RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 DHX16O60231 1041 aaKnown RBP8.8□□□□□ -1
NEDD9-208ENST00000504387 CCDC93Q567U6 631 aa8.8□□□□□ -1
NEDD9-208ENST00000504387 LEKR1Q6ZMV7 388 aa8.8□□□□□ -1
NEDD9-208ENST00000504387 SYNE3Q6ZMZ3 975 aa8.8□□□□□ -1
NEDD9-208ENST00000504387 ERC1Q8IUD2 1116 aa8.8□□□□□ -1
NEDD9-208ENST00000504387 POLD4Q9HCU8 107 aa8.8□□□□□ -1
NEDD9-208ENST00000504387 RCOR1Q9UKL0 485 aa8.8□□□□□ -1
NEDD9-208ENST00000504387 FAN1Q9Y2M0 1017 aa8.8□□□□□ -1
NEDD9-208ENST00000504387 PARP3Q9Y6F1 533 aa8.8□□□□□ -1
NEDD9-208ENST00000504387 ZMYND10O75800 440 aa8.8□□□□□ -1
NEDD9-208ENST00000504387 NEXNQ0ZGT2 675 aa8.8□□□□□ -1
NEDD9-208ENST00000504387 LONRF2Q1L5Z9 754 aa8.8□□□□□ -1
NEDD9-208ENST00000504387 TRIM65Q6PJ69 517 aa8.8□□□□□ -1
NEDD9-208ENST00000504387 REXO1L1PQ8IX06 675 aa8.8□□□□□ -1
NEDD9-208ENST00000504387 AK7Q96M32 723 aa8.8□□□□□ -1
NEDD9-208ENST00000504387 ZNF396Q96N95 335 aaPredicted RBP8.8□□□□□ -1
NEDD9-208ENST00000504387 DBNDD2Q9BQY9 259 aa8.8□□□□□ -1
NEDD9-208ENST00000504387 ZSCAN16Q9H4T2 348 aaPredicted RBP8.8□□□□□ -1
NEDD9-208ENST00000504387 CTAGE5O15320 804 aa8.79□□□□□ -1
NEDD9-208ENST00000504387 TIMM10P62072 90 aa8.79□□□□□ -1
NEDD9-208ENST00000504387 TFCP2Q12800 502 aa8.79□□□□□ -1
NEDD9-208ENST00000504387 DHX8Q14562 1220 aaKnown RBP8.79□□□□□ -1
NEDD9-208ENST00000504387 ILDR1Q86SU0 546 aaPredicted RBP8.79□□□□□ -1
NEDD9-208ENST00000504387 GPIHBP1Q8IV16 184 aa8.79□□□□□ -1
NEDD9-208ENST00000504387 GRAMD1CQ8IYS0 662 aa8.79□□□□□ -1
NEDD9-208ENST00000504387 FMR1NBQ8N0W7 255 aaPredicted RBP8.79□□□□□ -1
NEDD9-208ENST00000504387 CCDC150Q8NCX0 1101 aa8.79□□□□□ -1
NEDD9-208ENST00000504387 ENGASEQ8NFI3 743 aa8.79□□□□□ -1
NEDD9-208ENST00000504387 PPP2R2CQ9Y2T4 447 aa8.79□□□□□ -1
NEDD9-208ENST00000504387 PLEKHG3A1L390 1219 aa8.79□□□□□ -1
NEDD9-208ENST00000504387 KIF2AO00139 706 aaPredicted RBP8.79□□□□□ -1
NEDD9-208ENST00000504387 STX17P56962 302 aa8.79□□□□□ -1
NEDD9-208ENST00000504387 PLEKHO1Q53GL0 409 aaPredicted RBP8.79□□□□□ -1
NEDD9-208ENST00000504387 EPHA10Q5JZY3 1008 aa8.79□□□□□ -1
NEDD9-208ENST00000504387 PHF8Q9UPP1 1060 aa8.79□□□□□ -1
NEDD9-208ENST00000504387 RIMS1Q86UR5 1692 aaKnown RBP8.79□□□□□ -1
NEDD9-208ENST00000504387 MAP3K5Q99683 1374 aa8.79□□□□□ -1
NEDD9-208ENST00000504387 UBE2Q2LH0YL09 131 aa8.78□□□□□ -1
NEDD9-208ENST00000504387 CPLX1O14810 134 aa8.78□□□□□ -1
NEDD9-208ENST00000504387 SPTLC2O15270 562 aa8.78□□□□□ -1
NEDD9-208ENST00000504387 EIF4A1P60842 406 aaKnown RBP8.78□□□□□ -1
NEDD9-208ENST00000504387 LRRFIP1Q32MZ4 808 aaKnown RBP8.78□□□□□ -1
NEDD9-208ENST00000504387 TTC19Q6DKK2 380 aaPredicted RBP8.78□□□□□ -1
NEDD9-208ENST00000504387 RGS22Q8NE09 1264 aa8.78□□□□□ -1
NEDD9-208ENST00000504387 C8orf76Q96K31 380 aa8.78□□□□□ -1
NEDD9-208ENST00000504387 COL15A1P39059 1388 aa8.78□□□□□ -1
NEDD9-208ENST00000504387 VWA3AA6NCI4 1184 aa8.78□□□□□ -1
NEDD9-208ENST00000504387 PFKFB1P16118 471 aa8.78□□□□□ -1
NEDD9-208ENST00000504387 MRPS25P82663 173 aaKnown RBP8.78□□□□□ -1
NEDD9-208ENST00000504387 DNAJC21Q5F1R6 531 aaKnown RBP8.78□□□□□ -1
NEDD9-208ENST00000504387 UBE3BQ7Z3V4 1068 aa8.78□□□□□ -1
NEDD9-208ENST00000504387 RIN2Q8WYP3 895 aaPredicted RBP8.78□□□□□ -1
NEDD9-208ENST00000504387 DDX17Q92841 729 aaKnown RBP8.78□□□□□ -1
NEDD9-208ENST00000504387 OSBPL5Q9H0X9 879 aaPredicted RBP8.78□□□□□ -1
NEDD9-208ENST00000504387 DBF4Q9UBU7 674 aaPredicted RBP8.78□□□□□ -1
NEDD9-208ENST00000504387 SOWAHDA6NJG2 315 aa8.78□□□□□ -1
NEDD9-208ENST00000504387 FKBP4Q02790 459 aaKnown RBP eCLIP8.78□□□□□ -1
NEDD9-208ENST00000504387 EP400NLQ6ZTU2 488 aa8.78□□□□□ -1
NEDD9-208ENST00000504387 BAG1Q99933 345 aaPredicted RBP8.78□□□□□ -1
NEDD9-208ENST00000504387 DBNLQ9UJU6 430 aaKnown RBP8.78□□□□□ -1
NEDD9-208ENST00000504387 EFCAB8A8MWE9 144 aa8.77□□□□□ -1.01
NEDD9-208ENST00000504387 WDHD1O75717 1129 aaPredicted RBP8.77□□□□□ -1.01
NEDD9-208ENST00000504387 ABL1P00519 1130 aa8.77□□□□□ -1.01
NEDD9-208ENST00000504387 KIF4BQ2VIQ3 1234 aa8.77□□□□□ -1.01
NEDD9-208ENST00000504387 COPS6Q7L5N1 327 aa8.77□□□□□ -1.01
NEDD9-208ENST00000504387 SRLQ86TD4 932 aa8.77□□□□□ -1.01
NEDD9-208ENST00000504387 CABLES1Q8TDN4 633 aa8.77□□□□□ -1.01
NEDD9-208ENST00000504387 FUT8Q9BYC5 575 aa8.77□□□□□ -1.01
NEDD9-208ENST00000504387 DENND2AQ9ULE3 1009 aa8.77□□□□□ -1.01
NEDD9-208ENST00000504387 SBNO1A3KN83 1393 aa8.77□□□□□ -1.01
NEDD9-208ENST00000504387 USP6P35125 1406 aa8.77□□□□□ -1.01
NEDD9-208ENST00000504387 PSDA5PKW4 1024 aaPredicted RBP8.77□□□□□ -1.01
NEDD9-208ENST00000504387 DDX58O95786 925 aaKnown RBP8.77□□□□□ -1.01
NEDD9-208ENST00000504387 CDC27P30260 824 aa8.77□□□□□ -1.01
NEDD9-208ENST00000504387 SYKP43405 635 aa8.77□□□□□ -1.01
NEDD9-208ENST00000504387 AKAP17AQ02040 695 aaKnown RBP8.77□□□□□ -1.01
NEDD9-208ENST00000504387 NCAPHQ15003 741 aa8.77□□□□□ -1.01
NEDD9-208ENST00000504387 CHRNA2Q15822 529 aa8.77□□□□□ -1.01
NEDD9-208ENST00000504387 WASHC4Q2M389 1173 aa8.77□□□□□ -1.01
NEDD9-208ENST00000504387 JAKMIP3Q5VZ66 844 aa8.77□□□□□ -1.01
NEDD9-208ENST00000504387 PACS2Q86VP3 889 aa8.77□□□□□ -1.01
NEDD9-208ENST00000504387 KLHL34Q8N239 644 aa8.77□□□□□ -1.01
NEDD9-208ENST00000504387 IL17RAQ96F46 866 aa8.77□□□□□ -1.01
NEDD9-208ENST00000504387 KAZALD1Q96I82 304 aa8.77□□□□□ -1.01
NEDD9-208ENST00000504387 ORAI2Q96SN7 254 aa8.77□□□□□ -1.01
NEDD9-208ENST00000504387 MYL10Q9BUA6 226 aa8.77□□□□□ -1.01
NEDD9-208ENST00000504387 CWC15Q9P013 229 aaKnown RBP8.77□□□□□ -1.01
NEDD9-208ENST00000504387 KIF28PB7ZC32 967 aa8.76□□□□□ -1.01
NEDD9-208ENST00000504387 CAVIN2O95810 425 aa8.76□□□□□ -1.01
NEDD9-208ENST00000504387 CASP1P29466 404 aa8.76□□□□□ -1.01
NEDD9-208ENST00000504387 PDE4BQ07343 736 aa8.76□□□□□ -1.01
NEDD9-208ENST00000504387 ZNF569Q5MCW4 686 aa8.76□□□□□ -1.01
NEDD9-208ENST00000504387 TTC5Q8N0Z6 440 aa8.76□□□□□ -1.01
NEDD9-208ENST00000504387 XAGE3Q8WTP9 111 aa8.76□□□□□ -1.01
NEDD9-208ENST00000504387 PHKBQ93100 1093 aa8.76□□□□□ -1.01
NEDD9-208ENST00000504387 ABCB6Q9NP58 842 aa8.76□□□□□ -1.01
NEDD9-208ENST00000504387 TMEM2Q9UHN6 1383 aa8.76□□□□□ -1.01
NEDD9-208ENST00000504387 IGSF1Q8N6C5 1336 aa8.76□□□□□ -1.01
NEDD9-208ENST00000504387 GRM8O00222 908 aa8.76□□□□□ -1.01
NEDD9-208ENST00000504387 PES1O00541 588 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 160.2 ms