RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 PUM3Q15397 648 aaKnown RBP13.03□□□□□ -0.32
SH3RF1-203ENST00000508685 MROH5Q6ZUA9 1318 aa13.03□□□□□ -0.32
SH3RF1-203ENST00000508685 ABCC12Q96J65 1359 aa13.03□□□□□ -0.32
SH3RF1-203ENST00000508685 SBF2Q86WG5 1849 aa13.03□□□□□ -0.32
SH3RF1-203ENST00000508685 M0R2C6 588 aa13.03□□□□□ -0.32
SH3RF1-203ENST00000508685 DTNBO60941 627 aa13.03□□□□□ -0.32
SH3RF1-203ENST00000508685 TPM3P06753 285 aa13.03□□□□□ -0.32
SH3RF1-203ENST00000508685 CYP21A2P08686 494 aa13.03□□□□□ -0.32
SH3RF1-203ENST00000508685 PHKA1P46020 1223 aa13.03□□□□□ -0.32
SH3RF1-203ENST00000508685 KIAA2012Q0VF49 1180 aa13.03□□□□□ -0.32
SH3RF1-203ENST00000508685 RNF214Q8ND24 703 aa13.03□□□□□ -0.32
SH3RF1-203ENST00000508685 OSBP2Q969R2 916 aa13.03□□□□□ -0.32
SH3RF1-203ENST00000508685 CHAMP1Q96JM3 812 aa13.03□□□□□ -0.32
SH3RF1-203ENST00000508685 HELLSQ9NRZ9 838 aa13.03□□□□□ -0.32
SH3RF1-203ENST00000508685 TNS1Q9HBL0 1735 aaKnown RBP13.03□□□□□ -0.32
SH3RF1-203ENST00000508685 GOLGB1Q14789 3259 aaKnown RBP13.02□□□□□ -0.32
SH3RF1-203ENST00000508685 RPS6KA4O75676 772 aa13.02□□□□□ -0.33
SH3RF1-203ENST00000508685 FGFR2P21802 821 aa13.02□□□□□ -0.33
SH3RF1-203ENST00000508685 RC3H1Q5TC82 1133 aaKnown RBP13.02□□□□□ -0.33
SH3RF1-203ENST00000508685 CCDC102BQ68D86 513 aa13.02□□□□□ -0.33
SH3RF1-203ENST00000508685 CAMKK2Q96RR4 588 aa13.02□□□□□ -0.33
SH3RF1-203ENST00000508685 HMG20BQ9P0W2 317 aa13.02□□□□□ -0.33
SH3RF1-203ENST00000508685 LY75O60449 1722 aa13.02□□□□□ -0.33
SH3RF1-203ENST00000508685 AKAP11Q9UKA4 1901 aa13.02□□□□□ -0.33
SH3RF1-203ENST00000508685 A0A0G2JLW4 131 aa13.01□□□□□ -0.33
SH3RF1-203ENST00000508685 LPIN2Q92539 896 aa13.01□□□□□ -0.33
SH3RF1-203ENST00000508685 NARFQ9UHQ1 456 aa13.01□□□□□ -0.33
SH3RF1-203ENST00000508685 CNPY2Q9Y2B0 182 aa13.01□□□□□ -0.33
SH3RF1-203ENST00000508685 U3KPZ7 1027 aaPredicted RBP13.01□□□□□ -0.33
SH3RF1-203ENST00000508685 RTL9Q8NET4 1388 aa13.01□□□□□ -0.33
SH3RF1-203ENST00000508685 HSPD1P10809 573 aaKnown RBP13.01□□□□□ -0.33
SH3RF1-203ENST00000508685 GJB2P29033 226 aa13.01□□□□□ -0.33
SH3RF1-203ENST00000508685 IGHMBP2P38935 993 aaKnown RBP13.01□□□□□ -0.33
SH3RF1-203ENST00000508685 EZH2Q15910 746 aaKnown RBP13.01□□□□□ -0.33
SH3RF1-203ENST00000508685 WASHC4Q2M389 1173 aa13.01□□□□□ -0.33
SH3RF1-203ENST00000508685 TSGA10IPQ3SY00 556 aa13.01□□□□□ -0.33
SH3RF1-203ENST00000508685 BLOC1S2Q6QNY1 142 aa13.01□□□□□ -0.33
SH3RF1-203ENST00000508685 SASS6Q6UVJ0 657 aa13.01□□□□□ -0.33
SH3RF1-203ENST00000508685 RTCBQ9Y3I0 505 aaKnown RBP13.01□□□□□ -0.33
SH3RF1-203ENST00000508685 R3HCC1Q9Y3T6 440 aaKnown RBP13.01□□□□□ -0.33
SH3RF1-203ENST00000508685 TAF1LQ8IZX4 1826 aa13□□□□□ -0.33
SH3RF1-203ENST00000508685 DYNC1I1O14576 645 aa13□□□□□ -0.33
SH3RF1-203ENST00000508685 PLSCR1O15162 318 aa13□□□□□ -0.33
SH3RF1-203ENST00000508685 ZPR1O75312 459 aa13□□□□□ -0.33
SH3RF1-203ENST00000508685 HSP90B1P14625 803 aaKnown RBP13□□□□□ -0.33
SH3RF1-203ENST00000508685 RPS6KB1P23443 525 aa13□□□□□ -0.33
SH3RF1-203ENST00000508685 ARHGEF1Q92888 912 aaKnown RBP13□□□□□ -0.33
SH3RF1-203ENST00000508685 GDPD2Q9HCC8 539 aa13□□□□□ -0.33
SH3RF1-203ENST00000508685 LRRC4BQ9NT99 713 aa13□□□□□ -0.33
SH3RF1-203ENST00000508685 TPCN1Q9ULQ1 816 aa13□□□□□ -0.33
SH3RF1-203ENST00000508685 MTMR6Q9Y217 621 aa13□□□□□ -0.33
SH3RF1-203ENST00000508685 TCHHQ07283 1943 aa13□□□□□ -0.33
SH3RF1-203ENST00000508685 TAF1P21675 1872 aa13□□□□□ -0.33
SH3RF1-203ENST00000508685 ARAP2Q8WZ64 1704 aa13□□□□□ -0.33
SH3RF1-203ENST00000508685 FOXP2O15409 715 aa13□□□□□ -0.33
SH3RF1-203ENST00000508685 GTF2E1P29083 439 aaPredicted RBP13□□□□□ -0.33
SH3RF1-203ENST00000508685 ARID4AP29374 1257 aaPredicted RBP13□□□□□ -0.33
SH3RF1-203ENST00000508685 ST3GAL1Q11201 340 aa13□□□□□ -0.33
SH3RF1-203ENST00000508685 ME3Q16798 604 aa13□□□□□ -0.33
SH3RF1-203ENST00000508685 TICAM2Q86XR7 235 aa13□□□□□ -0.33
SH3RF1-203ENST00000508685 CCDC83Q8IWF9 413 aa13□□□□□ -0.33
SH3RF1-203ENST00000508685 CCDC24Q8N4L8 307 aa13□□□□□ -0.33
SH3RF1-203ENST00000508685 ZNF512BQ96KM6 892 aaPredicted RBP13□□□□□ -0.33
SH3RF1-203ENST00000508685 DSCC1Q9BVC3 393 aa13□□□□□ -0.33
SH3RF1-203ENST00000508685 PUS7LQ9H0K6 701 aaKnown RBP13□□□□□ -0.33
SH3RF1-203ENST00000508685 CASZ1Q86V15 1759 aa12.99□□□□□ -0.33
SH3RF1-203ENST00000508685 C4BP0C0L5 1744 aa12.99□□□□□ -0.33
SH3RF1-203ENST00000508685 ELP1O95163 1332 aa12.99□□□□□ -0.33
SH3RF1-203ENST00000508685 WTIPA6NIX2 430 aaPredicted RBP12.99□□□□□ -0.33
SH3RF1-203ENST00000508685 CHRNDQ07001 517 aa12.99□□□□□ -0.33
SH3RF1-203ENST00000508685 TOB2Q14106 344 aaPredicted RBP12.99□□□□□ -0.33
SH3RF1-203ENST00000508685 STOX1Q6ZVD7 989 aa12.99□□□□□ -0.33
SH3RF1-203ENST00000508685 SETDB2Q96T68 719 aa12.99□□□□□ -0.33
SH3RF1-203ENST00000508685 PIH1D3Q9NQM4 214 aaKnown RBP12.99□□□□□ -0.33
SH3RF1-203ENST00000508685 KDM4AO75164 1064 aa12.98□□□□□ -0.33
SH3RF1-203ENST00000508685 SLC5A1P13866 664 aa12.98□□□□□ -0.33
SH3RF1-203ENST00000508685 RASGRF1Q13972 1273 aa12.98□□□□□ -0.33
SH3RF1-203ENST00000508685 KRT32Q14532 448 aa12.98□□□□□ -0.33
SH3RF1-203ENST00000508685 NBPF5PQ86XG9 351 aaPredicted RBP12.98□□□□□ -0.33
SH3RF1-203ENST00000508685 NECAB1Q8N987 351 aa12.98□□□□□ -0.33
SH3RF1-203ENST00000508685 C4AP0C0L4 1744 aa12.98□□□□□ -0.33
SH3RF1-203ENST00000508685 MYO5AQ9Y4I1 1855 aaKnown RBP12.98□□□□□ -0.33
SH3RF1-203ENST00000508685 IDH1O75874 414 aaKnown RBP12.98□□□□□ -0.33
SH3RF1-203ENST00000508685 ZFYP08048 801 aaPredicted RBP12.98□□□□□ -0.33
SH3RF1-203ENST00000508685 KRT85P78386 507 aa12.98□□□□□ -0.33
SH3RF1-203ENST00000508685 HMGN5P82970 282 aaKnown RBP12.98□□□□□ -0.33
SH3RF1-203ENST00000508685 LRRFIP1Q32MZ4 808 aaKnown RBP12.98□□□□□ -0.33
SH3RF1-203ENST00000508685 FOXD4L6Q3SYB3 417 aaPredicted RBP12.98□□□□□ -0.33
SH3RF1-203ENST00000508685 SLC9C2Q5TAH2 1124 aa12.98□□□□□ -0.33
SH3RF1-203ENST00000508685 TTLL5Q6EMB2 1281 aa12.98□□□□□ -0.33
SH3RF1-203ENST00000508685 FOXD4L3Q6VB84 417 aaPredicted RBP12.98□□□□□ -0.33
SH3RF1-203ENST00000508685 APPBP2Q92624 585 aa12.98□□□□□ -0.33
SH3RF1-203ENST00000508685 NEK1Q96PY6 1258 aa12.98□□□□□ -0.33
SH3RF1-203ENST00000508685 CDC5LQ99459 802 aaKnown RBP12.98□□□□□ -0.33
SH3RF1-203ENST00000508685 FIBPO43427 364 aa12.97□□□□□ -0.33
SH3RF1-203ENST00000508685 BCAMP50895 628 aa12.97□□□□□ -0.33
SH3RF1-203ENST00000508685 SF3B3Q15393 1217 aaKnown RBP12.97□□□□□ -0.33
SH3RF1-203ENST00000508685 LARP1BQ659C4 914 aaKnown RBP12.97□□□□□ -0.33
SH3RF1-203ENST00000508685 PIBF1Q8WXW3 757 aa12.97□□□□□ -0.33
SH3RF1-203ENST00000508685 PRIMPOLQ96LW4 560 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms