RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 NCBP1Q09161 790 aaKnown RBP5.81□□□□□ -1.48
HMGB3P16-201ENST00000508037 TEFQ10587 303 aa5.81□□□□□ -1.48
HMGB3P16-201ENST00000508037 NMIQ13287 307 aaPredicted RBP5.81□□□□□ -1.48
HMGB3P16-201ENST00000508037 ATP2B3Q16720 1220 aa5.81□□□□□ -1.48
HMGB3P16-201ENST00000508037 ADCK5Q3MIX3 580 aa5.81□□□□□ -1.48
HMGB3P16-201ENST00000508037 PLEKHO1Q53GL0 409 aaPredicted RBP5.81□□□□□ -1.48
HMGB3P16-201ENST00000508037 KSR2Q6VAB6 950 aa5.81□□□□□ -1.48
HMGB3P16-201ENST00000508037 CDC37L1Q7L3B6 337 aa5.81□□□□□ -1.48
HMGB3P16-201ENST00000508037 ZNF771Q7L3S4 317 aaPredicted RBP5.81□□□□□ -1.48
HMGB3P16-201ENST00000508037 SULF1Q8IWU6 871 aa5.81□□□□□ -1.48
HMGB3P16-201ENST00000508037 MPNDQ8N594 471 aa5.81□□□□□ -1.48
HMGB3P16-201ENST00000508037 PI4KAP1Q8N8J0 262 aa5.81□□□□□ -1.48
HMGB3P16-201ENST00000508037 CCDC150Q8NCX0 1101 aa5.81□□□□□ -1.48
HMGB3P16-201ENST00000508037 LINS1Q8NG48 757 aa5.81□□□□□ -1.48
HMGB3P16-201ENST00000508037 FSD1Q9BTV5 496 aa5.81□□□□□ -1.48
HMGB3P16-201ENST00000508037 IL25Q9H293 177 aa5.81□□□□□ -1.48
HMGB3P16-201ENST00000508037 CTNNA3Q9UI47 895 aa5.81□□□□□ -1.48
HMGB3P16-201ENST00000508037 DDX41Q9UJV9 622 aaKnown RBP5.81□□□□□ -1.48
HMGB3P16-201ENST00000508037 ZHX1Q9UKY1 873 aaPredicted RBP5.81□□□□□ -1.48
HMGB3P16-201ENST00000508037 TPCN1Q9ULQ1 816 aa5.81□□□□□ -1.48
HMGB3P16-201ENST00000508037 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.81□□□□□ -1.48
HMGB3P16-201ENST00000508037 JCADQ9P266 1359 aa5.8□□□□□ -1.48
HMGB3P16-201ENST00000508037 MED1Q15648 1581 aaPredicted RBP5.8□□□□□ -1.48
HMGB3P16-201ENST00000508037 UTYO14607 1347 aa5.8□□□□□ -1.48
HMGB3P16-201ENST00000508037 ZBTB7CA1YPR0 619 aa5.8□□□□□ -1.48
HMGB3P16-201ENST00000508037 AP5Z1O43299 807 aa5.8□□□□□ -1.48
HMGB3P16-201ENST00000508037 ACTN4O43707 911 aaKnown RBP5.8□□□□□ -1.48
HMGB3P16-201ENST00000508037 MYO1BO43795 1136 aa5.8□□□□□ -1.48
HMGB3P16-201ENST00000508037 SLC10A3P09131 477 aa5.8□□□□□ -1.48
HMGB3P16-201ENST00000508037 NBPF7P0C2Y1 421 aaPredicted RBP5.8□□□□□ -1.48
HMGB3P16-201ENST00000508037 HSP90B1P14625 803 aaKnown RBP5.8□□□□□ -1.48
HMGB3P16-201ENST00000508037 EIF2S2P20042 333 aaKnown RBP5.8□□□□□ -1.48
HMGB3P16-201ENST00000508037 U2AF2P26368 475 aaKnown RBP eCLIP5.8□□□□□ -1.48
HMGB3P16-201ENST00000508037 COPS2P61201 443 aa5.8□□□□□ -1.48
HMGB3P16-201ENST00000508037 FAM69CQ0P6D2 419 aa5.8□□□□□ -1.48
HMGB3P16-201ENST00000508037 NEXNQ0ZGT2 675 aa5.8□□□□□ -1.48
HMGB3P16-201ENST00000508037 CAMK4Q16566 473 aa5.8□□□□□ -1.48
HMGB3P16-201ENST00000508037 TPRNQ4KMQ1 711 aa5.8□□□□□ -1.48
HMGB3P16-201ENST00000508037 AKAP4Q5JQC9 854 aa5.8□□□□□ -1.48
HMGB3P16-201ENST00000508037 NUTM2GQ5VZR2 741 aa5.8□□□□□ -1.48
HMGB3P16-201ENST00000508037 USPL1Q5W0Q7 1092 aa5.8□□□□□ -1.48
HMGB3P16-201ENST00000508037 LRRC8AQ8IWT6 810 aa5.8□□□□□ -1.48
HMGB3P16-201ENST00000508037 CKAP2LQ8IYA6 745 aa5.8□□□□□ -1.48
HMGB3P16-201ENST00000508037 NECAB1Q8N987 351 aa5.8□□□□□ -1.48
HMGB3P16-201ENST00000508037 KRI1Q8N9T8 703 aaKnown RBP5.8□□□□□ -1.48
HMGB3P16-201ENST00000508037 RDH13Q8NBN7 331 aa5.8□□□□□ -1.48
HMGB3P16-201ENST00000508037 RGS22Q8NE09 1264 aa5.8□□□□□ -1.48
HMGB3P16-201ENST00000508037 GTF3C6Q969F1 213 aa5.8□□□□□ -1.48
HMGB3P16-201ENST00000508037 C16orf45Q96MC5 204 aaPredicted RBP5.8□□□□□ -1.48
HMGB3P16-201ENST00000508037 NEK1Q96PY6 1258 aa5.8□□□□□ -1.48
HMGB3P16-201ENST00000508037 SRRTQ9BXP5 876 aaKnown RBP5.8□□□□□ -1.48
HMGB3P16-201ENST00000508037 PHAXQ9H814 394 aaKnown RBP5.8□□□□□ -1.48
HMGB3P16-201ENST00000508037 ARGLU1Q9NWB6 273 aaPredicted RBP5.8□□□□□ -1.48
HMGB3P16-201ENST00000508037 CHPF2Q9P2E5 772 aa5.8□□□□□ -1.48
HMGB3P16-201ENST00000508037 TBX22Q9Y458 520 aa5.8□□□□□ -1.48
HMGB3P16-201ENST00000508037 TCHHQ07283 1943 aa5.8□□□□□ -1.48
HMGB3P16-201ENST00000508037 MED23Q9ULK4 1368 aa5.8□□□□□ -1.48
HMGB3P16-201ENST00000508037 BTBD11A6QL63 1104 aa5.79□□□□□ -1.48
HMGB3P16-201ENST00000508037 GRM8O00222 908 aa5.79□□□□□ -1.48
HMGB3P16-201ENST00000508037 SLU7O95391 586 aaKnown RBP5.79□□□□□ -1.48
HMGB3P16-201ENST00000508037 SKILP12757 684 aa5.79□□□□□ -1.48
HMGB3P16-201ENST00000508037 CPA1P15085 419 aa5.79□□□□□ -1.48
HMGB3P16-201ENST00000508037 FGD1P98174 961 aa5.79□□□□□ -1.48
HMGB3P16-201ENST00000508037 FAM160A1Q05DH4 1040 aa5.79□□□□□ -1.48
HMGB3P16-201ENST00000508037 ST3GAL1Q11201 340 aa5.79□□□□□ -1.48
HMGB3P16-201ENST00000508037 RESTQ13127 1097 aa5.79□□□□□ -1.48
HMGB3P16-201ENST00000508037 BMS1Q14692 1282 aaKnown RBP5.79□□□□□ -1.48
HMGB3P16-201ENST00000508037 IQCB1Q15051 598 aa5.79□□□□□ -1.48
HMGB3P16-201ENST00000508037 LRRFIP1Q32MZ4 808 aaKnown RBP5.79□□□□□ -1.48
HMGB3P16-201ENST00000508037 C1orf141Q5JVX7 400 aa5.79□□□□□ -1.48
HMGB3P16-201ENST00000508037 LARP1Q6PKG0 1096 aaKnown RBP5.79□□□□□ -1.48
HMGB3P16-201ENST00000508037 FERMT3Q86UX7 667 aa5.79□□□□□ -1.48
HMGB3P16-201ENST00000508037 KCNH5Q8NCM2 988 aa5.79□□□□□ -1.48
HMGB3P16-201ENST00000508037 NLRP7Q8WX94 980 aa5.79□□□□□ -1.48
HMGB3P16-201ENST00000508037 TSC1Q92574 1164 aa5.79□□□□□ -1.48
HMGB3P16-201ENST00000508037 ZNF516Q92618 1163 aa5.79□□□□□ -1.48
HMGB3P16-201ENST00000508037 PHOX2BQ99453 314 aa5.79□□□□□ -1.48
HMGB3P16-201ENST00000508037 BPIFA3Q9BQP9 254 aa5.79□□□□□ -1.48
HMGB3P16-201ENST00000508037 TSPYL1Q9H0U9 437 aa5.79□□□□□ -1.48
HMGB3P16-201ENST00000508037 OSBPL5Q9H0X9 879 aaPredicted RBP5.79□□□□□ -1.48
HMGB3P16-201ENST00000508037 DNAJC25Q9H1X3 360 aa5.79□□□□□ -1.48
HMGB3P16-201ENST00000508037 RCOR1Q9UKL0 485 aa5.79□□□□□ -1.48
HMGB3P16-201ENST00000508037 MAP3K2Q9Y2U5 619 aa5.79□□□□□ -1.48
HMGB3P16-201ENST00000508037 CHMP3Q9Y3E7 222 aa5.79□□□□□ -1.48
HMGB3P16-201ENST00000508037 NWD1Q149M9 1564 aa5.79□□□□□ -1.48
HMGB3P16-201ENST00000508037 UBR1Q8IWV7 1749 aa5.79□□□□□ -1.48
HMGB3P16-201ENST00000508037 ADCY9O60503 1353 aa5.79□□□□□ -1.48
HMGB3P16-201ENST00000508037 MRC1P22897 1456 aa5.78□□□□□ -1.48
HMGB3P16-201ENST00000508037 LMTK3Q96Q04 1460 aa5.78□□□□□ -1.48
HMGB3P16-201ENST00000508037 A0A1W2PQ27 194 aa5.78□□□□□ -1.48
HMGB3P16-201ENST00000508037 A0A1W2PQ64 194 aa5.78□□□□□ -1.48
HMGB3P16-201ENST00000508037 A0A1W2PQD8 194 aa5.78□□□□□ -1.48
HMGB3P16-201ENST00000508037 CCDC69A6NI79 296 aa5.78□□□□□ -1.48
HMGB3P16-201ENST00000508037 CBFA2T2O43439 604 aa5.78□□□□□ -1.48
HMGB3P16-201ENST00000508037 DHX16O60231 1041 aaKnown RBP5.78□□□□□ -1.48
HMGB3P16-201ENST00000508037 PFKFB2O60825 505 aa5.78□□□□□ -1.48
HMGB3P16-201ENST00000508037 ZPR1O75312 459 aa5.78□□□□□ -1.48
HMGB3P16-201ENST00000508037 NR1I2O75469 434 aa5.78□□□□□ -1.48
HMGB3P16-201ENST00000508037 TAF5LO75529 589 aa5.78□□□□□ -1.48
HMGB3P16-201ENST00000508037 ATP5JP18859 108 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms