RNA–Protein interactions for RNA: ENST00000507845.5

UBE2D3-221, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-221ENST00000507845 ZNRF3Q9ULT6 936 aa16.54■□□□□ 0.24
UBE2D3-221ENST00000507845 FZD9O00144 591 aa16.53■□□□□ 0.24
UBE2D3-221ENST00000507845 IFIT2P09913 472 aaKnown RBP16.53■□□□□ 0.24
UBE2D3-221ENST00000507845 NUCB1Q02818 461 aa16.53■□□□□ 0.24
UBE2D3-221ENST00000507845 CCDC102BQ68D86 513 aa16.53■□□□□ 0.24
UBE2D3-221ENST00000507845 PODNQ7Z5L7 613 aa16.53■□□□□ 0.24
UBE2D3-221ENST00000507845 VPS37DQ86XT2 251 aa16.53■□□□□ 0.24
UBE2D3-221ENST00000507845 TDRD7Q8NHU6 1098 aaKnown RBP16.53■□□□□ 0.24
UBE2D3-221ENST00000507845 ZC3H4Q9UPT8 1303 aaKnown RBP16.52■□□□□ 0.24
UBE2D3-221ENST00000507845 GORABQ5T7V8 394 aa16.52■□□□□ 0.24
UBE2D3-221ENST00000507845 CENPQQ7L2Z9 268 aaPredicted RBP16.52■□□□□ 0.24
UBE2D3-221ENST00000507845 KCNQ5Q9NR82 932 aa16.52■□□□□ 0.24
UBE2D3-221ENST00000507845 ZNF541Q9H0D2 1346 aa16.51■□□□□ 0.23
UBE2D3-221ENST00000507845 COL1A1P02452 1464 aaPredicted RBP16.51■□□□□ 0.23
UBE2D3-221ENST00000507845 CHD1LQ86WJ1 897 aa16.51■□□□□ 0.23
UBE2D3-221ENST00000507845 C16orf71Q8IYS4 520 aaPredicted RBP16.51■□□□□ 0.23
UBE2D3-221ENST00000507845 LNPKQ9C0E8 428 aa16.51■□□□□ 0.23
UBE2D3-221ENST00000507845 GNL3LQ9NVN8 582 aaKnown RBP16.51■□□□□ 0.23
UBE2D3-221ENST00000507845 ZBTB47Q9UFB7 747 aaPredicted RBP16.51■□□□□ 0.23
UBE2D3-221ENST00000507845 IQSEC3Q9UPP2 1182 aaPredicted RBP16.51■□□□□ 0.23
UBE2D3-221ENST00000507845 RAD17O75943 681 aa16.5■□□□□ 0.23
UBE2D3-221ENST00000507845 ARID4AP29374 1257 aaPredicted RBP16.5■□□□□ 0.23
UBE2D3-221ENST00000507845 EIF6P56537 245 aaKnown RBP16.5■□□□□ 0.23
UBE2D3-221ENST00000507845 CXCL9Q07325 125 aa16.5■□□□□ 0.23
UBE2D3-221ENST00000507845 CCDC158Q5M9N0 1113 aa16.5■□□□□ 0.23
UBE2D3-221ENST00000507845 MYO5AQ9Y4I1 1855 aaKnown RBP16.5■□□□□ 0.23
UBE2D3-221ENST00000507845 FAM205AQ6ZU69 1335 aa16.49■□□□□ 0.23
UBE2D3-221ENST00000507845 SEMA3EO15041 775 aa16.49■□□□□ 0.23
UBE2D3-221ENST00000507845 UQCRFS1P1P0C7P4 283 aa16.49■□□□□ 0.23
UBE2D3-221ENST00000507845 TTC39AQ5SRH9 613 aa16.49■□□□□ 0.23
UBE2D3-221ENST00000507845 OTUD7AQ8TE49 926 aaPredicted RBP16.49■□□□□ 0.23
UBE2D3-221ENST00000507845 ZNF512BQ96KM6 892 aaPredicted RBP16.49■□□□□ 0.23
UBE2D3-221ENST00000507845 SALL3Q9BXA9 1300 aa16.48■□□□□ 0.23
UBE2D3-221ENST00000507845 USP17L3A6NCW0 530 aa16.48■□□□□ 0.23
UBE2D3-221ENST00000507845 USP17L4A6NCW7 530 aa16.48■□□□□ 0.23
UBE2D3-221ENST00000507845 PSMD14O00487 310 aa16.48■□□□□ 0.23
UBE2D3-221ENST00000507845 FRAT2O75474 233 aaPredicted RBP16.48■□□□□ 0.23
UBE2D3-221ENST00000507845 GTF2IP78347 998 aa16.48■□□□□ 0.23
UBE2D3-221ENST00000507845 RASGRF1Q13972 1273 aa16.48■□□□□ 0.23
UBE2D3-221ENST00000507845 SCARF1Q14162 830 aa16.48■□□□□ 0.23
UBE2D3-221ENST00000507845 STRIP1Q5VSL9 837 aa16.48■□□□□ 0.23
UBE2D3-221ENST00000507845 CIAPIN1Q6FI81 312 aa16.48■□□□□ 0.23
UBE2D3-221ENST00000507845 USP17L1Q7RTZ2 530 aa16.48■□□□□ 0.23
UBE2D3-221ENST00000507845 VIL1P09327 827 aaKnown RBP16.47■□□□□ 0.23
UBE2D3-221ENST00000507845 MCAMP43121 646 aa16.47■□□□□ 0.23
UBE2D3-221ENST00000507845 CHAF1AQ13111 956 aaPredicted RBP16.47■□□□□ 0.23
UBE2D3-221ENST00000507845 TNIP1Q15025 636 aa16.47■□□□□ 0.23
UBE2D3-221ENST00000507845 DACT2Q5SW24 774 aa16.47■□□□□ 0.23
UBE2D3-221ENST00000507845 TTLL5Q6EMB2 1281 aa16.47■□□□□ 0.23
UBE2D3-221ENST00000507845 HMG20BQ9P0W2 317 aa16.47■□□□□ 0.23
UBE2D3-221ENST00000507845 DENND2AQ9ULE3 1009 aa16.47■□□□□ 0.23
UBE2D3-221ENST00000507845 JAG2Q9Y219 1238 aa16.47■□□□□ 0.23
UBE2D3-221ENST00000507845 PDS5AQ29RF7 1337 aaKnown RBP16.46■□□□□ 0.23
UBE2D3-221ENST00000507845 FBXW7Q969H0 707 aa16.46■□□□□ 0.23
UBE2D3-221ENST00000507845 ECHDC1Q9NTX5 307 aa16.46■□□□□ 0.23
UBE2D3-221ENST00000507845 GJA3Q9Y6H8 435 aa16.46■□□□□ 0.23
UBE2D3-221ENST00000507845 WDR90Q96KV7 1748 aa16.45■□□□□ 0.22
UBE2D3-221ENST00000507845 DOCK2Q92608 1830 aa16.45■□□□□ 0.22
UBE2D3-221ENST00000507845 GLTPD2A6NH11 291 aa16.45■□□□□ 0.22
UBE2D3-221ENST00000507845 DDNO94850 711 aaPredicted RBP16.45■□□□□ 0.22
UBE2D3-221ENST00000507845 ATP5JP18859 108 aa16.45■□□□□ 0.22
UBE2D3-221ENST00000507845 MX1P20591 662 aa16.45■□□□□ 0.22
UBE2D3-221ENST00000507845 PDE4AP27815 886 aa16.45■□□□□ 0.22
UBE2D3-221ENST00000507845 FKBP1AP62942 108 aaKnown RBP16.45■□□□□ 0.22
UBE2D3-221ENST00000507845 TSHZ3Q63HK5 1081 aa16.45■□□□□ 0.22
UBE2D3-221ENST00000507845 RSBN1LQ6PCB5 846 aaPredicted RBP16.45■□□□□ 0.22
UBE2D3-221ENST00000507845 PI16Q6UXB8 463 aa16.45■□□□□ 0.22
UBE2D3-221ENST00000507845 GPC2Q8N158 579 aa16.45■□□□□ 0.22
UBE2D3-221ENST00000507845 SPATA5Q8NB90 893 aa16.45■□□□□ 0.22
UBE2D3-221ENST00000507845 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.45■□□□□ 0.22
UBE2D3-221ENST00000507845 GPATCH3Q96I76 525 aa16.45■□□□□ 0.22
UBE2D3-221ENST00000507845 MXD3Q9BW11 206 aa16.45■□□□□ 0.22
UBE2D3-221ENST00000507845 STAP2Q9UGK3 403 aa16.45■□□□□ 0.22
UBE2D3-221ENST00000507845 TTC41PQ6P2S7 1318 aa16.45■□□□□ 0.22
UBE2D3-221ENST00000507845 DPY19L2Q6NUT2 758 aa16.44■□□□□ 0.22
UBE2D3-221ENST00000507845 CERS5Q8N5B7 392 aa16.44■□□□□ 0.22
UBE2D3-221ENST00000507845 WDR66Q8TBY9 1149 aa16.44■□□□□ 0.22
UBE2D3-221ENST00000507845 GMLQ99445 158 aa16.44■□□□□ 0.22
UBE2D3-221ENST00000507845 SNRKQ9NRH2 765 aa16.44■□□□□ 0.22
UBE2D3-221ENST00000507845 MYH7P12883 1935 aa16.44■□□□□ 0.22
UBE2D3-221ENST00000507845 SCN4AP35499 1836 aa16.44■□□□□ 0.22
UBE2D3-221ENST00000507845 PRR29P0C7W0 189 aa16.43■□□□□ 0.22
UBE2D3-221ENST00000507845 ZAP70P43403 619 aa16.43■□□□□ 0.22
UBE2D3-221ENST00000507845 GMPSP49915 693 aaPredicted RBP16.43■□□□□ 0.22
UBE2D3-221ENST00000507845 PDE1AP54750 535 aa16.43■□□□□ 0.22
UBE2D3-221ENST00000507845 MFSD14BQ5SR56 506 aa16.43■□□□□ 0.22
UBE2D3-221ENST00000507845 PLEKHM2Q8IWE5 1019 aa16.43■□□□□ 0.22
UBE2D3-221ENST00000507845 PI4K2BQ8TCG2 481 aa16.43■□□□□ 0.22
UBE2D3-221ENST00000507845 TBC1D22AQ8WUA7 517 aa16.43■□□□□ 0.22
UBE2D3-221ENST00000507845 AK9Q5TCS8 1911 aa16.43■□□□□ 0.22
UBE2D3-221ENST00000507845 MYO3BQ8WXR4 1341 aa16.43■□□□□ 0.22
UBE2D3-221ENST00000507845 SALL1Q9NSC2 1324 aa16.43■□□□□ 0.22
UBE2D3-221ENST00000507845 MAST2Q6P0Q8 1798 aa16.42■□□□□ 0.22
UBE2D3-221ENST00000507845 RPS12P25398 132 aaKnown RBP16.42■□□□□ 0.22
UBE2D3-221ENST00000507845 GRIK5Q16478 980 aa16.42■□□□□ 0.22
UBE2D3-221ENST00000507845 AGBL3Q8NEM8 1001 aa16.42■□□□□ 0.22
UBE2D3-221ENST00000507845 HAUS7Q99871 368 aa16.42■□□□□ 0.22
UBE2D3-221ENST00000507845 BOLA2Q9H3K6 86 aa16.42■□□□□ 0.22
UBE2D3-221ENST00000507845 NDUFB9Q9Y6M9 179 aa16.42■□□□□ 0.22
UBE2D3-221ENST00000507845 MYH2Q9UKX2 1941 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms