RNA–Protein interactions for RNA: ENST00000508386.1

KDM3B-205, Transcript of lysine demethylase 3B, humanhuman

TSL 4

Gene KDM3B, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-205ENST00000508386 PTPN18Q99952 460 aa7.55□□□□□ -1.2
KDM3B-205ENST00000508386 TSPYL4Q9UJ04 414 aa7.55□□□□□ -1.2
KDM3B-205ENST00000508386 ZNF646O15015 1829 aaPredicted RBP7.55□□□□□ -1.2
KDM3B-205ENST00000508386 USP17L3A6NCW0 530 aa7.54□□□□□ -1.2
KDM3B-205ENST00000508386 USP17L4A6NCW7 530 aa7.54□□□□□ -1.2
KDM3B-205ENST00000508386 IRS4O14654 1257 aaPredicted RBP7.54□□□□□ -1.2
KDM3B-205ENST00000508386 SASH1O94885 1247 aa7.54□□□□□ -1.2
KDM3B-205ENST00000508386 TTLL12Q14166 644 aaPredicted RBP7.54□□□□□ -1.2
KDM3B-205ENST00000508386 USP17L1Q7RTZ2 530 aa7.54□□□□□ -1.2
KDM3B-205ENST00000508386 TXNRD3Q86VQ6 643 aa7.54□□□□□ -1.2
KDM3B-205ENST00000508386 PLBD2Q8NHP8 589 aa7.54□□□□□ -1.2
KDM3B-205ENST00000508386 ZBED3Q96IU2 234 aaPredicted RBP7.54□□□□□ -1.2
KDM3B-205ENST00000508386 CHPF2Q9P2E5 772 aa7.54□□□□□ -1.2
KDM3B-205ENST00000508386 GGA1Q9UJY5 639 aa7.54□□□□□ -1.2
KDM3B-205ENST00000508386 PCDHAC2Q9Y5I4 1007 aa7.54□□□□□ -1.2
KDM3B-205ENST00000508386 PSME4Q14997 1843 aa7.54□□□□□ -1.2
KDM3B-205ENST00000508386 SSC5DA1L4H1 1573 aa7.54□□□□□ -1.2
KDM3B-205ENST00000508386 RBBP6Q7Z6E9 1792 aaKnown RBP7.54□□□□□ -1.2
KDM3B-205ENST00000508386 AOX1Q06278 1338 aa7.53□□□□□ -1.2
KDM3B-205ENST00000508386 DLL1O00548 723 aa7.53□□□□□ -1.2
KDM3B-205ENST00000508386 GTPBP6O43824 516 aaPredicted RBP7.53□□□□□ -1.2
KDM3B-205ENST00000508386 SREBF2Q12772 1141 aa7.53□□□□□ -1.2
KDM3B-205ENST00000508386 TRIM28Q13263 835 aaKnown RBP7.53□□□□□ -1.2
KDM3B-205ENST00000508386 CRHR2Q13324 411 aa7.53□□□□□ -1.2
KDM3B-205ENST00000508386 ANKRD13DQ6ZTN6 518 aa7.53□□□□□ -1.2
KDM3B-205ENST00000508386 ZNF333Q96JL9 665 aa7.53□□□□□ -1.2
KDM3B-205ENST00000508386 CCDC85AQ96PX6 553 aaPredicted RBP7.53□□□□□ -1.2
KDM3B-205ENST00000508386 ANKIB1Q9P2G1 1089 aa7.53□□□□□ -1.2
KDM3B-205ENST00000508386 ANGEL1Q9UNK9 670 aaKnown RBP7.53□□□□□ -1.2
KDM3B-205ENST00000508386 KLRK1P26718 216 aa7.52□□□□□ -1.21
KDM3B-205ENST00000508386 MAP3K11Q16584 847 aa7.52□□□□□ -1.21
KDM3B-205ENST00000508386 PODNQ7Z5L7 613 aa7.52□□□□□ -1.21
KDM3B-205ENST00000508386 PDCD7Q8N8D1 485 aaKnown RBP7.52□□□□□ -1.21
KDM3B-205ENST00000508386 WNK4Q96J92 1243 aa7.52□□□□□ -1.21
KDM3B-205ENST00000508386 PRO3102Q9H379 93 aa7.52□□□□□ -1.21
KDM3B-205ENST00000508386 RBM27Q9P2N5 1060 aaKnown RBP7.52□□□□□ -1.21
KDM3B-205ENST00000508386 TESPA1A2RU30 521 aaPredicted RBP7.51□□□□□ -1.21
KDM3B-205ENST00000508386 CHL1O00533 1208 aa7.51□□□□□ -1.21
KDM3B-205ENST00000508386 ALDH1A1P00352 501 aa7.51□□□□□ -1.21
KDM3B-205ENST00000508386 RIPK4P57078 832 aa7.51□□□□□ -1.21
KDM3B-205ENST00000508386 ARMC9Q7Z3E5 817 aa7.51□□□□□ -1.21
KDM3B-205ENST00000508386 ZBTB38Q8NAP3 1195 aaPredicted RBP7.51□□□□□ -1.21
KDM3B-205ENST00000508386 SLC10A4Q96EP9 437 aa7.51□□□□□ -1.21
KDM3B-205ENST00000508386 MS4A4AQ96JQ5 239 aa7.51□□□□□ -1.21
KDM3B-205ENST00000508386 EFCC1Q9HA90 598 aa7.51□□□□□ -1.21
KDM3B-205ENST00000508386 PTCH2Q9Y6C5 1203 aa7.51□□□□□ -1.21
KDM3B-205ENST00000508386 SPTBN5Q9NRC6 3674 aaKnown RBP7.5□□□□□ -1.21
KDM3B-205ENST00000508386 MANSC4A6NHS7 340 aaPredicted RBP7.5□□□□□ -1.21
KDM3B-205ENST00000508386 G3V3G9 751 aa7.5□□□□□ -1.21
KDM3B-205ENST00000508386 USP2O75604 605 aaPredicted RBP7.5□□□□□ -1.21
KDM3B-205ENST00000508386 MYCP01106 439 aaPredicted RBP7.5□□□□□ -1.21
KDM3B-205ENST00000508386 ATP2B4P23634 1241 aa7.5□□□□□ -1.21
KDM3B-205ENST00000508386 INHBEP58166 350 aa7.5□□□□□ -1.21
KDM3B-205ENST00000508386 CERS5Q8N5B7 392 aa7.5□□□□□ -1.21
KDM3B-205ENST00000508386 SHISA4Q96DD7 197 aa7.5□□□□□ -1.21
KDM3B-205ENST00000508386 ERO1AQ96HE7 468 aa7.5□□□□□ -1.21
KDM3B-205ENST00000508386 DEFB129Q9H1M3 183 aa7.5□□□□□ -1.21
KDM3B-205ENST00000508386 BABAM1Q9NWV8 329 aa7.5□□□□□ -1.21
KDM3B-205ENST00000508386 MINPP1Q9UNW1 487 aa7.5□□□□□ -1.21
KDM3B-205ENST00000508386 LAMA2P24043 3122 aaKnown RBP7.5□□□□□ -1.21
KDM3B-205ENST00000508386 XDHP47989 1333 aa7.5□□□□□ -1.21
KDM3B-205ENST00000508386 POTEMA6NI47 508 aa7.49□□□□□ -1.21
KDM3B-205ENST00000508386 SOX1O00570 391 aaPredicted RBP7.49□□□□□ -1.21
KDM3B-205ENST00000508386 ZBTB48P10074 688 aaPredicted RBP7.49□□□□□ -1.21
KDM3B-205ENST00000508386 TMPOP42166 694 aaKnown RBP7.49□□□□□ -1.21
KDM3B-205ENST00000508386 PLCB2Q00722 1185 aa7.49□□□□□ -1.21
KDM3B-205ENST00000508386 SP3Q02447 781 aa7.49□□□□□ -1.21
KDM3B-205ENST00000508386 NBPF12Q5TAG4 269 aaPredicted RBP7.49□□□□□ -1.21
KDM3B-205ENST00000508386 STRIP1Q5VSL9 837 aa7.49□□□□□ -1.21
KDM3B-205ENST00000508386 UBE2Q1Q7Z7E8 422 aa7.49□□□□□ -1.21
KDM3B-205ENST00000508386 KIAA0825Q8IV33 1275 aa7.49□□□□□ -1.21
KDM3B-205ENST00000508386 CDAN1Q8IWY9 1227 aa7.49□□□□□ -1.21
KDM3B-205ENST00000508386 SLAIN1Q8ND83 568 aa7.49□□□□□ -1.21
KDM3B-205ENST00000508386 SLC17A8Q8NDX2 589 aa7.49□□□□□ -1.21
KDM3B-205ENST00000508386 SH3TC2Q8TF17 1288 aa7.49□□□□□ -1.21
KDM3B-205ENST00000508386 FAM163AQ96GL9 167 aaPredicted RBP7.49□□□□□ -1.21
KDM3B-205ENST00000508386 ARHGAP39Q9C0H5 1083 aa7.49□□□□□ -1.21
KDM3B-205ENST00000508386 PHAXQ9H814 394 aaKnown RBP7.49□□□□□ -1.21
KDM3B-205ENST00000508386 IRS2Q9Y4H2 1338 aa7.49□□□□□ -1.21
KDM3B-205ENST00000508386 LAMB1P07942 1786 aa7.48□□□□□ -1.21
KDM3B-205ENST00000508386 ZSWIM8A7E2V4 1837 aa7.48□□□□□ -1.21
KDM3B-205ENST00000508386 EYSQ5T1H1 3165 aa7.48□□□□□ -1.21
KDM3B-205ENST00000508386 SNAP23O00161 211 aa7.48□□□□□ -1.21
KDM3B-205ENST00000508386 PDE8AO60658 829 aa7.48□□□□□ -1.21
KDM3B-205ENST00000508386 CTGFP29279 349 aa7.48□□□□□ -1.21
KDM3B-205ENST00000508386 NF2P35240 595 aa7.48□□□□□ -1.21
KDM3B-205ENST00000508386 MTFR1Q15390 333 aa7.48□□□□□ -1.21
KDM3B-205ENST00000508386 HDGFL1Q5TGJ6 251 aa7.48□□□□□ -1.21
KDM3B-205ENST00000508386 TTLL5Q6EMB2 1281 aa7.48□□□□□ -1.21
KDM3B-205ENST00000508386 POTEGQ6S5H5 508 aa7.48□□□□□ -1.21
KDM3B-205ENST00000508386 BRI3BPQ8WY22 251 aa7.48□□□□□ -1.21
KDM3B-205ENST00000508386 PRMT6Q96LA8 375 aaPredicted RBP7.48□□□□□ -1.21
KDM3B-205ENST00000508386 MED23Q9ULK4 1368 aa7.47□□□□□ -1.21
KDM3B-205ENST00000508386 PCCAP05165 728 aaPredicted RBP7.47□□□□□ -1.21
KDM3B-205ENST00000508386 CCT4P50991 539 aaKnown RBP7.47□□□□□ -1.21
KDM3B-205ENST00000508386 GTF2IP78347 998 aa7.47□□□□□ -1.21
KDM3B-205ENST00000508386 CCDC152Q4G0S7 254 aa7.47□□□□□ -1.21
KDM3B-205ENST00000508386 APOBEC3FQ8IUX4 373 aaKnown RBP7.47□□□□□ -1.21
KDM3B-205ENST00000508386 ANKRD18AQ8IVF6 992 aa7.47□□□□□ -1.21
KDM3B-205ENST00000508386 FAM43AQ8N2R8 423 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms