RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 RIPOR2Q9Y4F9 1068 aa20.47■□□□□ 0.87
LMNA-222ENST00000508500 PCDHAC2Q9Y5I4 1007 aa20.47■□□□□ 0.87
LMNA-222ENST00000508500 DIEXFQ68CQ4 756 aaKnown RBP20.46■□□□□ 0.87
LMNA-222ENST00000508500 MOB2Q70IA6 237 aa20.46■□□□□ 0.87
LMNA-222ENST00000508500 LRRC24Q50LG9 513 aa20.45■□□□□ 0.86
LMNA-222ENST00000508500 MCOLN1Q9GZU1 580 aa20.45■□□□□ 0.86
LMNA-222ENST00000508500 JAG2Q9Y219 1238 aa20.45■□□□□ 0.86
LMNA-222ENST00000508500 ZNF157P51786 506 aaPredicted RBP20.44■□□□□ 0.86
LMNA-222ENST00000508500 ZNF804AQ7Z570 1209 aa20.44■□□□□ 0.86
LMNA-222ENST00000508500 MYH13Q9UKX3 1938 aa20.44■□□□□ 0.86
LMNA-222ENST00000508500 SLC10A3P09131 477 aa20.43■□□□□ 0.86
LMNA-222ENST00000508500 GYG1P46976 350 aa20.43■□□□□ 0.86
LMNA-222ENST00000508500 MMP14P50281 582 aa20.43■□□□□ 0.86
LMNA-222ENST00000508500 KIF23Q02241 960 aaPredicted RBP20.43■□□□□ 0.86
LMNA-222ENST00000508500 UBE4AQ14139 1066 aa20.43■□□□□ 0.86
LMNA-222ENST00000508500 TDRD7Q8NHU6 1098 aaKnown RBP20.43■□□□□ 0.86
LMNA-222ENST00000508500 KLHDC4Q8TBB5 520 aa20.43■□□□□ 0.86
LMNA-222ENST00000508500 FAM84BQ96KN1 310 aaPredicted RBP20.43■□□□□ 0.86
LMNA-222ENST00000508500 SMC4Q9NTJ3 1288 aa20.43■□□□□ 0.86
LMNA-222ENST00000508500 AOX1Q06278 1338 aa20.43■□□□□ 0.86
LMNA-222ENST00000508500 FKBP1AP62942 108 aaKnown RBP20.42■□□□□ 0.86
LMNA-222ENST00000508500 CCDC102AQ96A19 550 aa20.42■□□□□ 0.86
LMNA-222ENST00000508500 SAGE1Q9NXZ1 904 aa20.42■□□□□ 0.86
LMNA-222ENST00000508500 HDAC9Q9UKV0 1011 aa20.42■□□□□ 0.86
LMNA-222ENST00000508500 F8W031 263 aaPredicted RBP20.41■□□□□ 0.86
LMNA-222ENST00000508500 RFX5P48382 616 aaPredicted RBP20.41■□□□□ 0.86
LMNA-222ENST00000508500 FKBP1BP68106 108 aa20.41■□□□□ 0.86
LMNA-222ENST00000508500 RASAL3Q86YV0 1011 aa20.41■□□□□ 0.86
LMNA-222ENST00000508500 VGLL2Q8N8G2 317 aa20.41■□□□□ 0.86
LMNA-222ENST00000508500 MTMR14Q8NCE2 650 aa20.41■□□□□ 0.86
LMNA-222ENST00000508500 FAM205AQ6ZU69 1335 aa20.41■□□□□ 0.86
LMNA-222ENST00000508500 CCDC85CA6NKD9 419 aa20.4■□□□□ 0.86
LMNA-222ENST00000508500 UBE2Q2LH0YL09 131 aa20.4■□□□□ 0.86
LMNA-222ENST00000508500 MROH5Q6ZUA9 1318 aa20.4■□□□□ 0.86
LMNA-222ENST00000508500 NOB1Q9ULX3 412 aaKnown RBP20.4■□□□□ 0.86
LMNA-222ENST00000508500 LAMB1P07942 1786 aa20.39■□□□□ 0.86
LMNA-222ENST00000508500 HIBADHP31937 336 aaKnown RBP20.39■□□□□ 0.85
LMNA-222ENST00000508500 PRMT6Q96LA8 375 aaPredicted RBP20.39■□□□□ 0.85
LMNA-222ENST00000508500 CSRNP1Q96S65 589 aa20.39■□□□□ 0.85
LMNA-222ENST00000508500 CT47B1P0C2W7 299 aaPredicted RBP20.38■□□□□ 0.85
LMNA-222ENST00000508500 DLGAP5Q15398 846 aa20.38■□□□□ 0.85
LMNA-222ENST00000508500 CFAP100Q494V2 611 aa20.38■□□□□ 0.85
LMNA-222ENST00000508500 FBXO33Q7Z6M2 555 aa20.38■□□□□ 0.85
LMNA-222ENST00000508500 APOBEC3FQ8IUX4 373 aaKnown RBP20.38■□□□□ 0.85
LMNA-222ENST00000508500 PDE8BO95263 885 aa20.37■□□□□ 0.85
LMNA-222ENST00000508500 DGKZQ13574 1117 aa20.37■□□□□ 0.85
LMNA-222ENST00000508500 GRIK5Q16478 980 aa20.37■□□□□ 0.85
LMNA-222ENST00000508500 RNF186Q9NXI6 227 aa20.37■□□□□ 0.85
LMNA-222ENST00000508500 FZD1Q9UP38 647 aa20.37■□□□□ 0.85
LMNA-222ENST00000508500 SSC5DA1L4H1 1573 aa20.37■□□□□ 0.85
LMNA-222ENST00000508500 SPDYE2BA6NHP3 402 aa20.36■□□□□ 0.85
LMNA-222ENST00000508500 SPDYE6P0CI01 402 aa20.36■□□□□ 0.85
LMNA-222ENST00000508500 RARSP54136 660 aaKnown RBP20.36■□□□□ 0.85
LMNA-222ENST00000508500 MLLT1Q03111 559 aaPredicted RBP20.36■□□□□ 0.85
LMNA-222ENST00000508500 PTPN12Q05209 780 aaKnown RBP20.36■□□□□ 0.85
LMNA-222ENST00000508500 METTL24Q5JXM2 366 aa20.36■□□□□ 0.85
LMNA-222ENST00000508500 IQSEC3Q9UPP2 1182 aaPredicted RBP20.36■□□□□ 0.85
LMNA-222ENST00000508500 CLRN2A0PK11 232 aa20.35■□□□□ 0.85
LMNA-222ENST00000508500 SLC34A2O95436 690 aa20.35■□□□□ 0.85
LMNA-222ENST00000508500 FGFR2P21802 821 aa20.35■□□□□ 0.85
LMNA-222ENST00000508500 MFSD14BQ5SR56 506 aa20.35■□□□□ 0.85
LMNA-222ENST00000508500 DEFB129Q9H1M3 183 aa20.35■□□□□ 0.85
LMNA-222ENST00000508500 OTOFQ9HC10 1997 aa20.35■□□□□ 0.85
LMNA-222ENST00000508500 COL1A1P02452 1464 aaPredicted RBP20.35■□□□□ 0.85
LMNA-222ENST00000508500 PRKG1Q13976 671 aa20.34■□□□□ 0.85
LMNA-222ENST00000508500 ATG9AQ7Z3C6 839 aa20.34■□□□□ 0.85
LMNA-222ENST00000508500 EYA2O00167 538 aa20.33■□□□□ 0.85
LMNA-222ENST00000508500 BCAMP50895 628 aa20.33■□□□□ 0.85
LMNA-222ENST00000508500 TTLL12Q14166 644 aaPredicted RBP20.33■□□□□ 0.85
LMNA-222ENST00000508500 LDLRAD1Q5T700 205 aa20.33■□□□□ 0.85
LMNA-222ENST00000508500 TTF2Q9UNY4 1162 aaKnown RBP20.33■□□□□ 0.85
LMNA-222ENST00000508500 TRPA1O75762 1119 aa20.32■□□□□ 0.84
LMNA-222ENST00000508500 API5Q9BZZ5 524 aaKnown RBP20.32■□□□□ 0.84
LMNA-222ENST00000508500 UBTFL1P0CB47 393 aaPredicted RBP20.31■□□□□ 0.84
LMNA-222ENST00000508500 NF2P35240 595 aa20.31■□□□□ 0.84
LMNA-222ENST00000508500 MIER1Q8N108 512 aa20.31■□□□□ 0.84
LMNA-222ENST00000508500 MEIS3Q99687 375 aa20.31■□□□□ 0.84
LMNA-222ENST00000508500 TNNQ9UQP3 1299 aa20.31■□□□□ 0.84
LMNA-222ENST00000508500 LRRFIP2Q9Y608 721 aaKnown RBP20.31■□□□□ 0.84
LMNA-222ENST00000508500 RBM5P52756 815 aaKnown RBP eCLIP20.3■□□□□ 0.84
LMNA-222ENST00000508500 MAP3K11Q16584 847 aa20.3■□□□□ 0.84
LMNA-222ENST00000508500 NBPF12Q5TAG4 269 aaPredicted RBP20.3■□□□□ 0.84
LMNA-222ENST00000508500 REM2Q8IYK8 340 aaPredicted RBP20.3■□□□□ 0.84
LMNA-222ENST00000508500 TDRD3Q9H7E2 651 aaKnown RBP20.3■□□□□ 0.84
LMNA-222ENST00000508500 VEZTQ9HBM0 779 aa20.3■□□□□ 0.84
LMNA-222ENST00000508500 SERPINA10Q9UK55 444 aa20.3■□□□□ 0.84
LMNA-222ENST00000508500 ANGEL1Q9UNK9 670 aaKnown RBP20.3■□□□□ 0.84
LMNA-222ENST00000508500 CHAF1AQ13111 956 aaPredicted RBP20.29■□□□□ 0.84
LMNA-222ENST00000508500 PUM3Q15397 648 aaKnown RBP20.29■□□□□ 0.84
LMNA-222ENST00000508500 SPDYE2Q495Y8 402 aa20.29■□□□□ 0.84
LMNA-222ENST00000508500 CAVIN4Q5BKX8 364 aa20.29■□□□□ 0.84
LMNA-222ENST00000508500 ARMC9Q7Z3E5 817 aa20.29■□□□□ 0.84
LMNA-222ENST00000508500 ZNF70Q9UC06 446 aaPredicted RBP20.29■□□□□ 0.84
LMNA-222ENST00000508500 PPP2R3BQ9Y5P8 575 aa20.29■□□□□ 0.84
LMNA-222ENST00000508500 PDE4DIPQ5VU43 2346 aa20.28■□□□□ 0.84
LMNA-222ENST00000508500 KIF16BQ96L93 1317 aa20.28■□□□□ 0.84
LMNA-222ENST00000508500 MYO1BO43795 1136 aa20.28■□□□□ 0.84
LMNA-222ENST00000508500 CRKP46108 304 aa20.28■□□□□ 0.84
LMNA-222ENST00000508500 MKRN3Q13064 507 aaKnown RBP20.28■□□□□ 0.84
LMNA-222ENST00000508500 RASA3Q14644 834 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms