RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 SCN9AQ15858 1988 aa7.9□□□□□ -1.14
GYPB-204ENST00000504951 PSME4Q14997 1843 aa7.9□□□□□ -1.14
GYPB-204ENST00000504951 LAMB1P07942 1786 aa7.9□□□□□ -1.14
GYPB-204ENST00000504951 MYO3BQ8WXR4 1341 aa7.9□□□□□ -1.14
GYPB-204ENST00000504951 A0A1W2PPC1 479 aa7.9□□□□□ -1.14
GYPB-204ENST00000504951 USP17L3A6NCW0 530 aa7.9□□□□□ -1.14
GYPB-204ENST00000504951 USP17L4A6NCW7 530 aa7.9□□□□□ -1.14
GYPB-204ENST00000504951 WNT10BO00744 389 aa7.9□□□□□ -1.14
GYPB-204ENST00000504951 CAPN2P17655 700 aa7.9□□□□□ -1.14
GYPB-204ENST00000504951 EN2P19622 333 aaPredicted RBP7.9□□□□□ -1.14
GYPB-204ENST00000504951 LSM11P83369 360 aaKnown RBP eCLIP7.9□□□□□ -1.14
GYPB-204ENST00000504951 PTPN12Q05209 780 aaKnown RBP7.9□□□□□ -1.14
GYPB-204ENST00000504951 OTUD7BQ6GQQ9 843 aa7.9□□□□□ -1.14
GYPB-204ENST00000504951 COPS6Q7L5N1 327 aa7.9□□□□□ -1.14
GYPB-204ENST00000504951 USP17L1Q7RTZ2 530 aa7.9□□□□□ -1.14
GYPB-204ENST00000504951 NBPF11Q86T75 865 aa7.9□□□□□ -1.14
GYPB-204ENST00000504951 ZBED3Q96IU2 234 aaPredicted RBP7.9□□□□□ -1.14
GYPB-204ENST00000504951 PLEKHF1Q96S99 279 aa7.9□□□□□ -1.14
GYPB-204ENST00000504951 MFRPQ9BY79 579 aa7.9□□□□□ -1.14
GYPB-204ENST00000504951 PNNQ9H307 717 aaKnown RBP7.9□□□□□ -1.14
GYPB-204ENST00000504951 PRO3102Q9H379 93 aa7.9□□□□□ -1.14
GYPB-204ENST00000504951 EFCC1Q9HA90 598 aa7.9□□□□□ -1.14
GYPB-204ENST00000504951 TRIOBPQ9H2D6 2365 aa7.9□□□□□ -1.15
GYPB-204ENST00000504951 COL1A1P02452 1464 aaPredicted RBP7.89□□□□□ -1.15
GYPB-204ENST00000504951 NEFMP07197 916 aa7.89□□□□□ -1.15
GYPB-204ENST00000504951 NFE2L2Q16236 605 aa7.89□□□□□ -1.15
GYPB-204ENST00000504951 STRIP1Q5VSL9 837 aa7.89□□□□□ -1.15
GYPB-204ENST00000504951 MOB2Q70IA6 237 aa7.89□□□□□ -1.15
GYPB-204ENST00000504951 APOBEC3FQ8IUX4 373 aaKnown RBP7.89□□□□□ -1.15
GYPB-204ENST00000504951 PLBD2Q8NHP8 589 aa7.89□□□□□ -1.15
GYPB-204ENST00000504951 SLC10A4Q96EP9 437 aa7.89□□□□□ -1.15
GYPB-204ENST00000504951 GGA1Q9UJY5 639 aa7.89□□□□□ -1.15
GYPB-204ENST00000504951 PPP2R3BQ9Y5P8 575 aa7.89□□□□□ -1.15
GYPB-204ENST00000504951 BRCA2P51587 3418 aa7.89□□□□□ -1.15
GYPB-204ENST00000504951 CEP290O15078 2479 aa7.88□□□□□ -1.15
GYPB-204ENST00000504951 C2orf72A6NCS6 295 aa7.88□□□□□ -1.15
GYPB-204ENST00000504951 GNRH1P01148 92 aa7.88□□□□□ -1.15
GYPB-204ENST00000504951 HOXB7P09629 217 aa7.88□□□□□ -1.15
GYPB-204ENST00000504951 ATP2B4P23634 1241 aa7.88□□□□□ -1.15
GYPB-204ENST00000504951 SP3Q02447 781 aa7.88□□□□□ -1.15
GYPB-204ENST00000504951 PROSER3Q2NL68 480 aa7.88□□□□□ -1.15
GYPB-204ENST00000504951 NBPF9Q3BBW0 867 aa7.88□□□□□ -1.15
GYPB-204ENST00000504951 DACT2Q5SW24 774 aa7.88□□□□□ -1.15
GYPB-204ENST00000504951 OGFOD1Q8N543 542 aa7.88□□□□□ -1.15
GYPB-204ENST00000504951 MTMR14Q8NCE2 650 aa7.88□□□□□ -1.15
GYPB-204ENST00000504951 SLC17A8Q8NDX2 589 aa7.88□□□□□ -1.15
GYPB-204ENST00000504951 XAGE3Q8WTP9 111 aa7.88□□□□□ -1.15
GYPB-204ENST00000504951 DLG5Q8TDM6 1919 aa7.88□□□□□ -1.15
GYPB-204ENST00000504951 XDHP47989 1333 aa7.87□□□□□ -1.15
GYPB-204ENST00000504951 H0YGN5 161 aa7.87□□□□□ -1.15
GYPB-204ENST00000504951 IGF2BP3O00425 579 aaKnown RBP eCLIP7.87□□□□□ -1.15
GYPB-204ENST00000504951 PPP2R1AP30153 589 aa7.87□□□□□ -1.15
GYPB-204ENST00000504951 PRMT2P55345 433 aa7.87□□□□□ -1.15
GYPB-204ENST00000504951 ZBTB38Q8NAP3 1195 aaPredicted RBP7.87□□□□□ -1.15
GYPB-204ENST00000504951 TMC2Q8TDI7 906 aa7.87□□□□□ -1.15
GYPB-204ENST00000504951 KHSRPQ92945 711 aaKnown RBP eCLIP7.87□□□□□ -1.153e-6■■■□□ 17.7
GYPB-204ENST00000504951 THUMPD2Q9BTF0 503 aaKnown RBP7.87□□□□□ -1.15
GYPB-204ENST00000504951 TAF1P21675 1872 aa7.87□□□□□ -1.15
GYPB-204ENST00000504951 CENPFP49454 3210 aa7.87□□□□□ -1.15
GYPB-204ENST00000504951 CUL9Q8IWT3 2517 aa7.87□□□□□ -1.15
GYPB-204ENST00000504951 IRS4O14654 1257 aaPredicted RBP7.86□□□□□ -1.15
GYPB-204ENST00000504951 PPP1R12BO60237 982 aaPredicted RBP7.86□□□□□ -1.15
GYPB-204ENST00000504951 ECM2O94769 699 aaPredicted RBP7.86□□□□□ -1.15
GYPB-204ENST00000504951 UFL1O94874 794 aa7.86□□□□□ -1.15
GYPB-204ENST00000504951 NUDT7P0C024 238 aa7.86□□□□□ -1.15
GYPB-204ENST00000504951 TTLL12Q14166 644 aaPredicted RBP7.86□□□□□ -1.15
GYPB-204ENST00000504951 UBE2Q1Q7Z7E8 422 aa7.86□□□□□ -1.15
GYPB-204ENST00000504951 FAM89AQ96GI7 184 aa7.86□□□□□ -1.15
GYPB-204ENST00000504951 WNK4Q96J92 1243 aa7.86□□□□□ -1.15
GYPB-204ENST00000504951 COA1Q9GZY4 146 aa7.86□□□□□ -1.15
GYPB-204ENST00000504951 ZCCHC17Q9NP64 241 aaKnown RBP7.86□□□□□ -1.15
GYPB-204ENST00000504951 ANKIB1Q9P2G1 1089 aa7.86□□□□□ -1.15
GYPB-204ENST00000504951 TSPYL4Q9UJ04 414 aa7.86□□□□□ -1.15
GYPB-204ENST00000504951 MED23Q9ULK4 1368 aa7.85□□□□□ -1.15
GYPB-204ENST00000504951 EIF2S2P20042 333 aaKnown RBP7.85□□□□□ -1.15
GYPB-204ENST00000504951 CRHR2Q13324 411 aa7.85□□□□□ -1.15
GYPB-204ENST00000504951 SUPT20HL1Q3ZLR7 823 aa7.85□□□□□ -1.15
GYPB-204ENST00000504951 CCDC152Q4G0S7 254 aa7.85□□□□□ -1.15
GYPB-204ENST00000504951 PRAMEF18Q5VWM3 479 aa7.85□□□□□ -1.15
GYPB-204ENST00000504951 NKX2-3Q8TAU0 364 aa7.85□□□□□ -1.15
GYPB-204ENST00000504951 CD99L2Q8TCZ2 262 aa7.85□□□□□ -1.15
GYPB-204ENST00000504951 PTPN18Q99952 460 aa7.85□□□□□ -1.15
GYPB-204ENST00000504951 DEFB129Q9H1M3 183 aa7.85□□□□□ -1.15
GYPB-204ENST00000504951 RBM27Q9P2N5 1060 aaKnown RBP7.85□□□□□ -1.15
GYPB-204ENST00000504951 ANGEL1Q9UNK9 670 aaKnown RBP7.85□□□□□ -1.15
GYPB-204ENST00000504951 A0A0C4DFX4 3053 aa7.85□□□□□ -1.15
GYPB-204ENST00000504951 RANBP2P49792 3224 aaKnown RBP7.85□□□□□ -1.15
GYPB-204ENST00000504951 CHL1O00533 1208 aa7.84□□□□□ -1.15
GYPB-204ENST00000504951 PDE8AO60658 829 aa7.84□□□□□ -1.15
GYPB-204ENST00000504951 SLC9C1Q4G0N8 1177 aa7.84□□□□□ -1.15
GYPB-204ENST00000504951 CCDC191Q8NCU4 936 aa7.84□□□□□ -1.15
GYPB-204ENST00000504951 HELBQ8NG08 1087 aaPredicted RBP7.84□□□□□ -1.15
GYPB-204ENST00000504951 BSDC1Q9NW68 430 aaPredicted RBP7.84□□□□□ -1.15
GYPB-204ENST00000504951 HYPKQ9NX55 129 aa7.84□□□□□ -1.15
GYPB-204ENST00000504951 DBF4Q9UBU7 674 aaPredicted RBP7.84□□□□□ -1.15
GYPB-204ENST00000504951 LEMD3Q9Y2U8 911 aa7.84□□□□□ -1.15
GYPB-204ENST00000504951 PCDHGA4Q9Y5G9 962 aa7.84□□□□□ -1.15
GYPB-204ENST00000504951 ZNF646O15015 1829 aaPredicted RBP7.84□□□□□ -1.15
GYPB-204ENST00000504951 ZNF804BA4D1E1 1349 aa7.83□□□□□ -1.16
GYPB-204ENST00000504951 ANXA1P04083 346 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms