RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 ANKRD2Q9GZV1 360 aa6.85□□□□□ -1.31
LINC02397-201ENST00000504409 DUX4Q9UBX2 424 aa6.85□□□□□ -1.31
LINC02397-201ENST00000504409 SART1O43290 800 aaKnown RBP6.85□□□□□ -1.31
LINC02397-201ENST00000504409 CETN1Q12798 172 aa6.85□□□□□ -1.31
LINC02397-201ENST00000504409 KDM5CP41229 1560 aa6.85□□□□□ -1.31
LINC02397-201ENST00000504409 CFAP74Q9C0B2 1584 aa6.85□□□□□ -1.31
LINC02397-201ENST00000504409 KIF1BO60333 1816 aa6.85□□□□□ -1.31
LINC02397-201ENST00000504409 FCHSD2O94868 740 aa6.85□□□□□ -1.31
LINC02397-201ENST00000504409 TRHP20396 242 aaPredicted RBP6.85□□□□□ -1.31
LINC02397-201ENST00000504409 GNG11P61952 73 aa6.85□□□□□ -1.31
LINC02397-201ENST00000504409 TPRNQ4KMQ1 711 aa6.85□□□□□ -1.31
LINC02397-201ENST00000504409 HVCN1Q96D96 273 aa6.85□□□□□ -1.31
LINC02397-201ENST00000504409 SYNJ2O15056 1496 aa6.85□□□□□ -1.31
LINC02397-201ENST00000504409 GAPVD1Q14C86 1478 aa6.85□□□□□ -1.31
LINC02397-201ENST00000504409 SSBP05455 408 aaKnown RBP eCLIP6.85□□□□□ -1.31
LINC02397-201ENST00000504409 MAN1A1P33908 653 aa6.85□□□□□ -1.31
LINC02397-201ENST00000504409 RAB3IL1Q8TBN0 382 aa6.85□□□□□ -1.31
LINC02397-201ENST00000504409 MAIP1Q8WWC4 291 aa6.85□□□□□ -1.31
LINC02397-201ENST00000504409 RILPL2Q969X0 211 aa6.85□□□□□ -1.31
LINC02397-201ENST00000504409 BCL2L12Q9HB09 334 aa6.85□□□□□ -1.31
LINC02397-201ENST00000504409 KRR1Q13601 381 aaKnown RBP6.85□□□□□ -1.31
LINC02397-201ENST00000504409 PPP1R2P3Q6NXS1 205 aa6.85□□□□□ -1.31
LINC02397-201ENST00000504409 SYCE1Q8N0S2 351 aa6.85□□□□□ -1.31
LINC02397-201ENST00000504409 CATSPER1Q8NEC5 780 aa6.85□□□□□ -1.31
LINC02397-201ENST00000504409 HOOK2Q96ED9 719 aa6.85□□□□□ -1.31
LINC02397-201ENST00000504409 TRAPPC8Q9Y2L5 1435 aa6.85□□□□□ -1.31
LINC02397-201ENST00000504409 CCDC178Q5BJE1 867 aa6.84□□□□□ -1.31
LINC02397-201ENST00000504409 KANK4Q5T7N3 995 aaPredicted RBP6.84□□□□□ -1.31
LINC02397-201ENST00000504409 GAS2L2Q8NHY3 880 aa6.84□□□□□ -1.31
LINC02397-201ENST00000504409 NAPGQ99747 312 aaPredicted RBP6.84□□□□□ -1.31
LINC02397-201ENST00000504409 SPZ1Q9BXG8 430 aa6.84□□□□□ -1.31
LINC02397-201ENST00000504409 DIABLOQ9NR28 239 aa6.84□□□□□ -1.31
LINC02397-201ENST00000504409 IKBKGQ9Y6K9 419 aa6.84□□□□□ -1.31
LINC02397-201ENST00000504409 RASGRF2O14827 1237 aa6.84□□□□□ -1.31
LINC02397-201ENST00000504409 NOP53Q9NZM5 478 aaKnown RBP6.84□□□□□ -1.31
LINC02397-201ENST00000504409 HACD3Q9P035 362 aa6.84□□□□□ -1.31
LINC02397-201ENST00000504409 ABCC1P33527 1531 aa6.84□□□□□ -1.31
LINC02397-201ENST00000504409 TARSL2A2RTX5 802 aaKnown RBP6.84□□□□□ -1.31
LINC02397-201ENST00000504409 ESRRBO95718 433 aa6.84□□□□□ -1.31
LINC02397-201ENST00000504409 TNIP1Q15025 636 aa6.84□□□□□ -1.31
LINC02397-201ENST00000504409 EMBQ6PCB8 327 aa6.84□□□□□ -1.31
LINC02397-201ENST00000504409 HAUS8Q9BT25 410 aa6.84□□□□□ -1.31
LINC02397-201ENST00000504409 PRDM10Q9NQV6 1147 aa6.84□□□□□ -1.31
LINC02397-201ENST00000504409 FNBP4Q8N3X1 1017 aaPredicted RBP6.84□□□□□ -1.31
LINC02397-201ENST00000504409 TMCO5AQ8N6Q1 288 aa6.84□□□□□ -1.31
LINC02397-201ENST00000504409 PDLIM2Q96JY6 352 aa6.84□□□□□ -1.31
LINC02397-201ENST00000504409 CFTRP13569 1480 aa6.84□□□□□ -1.31
LINC02397-201ENST00000504409 H0YC42 278 aa6.84□□□□□ -1.31
LINC02397-201ENST00000504409 PPP2R1AP30153 589 aa6.84□□□□□ -1.31
LINC02397-201ENST00000504409 TPD52P55327 224 aaPredicted RBP6.84□□□□□ -1.31
LINC02397-201ENST00000504409 VPS53Q5VIR6 699 aa6.84□□□□□ -1.31
LINC02397-201ENST00000504409 STXBP4Q6ZWJ1 553 aa6.84□□□□□ -1.31
LINC02397-201ENST00000504409 SESTD1Q86VW0 696 aa6.84□□□□□ -1.31
LINC02397-201ENST00000504409 CFAP61Q8NHU2 1237 aa6.84□□□□□ -1.31
LINC02397-201ENST00000504409 RAB17Q9H0T7 212 aa6.84□□□□□ -1.31
LINC02397-201ENST00000504409 TSPYL2Q9H2G4 693 aaPredicted RBP6.84□□□□□ -1.31
LINC02397-201ENST00000504409 PPCSQ9HAB8 311 aa6.84□□□□□ -1.31
LINC02397-201ENST00000504409 ZNF287Q9HBT7 754 aa6.84□□□□□ -1.31
LINC02397-201ENST00000504409 EXOC1Q9NV70 894 aa6.84□□□□□ -1.31
LINC02397-201ENST00000504409 HYPKQ9NX55 129 aa6.84□□□□□ -1.31
LINC02397-201ENST00000504409 TSPY2A6NKD2 308 aa6.84□□□□□ -1.31
LINC02397-201ENST00000504409 AREL1O15033 823 aa6.84□□□□□ -1.31
LINC02397-201ENST00000504409 TSPY3P0CV98 308 aa6.84□□□□□ -1.31
LINC02397-201ENST00000504409 TSPY8P0CW00 308 aa6.84□□□□□ -1.31
LINC02397-201ENST00000504409 HARSP12081 509 aaKnown RBP6.84□□□□□ -1.31
LINC02397-201ENST00000504409 SLC4A3P48751 1232 aa6.84□□□□□ -1.31
LINC02397-201ENST00000504409 MRPS35P82673 323 aaKnown RBP6.84□□□□□ -1.31
LINC02397-201ENST00000504409 TSPY1Q01534 308 aa6.84□□□□□ -1.31
LINC02397-201ENST00000504409 CYP26C1Q6V0L0 522 aa6.84□□□□□ -1.31
LINC02397-201ENST00000504409 NUTM2GQ5VZR2 741 aa6.84□□□□□ -1.32
LINC02397-201ENST00000504409 GGA2Q9UJY4 613 aa6.84□□□□□ -1.32
LINC02397-201ENST00000504409 HSPA8P11142 646 aaKnown RBP6.84□□□□□ -1.32
LINC02397-201ENST00000504409 BIRC3Q13489 604 aa6.84□□□□□ -1.32
LINC02397-201ENST00000504409 CCDC62Q6P9F0 684 aa6.84□□□□□ -1.32
LINC02397-201ENST00000504409 INTS8Q75QN2 995 aaKnown RBP6.84□□□□□ -1.32
LINC02397-201ENST00000504409 ADRM1Q16186 407 aa6.83□□□□□ -1.32
LINC02397-201ENST00000504409 IFT81Q8WYA0 676 aa6.83□□□□□ -1.32
LINC02397-201ENST00000504409 SASH1O94885 1247 aa6.83□□□□□ -1.32
LINC02397-201ENST00000504409 GABPB2Q8TAK5 448 aaPredicted RBP6.83□□□□□ -1.32
LINC02397-201ENST00000504409 LEO1Q8WVC0 666 aaPredicted RBP6.83□□□□□ -1.32
LINC02397-201ENST00000504409 TSC22D3Q99576 134 aa6.83□□□□□ -1.32
LINC02397-201ENST00000504409 TROQ12816 1431 aaPredicted RBP6.83□□□□□ -1.32
LINC02397-201ENST00000504409 ALDH1L1O75891 902 aa6.83□□□□□ -1.32
LINC02397-201ENST00000504409 FSD1Q9BTV5 496 aa6.83□□□□□ -1.32
LINC02397-201ENST00000504409 RRAGDQ9NQL2 400 aaPredicted RBP6.83□□□□□ -1.32
LINC02397-201ENST00000504409 DUOX2Q9NRD8 1548 aa6.83□□□□□ -1.32
LINC02397-201ENST00000504409 UBTFL1P0CB47 393 aaPredicted RBP6.83□□□□□ -1.32
LINC02397-201ENST00000504409 NOP14P78316 857 aaKnown RBP6.83□□□□□ -1.32
LINC02397-201ENST00000504409 INAQ16352 499 aa6.83□□□□□ -1.32
LINC02397-201ENST00000504409 NBPF14Q5TI25 921 aa6.83□□□□□ -1.32
LINC02397-201ENST00000504409 CCDC43Q96MW1 224 aaKnown RBP6.83□□□□□ -1.32
LINC02397-201ENST00000504409 MRPL40Q9NQ50 206 aaKnown RBP6.83□□□□□ -1.32
LINC02397-201ENST00000504409 TRAK1Q9UPV9 953 aa6.83□□□□□ -1.32
LINC02397-201ENST00000504409 ABCA10Q8WWZ4 1543 aa6.83□□□□□ -1.32
LINC02397-201ENST00000504409 KIAA1210Q9ULL0 1709 aa6.83□□□□□ -1.32
LINC02397-201ENST00000504409 FERP16591 822 aa6.83□□□□□ -1.32
LINC02397-201ENST00000504409 OAS2P29728 719 aaKnown RBP6.83□□□□□ -1.32
LINC02397-201ENST00000504409 MXRA7P84157 204 aa6.83□□□□□ -1.32
LINC02397-201ENST00000504409 NR1H3Q13133 447 aa6.83□□□□□ -1.32
LINC02397-201ENST00000504409 NEUROD2Q15784 382 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms