RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 ALG1Q9BT22 464 aa11.14□□□□□ -0.63
PHF3-208ENST00000506783 UTP14AQ9BVJ6 771 aaKnown RBP11.14□□□□□ -0.63
PHF3-208ENST00000506783 SENP2Q9HC62 589 aa11.14□□□□□ -0.63
PHF3-208ENST00000506783 ARHGEF28Q8N1W1 1705 aaKnown RBP11.14□□□□□ -0.63
PHF3-208ENST00000506783 RANBP6O60518 1105 aaKnown RBP11.14□□□□□ -0.63
PHF3-208ENST00000506783 KRT32Q14532 448 aa11.14□□□□□ -0.63
PHF3-208ENST00000506783 KIAA1524Q8TCG1 905 aa11.14□□□□□ -0.63
PHF3-208ENST00000506783 PCDHA7Q9UN72 937 aa11.14□□□□□ -0.63
PHF3-208ENST00000506783 AKAP17AQ02040 695 aaKnown RBP11.14□□□□□ -0.63
PHF3-208ENST00000506783 XPO4Q9C0E2 1151 aaKnown RBP11.14□□□□□ -0.63
PHF3-208ENST00000506783 RAI14Q9P0K7 980 aa11.14□□□□□ -0.63
PHF3-208ENST00000506783 IL2RBP14784 551 aa11.13□□□□□ -0.63
PHF3-208ENST00000506783 ERCC6LQ2NKX8 1250 aa11.13□□□□□ -0.63
PHF3-208ENST00000506783 TEX35Q5T0J7 233 aa11.13□□□□□ -0.63
PHF3-208ENST00000506783 CLEC17AQ6ZS10 378 aa11.13□□□□□ -0.63
PHF3-208ENST00000506783 CCDC34Q96HJ3 373 aa11.13□□□□□ -0.63
PHF3-208ENST00000506783 TPM4P67936 248 aa11.13□□□□□ -0.63
PHF3-208ENST00000506783 TMEM67Q5HYA8 995 aa11.13□□□□□ -0.63
PHF3-208ENST00000506783 ZNF710Q8N1W2 664 aa11.13□□□□□ -0.63
PHF3-208ENST00000506783 DESI2Q9BSY9 194 aa11.13□□□□□ -0.63
PHF3-208ENST00000506783 SETBP1Q9Y6X0 1596 aa11.13□□□□□ -0.63
PHF3-208ENST00000506783 PPLO60437 1756 aa11.13□□□□□ -0.63
PHF3-208ENST00000506783 SPTLC2O15270 562 aa11.13□□□□□ -0.63
PHF3-208ENST00000506783 GPAA1O43292 621 aa11.13□□□□□ -0.63
PHF3-208ENST00000506783 PHKG2P15735 406 aa11.13□□□□□ -0.63
PHF3-208ENST00000506783 CDC25AP30304 524 aa11.13□□□□□ -0.63
PHF3-208ENST00000506783 METAP2P50579 478 aaKnown RBP eCLIP11.13□□□□□ -0.63
PHF3-208ENST00000506783 DDB1Q16531 1140 aa11.13□□□□□ -0.63
PHF3-208ENST00000506783 CPLX2Q6PUV4 134 aaKnown RBP11.13□□□□□ -0.63
PHF3-208ENST00000506783 KIF6Q6ZMV9 814 aa11.13□□□□□ -0.63
PHF3-208ENST00000506783 KLHL34Q8N239 644 aa11.13□□□□□ -0.63
PHF3-208ENST00000506783 KBTBD3Q8NAB2 608 aa11.13□□□□□ -0.63
PHF3-208ENST00000506783 CNNM3Q8NE01 707 aa11.13□□□□□ -0.63
PHF3-208ENST00000506783 CLSTN2Q9H4D0 955 aa11.13□□□□□ -0.63
PHF3-208ENST00000506783 ARMT1Q9H993 441 aa11.13□□□□□ -0.63
PHF3-208ENST00000506783 ZBTB22O15209 634 aa11.12□□□□□ -0.63
PHF3-208ENST00000506783 PRKAB2O43741 272 aa11.12□□□□□ -0.63
PHF3-208ENST00000506783 NAPBQ9H115 298 aa11.12□□□□□ -0.63
PHF3-208ENST00000506783 LZTFL1Q9NQ48 299 aa11.12□□□□□ -0.63
PHF3-208ENST00000506783 ANO10Q9NW15 660 aa11.12□□□□□ -0.63
PHF3-208ENST00000506783 FOXN1O15353 648 aa11.12□□□□□ -0.63
PHF3-208ENST00000506783 DHX16O60231 1041 aaKnown RBP11.12□□□□□ -0.63
PHF3-208ENST00000506783 ADKP55263 362 aaKnown RBP11.12□□□□□ -0.63
PHF3-208ENST00000506783 UVSSAQ2YD98 709 aa11.12□□□□□ -0.63
PHF3-208ENST00000506783 HS1BP3Q53T59 392 aa11.12□□□□□ -0.63
PHF3-208ENST00000506783 SMYD4Q8IYR2 804 aaPredicted RBP11.12□□□□□ -0.63
PHF3-208ENST00000506783 NSUN7Q8NE18 718 aaKnown RBP11.12□□□□□ -0.63
PHF3-208ENST00000506783 GOLGA8AA7E2F4 631 aa11.12□□□□□ -0.63
PHF3-208ENST00000506783 PDIA3P30101 505 aaKnown RBP11.12□□□□□ -0.63
PHF3-208ENST00000506783 STX1AQ16623 288 aa11.12□□□□□ -0.63
PHF3-208ENST00000506783 MRPS27Q92552 414 aaKnown RBP11.12□□□□□ -0.63
PHF3-208ENST00000506783 NAT10Q9H0A0 1025 aaKnown RBP11.12□□□□□ -0.63
PHF3-208ENST00000506783 SMIM22K7EJ46 135 aa11.11□□□□□ -0.63
PHF3-208ENST00000506783 PHACTR2O75167 634 aa11.11□□□□□ -0.63
PHF3-208ENST00000506783 SYKP43405 635 aa11.11□□□□□ -0.63
PHF3-208ENST00000506783 UBASH3AP57075 661 aa11.11□□□□□ -0.63
PHF3-208ENST00000506783 ENOX2Q16206 610 aaKnown RBP11.11□□□□□ -0.63
PHF3-208ENST00000506783 MAGEB6Q8N7X4 407 aa11.11□□□□□ -0.63
PHF3-208ENST00000506783 PCMTD1Q96MG8 357 aaPredicted RBP11.11□□□□□ -0.63
PHF3-208ENST00000506783 GDAP1L1Q96MZ0 367 aa11.11□□□□□ -0.63
PHF3-208ENST00000506783 TMEM131LA2VDJ0 1609 aa11.11□□□□□ -0.63
PHF3-208ENST00000506783 CYP2D7A0A087X1C5 515 aa11.11□□□□□ -0.63
PHF3-208ENST00000506783 NBPF26B4DH59 902 aa11.11□□□□□ -0.63
PHF3-208ENST00000506783 RNF113AO15541 343 aaKnown RBP11.11□□□□□ -0.63
PHF3-208ENST00000506783 SNW1Q13573 536 aaKnown RBP11.11□□□□□ -0.63
PHF3-208ENST00000506783 NBPF14Q5TI25 921 aa11.11□□□□□ -0.63
PHF3-208ENST00000506783 NBPF10Q6P3W6 841 aaKnown RBP11.11□□□□□ -0.63
PHF3-208ENST00000506783 NBPF15Q8N660 670 aa11.11□□□□□ -0.63
PHF3-208ENST00000506783 DEPDC5O75140 1603 aa11.11□□□□□ -0.63
PHF3-208ENST00000506783 ADGRL3Q9HAR2 1447 aa11.11□□□□□ -0.63
PHF3-208ENST00000506783 WTIPA6NIX2 430 aaPredicted RBP11.11□□□□□ -0.63
PHF3-208ENST00000506783 MCM5P33992 734 aa11.11□□□□□ -0.63
PHF3-208ENST00000506783 PDIA6Q15084 440 aa11.11□□□□□ -0.63
PHF3-208ENST00000506783 OLFM4Q6UX06 510 aa11.11□□□□□ -0.63
PHF3-208ENST00000506783 SDR42E1Q8WUS8 393 aa11.11□□□□□ -0.63
PHF3-208ENST00000506783 CCDC94Q9BW85 323 aaPredicted RBP11.11□□□□□ -0.63
PHF3-208ENST00000506783 PLEKHA4Q9H4M7 779 aa11.11□□□□□ -0.63
PHF3-208ENST00000506783 GREM2Q9H772 168 aa11.11□□□□□ -0.63
PHF3-208ENST00000506783 MAST3O60307 1309 aa11.11□□□□□ -0.63
PHF3-208ENST00000506783 ZNF202O95125 648 aa11.1□□□□□ -0.63
PHF3-208ENST00000506783 RABEP2Q9H5N1 569 aa11.1□□□□□ -0.63
PHF3-208ENST00000506783 EYA2O00167 538 aa11.1□□□□□ -0.63
PHF3-208ENST00000506783 ITGA6P23229 1130 aa11.1□□□□□ -0.63
PHF3-208ENST00000506783 IARSP41252 1262 aaKnown RBP11.1□□□□□ -0.63
PHF3-208ENST00000506783 WWC3Q9ULE0 1092 aa11.1□□□□□ -0.63
PHF3-208ENST00000506783 ADGRB2O60241 1585 aa11.1□□□□□ -0.63
PHF3-208ENST00000506783 ERICH2A1L162 156 aa11.1□□□□□ -0.63
PHF3-208ENST00000506783 ATP5JP18859 108 aa11.1□□□□□ -0.63
PHF3-208ENST00000506783 GTF2F1P35269 517 aaKnown RBP eCLIP11.1□□□□□ -0.632e-6■■■□□ 17.2
PHF3-208ENST00000506783 HLFQ16534 295 aa11.1□□□□□ -0.63
PHF3-208ENST00000506783 KIF18AQ8NI77 898 aa11.1□□□□□ -0.63
PHF3-208ENST00000506783 MAP7D2Q96T17 732 aa11.1□□□□□ -0.63
PHF3-208ENST00000506783 PUF60Q9UHX1 559 aaKnown RBP11.1□□□□□ -0.63
PHF3-208ENST00000506783 SLC12A7Q9Y666 1083 aa11.1□□□□□ -0.63
PHF3-208ENST00000506783 PCNTO95613 3336 aa11.1□□□□□ -0.63
PHF3-208ENST00000506783 BTBD18B2RXH4 712 aa11.09□□□□□ -0.63
PHF3-208ENST00000506783 PHKA1P46020 1223 aa11.09□□□□□ -0.63
PHF3-208ENST00000506783 GYS2P54840 703 aa11.09□□□□□ -0.63
PHF3-208ENST00000506783 GNG11P61952 73 aa11.09□□□□□ -0.63
PHF3-208ENST00000506783 TRMT1LQ7Z2T5 733 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 136.7 ms