ENST00000511739 BIRC3Q13489 604 aa6.53□□□□□ -1.36
USP38-203ENST00000511739 RTN1Q16799 776 aa6.53□□□□□ -1.36
USP38-203ENST00000511739 ANKRD13DQ6ZTN6 518 aa6.53□□□□□ -1.36
USP38-203ENST00000511739 GABPB2Q8TAK5 448 aaPredicted RBP6.53□□□□□ -1.36
USP38-203ENST00000511739 SMCR8Q8TEV9 937 aaPredicted RBP6.53□□□□□ -1.36
USP38-203ENST00000511739 AFG3L2Q9Y4W6 797 aa6.53□□□□□ -1.36
USP38-203ENST00000511739 POTEB2H3BUK9 544 aa6.53□□□□□ -1.36
USP38-203ENST00000511739 ZBTB43O43298 467 aa6.53□□□□□ -1.36
USP38-203ENST00000511739 RAB3GAP1Q15042 981 aa6.53□□□□□ -1.36
USP38-203ENST00000511739 TRAPPC3LQ5T215 181 aa6.53□□□□□ -1.36
USP38-203ENST00000511739 HACE1Q8IYU2 909 aa6.53□□□□□ -1.36
USP38-203ENST00000511739 JARID2Q92833 1246 aaPredicted RBP6.53□□□□□ -1.36
USP38-203ENST00000511739 ATP6V0A2Q9Y487 856 aa6.53□□□□□ -1.36
USP38-203ENST00000511739 NPHP3Q7Z494 1330 aa6.53□□□□□ -1.36
USP38-203ENST00000511739 CLASP1Q7Z460 1538 aa6.53□□□□□ -1.36
USP38-203ENST00000511739 FAM200AQ8TCP9 573 aa6.53□□□□□ -1.36
USP38-203ENST00000511739 SLC5A4Q9NY91 659 aa6.53□□□□□ -1.36
USP38-203ENST00000511739 PKD2L1Q9P0L9 805 aa6.53□□□□□ -1.36
USP38-203ENST00000511739 LIMCH1Q9UPQ0 1083 aa6.53□□□□□ -1.36
USP38-203ENST00000511739 MAGEB6P1A0A0J9YX57 407 aa6.53□□□□□ -1.36
USP38-203ENST00000511739 CYLC1P35663 651 aaPredicted RBP6.53□□□□□ -1.36
USP38-203ENST00000511739 ARID5AQ03989 594 aa6.53□□□□□ -1.36
USP38-203ENST00000511739 KIF5AQ12840 1032 aa6.53□□□□□ -1.36
USP38-203ENST00000511739 FAM47CQ5HY64 1035 aa6.53□□□□□ -1.36
USP38-203ENST00000511739 ISM2Q6H9L7 571 aa6.53□□□□□ -1.36
USP38-203ENST00000511739 CCDC125Q86Z20 511 aa6.53□□□□□ -1.36
USP38-203ENST00000511739 LMBR1Q8WVP7 490 aa6.53□□□□□ -1.36
USP38-203ENST00000511739 TBC1D31Q96DN5 1066 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms