RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 TRIM37O94972 964 aa7.07□□□□□ -1.28
CLCN3-204ENST00000504131 REC8O95072 547 aa7.07□□□□□ -1.28
CLCN3-204ENST00000504131 MYZAPP0CAP1 466 aa7.07□□□□□ -1.28
CLCN3-204ENST00000504131 MCM2P49736 904 aa7.07□□□□□ -1.28
CLCN3-204ENST00000504131 IFT88Q13099 833 aa7.07□□□□□ -1.28
CLCN3-204ENST00000504131 TTC39AQ5SRH9 613 aa7.07□□□□□ -1.28
CLCN3-204ENST00000504131 MAATS1Q7Z4T9 603 aa7.07□□□□□ -1.28
CLCN3-204ENST00000504131 PHLDB2Q86SQ0 1253 aa7.07□□□□□ -1.28
CLCN3-204ENST00000504131 HS6ST3Q8IZP7 471 aa7.07□□□□□ -1.28
CLCN3-204ENST00000504131 FNBP4Q8N3X1 1017 aaPredicted RBP7.07□□□□□ -1.28
CLCN3-204ENST00000504131 PRPF31Q8WWY3 499 aaKnown RBP7.07□□□□□ -1.28
CLCN3-204ENST00000504131 DAAM1Q9Y4D1 1078 aa7.07□□□□□ -1.28
CLCN3-204ENST00000504131 KAT6BQ8WYB5 2073 aa7.07□□□□□ -1.28
CLCN3-204ENST00000504131 BICDL2A1A5D9 508 aa7.07□□□□□ -1.28
CLCN3-204ENST00000504131 TRIM64A6NGJ6 449 aa7.07□□□□□ -1.28
CLCN3-204ENST00000504131 TRIM64BA6NI03 449 aa7.07□□□□□ -1.28
CLCN3-204ENST00000504131 NDUFAB1O14561 156 aa7.07□□□□□ -1.28
CLCN3-204ENST00000504131 TRAPPC10P48553 1259 aa7.07□□□□□ -1.28
CLCN3-204ENST00000504131 NLRP5P59047 1200 aa7.07□□□□□ -1.28
CLCN3-204ENST00000504131 POTEEQ6S8J3 1075 aa7.07□□□□□ -1.28
CLCN3-204ENST00000504131 MCM10Q7L590 875 aa7.07□□□□□ -1.28
CLCN3-204ENST00000504131 SIRT1Q96EB6 747 aa7.07□□□□□ -1.28
CLCN3-204ENST00000504131 NDEL1Q9GZM8 345 aa7.07□□□□□ -1.28
CLCN3-204ENST00000504131 VCPKMTQ9H867 229 aa7.07□□□□□ -1.28
CLCN3-204ENST00000504131 TSNARE1Q96NA8 513 aa7.07□□□□□ -1.28
CLCN3-204ENST00000504131 BCL2L12Q9HB09 334 aa7.07□□□□□ -1.28
CLCN3-204ENST00000504131 ITGB1BP2Q9UKP3 347 aa7.07□□□□□ -1.28
CLCN3-204ENST00000504131 SSX2IPQ9Y2D8 614 aa7.07□□□□□ -1.28
CLCN3-204ENST00000504131 ATP8A1Q9Y2Q0 1164 aa7.07□□□□□ -1.28
CLCN3-204ENST00000504131 DNAJA1P31689 397 aaKnown RBP7.06□□□□□ -1.28
CLCN3-204ENST00000504131 FAM69CQ0P6D2 419 aa7.06□□□□□ -1.28
CLCN3-204ENST00000504131 NEK10Q6ZWH5 1172 aa7.06□□□□□ -1.28
CLCN3-204ENST00000504131 CDC37L1Q7L3B6 337 aa7.06□□□□□ -1.28
CLCN3-204ENST00000504131 PPP1R14CQ8TAE6 165 aa7.06□□□□□ -1.28
CLCN3-204ENST00000504131 CTAGE1Q96RT6 745 aa7.06□□□□□ -1.28
CLCN3-204ENST00000504131 TRAK1Q9UPV9 953 aa7.06□□□□□ -1.28
CLCN3-204ENST00000504131 KIF21AQ7Z4S6 1674 aa7.06□□□□□ -1.28
CLCN3-204ENST00000504131 LDHAP00338 332 aaKnown RBP7.06□□□□□ -1.28
CLCN3-204ENST00000504131 YY1P25490 414 aa7.06□□□□□ -1.28
CLCN3-204ENST00000504131 CUL3Q13618 768 aa7.06□□□□□ -1.28
CLCN3-204ENST00000504131 METTL24Q5JXM2 366 aa7.06□□□□□ -1.28
CLCN3-204ENST00000504131 ARHGAP22Q7Z5H3 698 aa7.06□□□□□ -1.28
CLCN3-204ENST00000504131 PARP9Q8IXQ6 854 aa7.06□□□□□ -1.28
CLCN3-204ENST00000504131 ARHGAP18Q8N392 663 aa7.06□□□□□ -1.28
CLCN3-204ENST00000504131 CEP70Q8NHQ1 597 aa7.06□□□□□ -1.28
CLCN3-204ENST00000504131 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.06□□□□□ -1.28
CLCN3-204ENST00000504131 AATFQ9NY61 560 aaKnown RBP eCLIP7.06□□□□□ -1.28
CLCN3-204ENST00000504131 SPATA7Q9P0W8 599 aa7.06□□□□□ -1.28
CLCN3-204ENST00000504131 MTRF1LQ9UGC7 380 aaKnown RBP7.06□□□□□ -1.28
CLCN3-204ENST00000504131 MKRN1Q9UHC7 482 aaKnown RBP7.06□□□□□ -1.28
CLCN3-204ENST00000504131 FAF1Q9UNN5 650 aaPredicted RBP7.06□□□□□ -1.28
CLCN3-204ENST00000504131 DDHD2O94830 711 aa7.06□□□□□ -1.28
CLCN3-204ENST00000504131 MYBL2P10244 700 aa7.06□□□□□ -1.28
CLCN3-204ENST00000504131 KRT13P13646 458 aa7.06□□□□□ -1.28
CLCN3-204ENST00000504131 OAS2P29728 719 aaKnown RBP7.06□□□□□ -1.28
CLCN3-204ENST00000504131 KRT20P35900 424 aa7.06□□□□□ -1.28
CLCN3-204ENST00000504131 TUBA3CQ13748 450 aa7.06□□□□□ -1.28
CLCN3-204ENST00000504131 KCTD2Q14681 263 aa7.06□□□□□ -1.28
CLCN3-204ENST00000504131 HSP90AA4PQ58FG1 418 aa7.06□□□□□ -1.28
CLCN3-204ENST00000504131 NUDCQ9Y266 331 aa7.06□□□□□ -1.28
CLCN3-204ENST00000504131 CGNL1Q0VF96 1302 aa7.06□□□□□ -1.28
CLCN3-204ENST00000504131 GRIN2BQ13224 1484 aa7.06□□□□□ -1.28
CLCN3-204ENST00000504131 KIF21BO75037 1637 aa7.06□□□□□ -1.28
CLCN3-204ENST00000504131 LRRD1A4D1F6 860 aa7.06□□□□□ -1.28
CLCN3-204ENST00000504131 HSPA1LP34931 641 aa7.06□□□□□ -1.28
CLCN3-204ENST00000504131 DAB2P98082 770 aa7.06□□□□□ -1.28
CLCN3-204ENST00000504131 CEP85LQ5SZL2 805 aa7.06□□□□□ -1.28
CLCN3-204ENST00000504131 MYOCDQ8IZQ8 938 aa7.06□□□□□ -1.28
CLCN3-204ENST00000504131 DACT3Q96B18 629 aaPredicted RBP7.06□□□□□ -1.28
CLCN3-204ENST00000504131 ZNF330Q9Y3S2 320 aaPredicted RBP7.06□□□□□ -1.28
CLCN3-204ENST00000504131 SNX5Q9Y5X3 404 aa7.06□□□□□ -1.28
CLCN3-204ENST00000504131 MCM3P25205 808 aa7.06□□□□□ -1.28
CLCN3-204ENST00000504131 VPS41P49754 854 aa7.06□□□□□ -1.28
CLCN3-204ENST00000504131 MIER3Q7Z3K6 550 aa7.06□□□□□ -1.28
CLCN3-204ENST00000504131 CENPTQ96BT3 561 aa7.06□□□□□ -1.28
CLCN3-204ENST00000504131 PDRG1Q9NUG6 133 aa7.06□□□□□ -1.28
CLCN3-204ENST00000504131 NLRP2Q9NX02 1062 aa7.06□□□□□ -1.28
CLCN3-204ENST00000504131 MIS18AQ9NYP9 233 aa7.06□□□□□ -1.28
CLCN3-204ENST00000504131 IMPDH2P12268 514 aa7.05□□□□□ -1.28
CLCN3-204ENST00000504131 SKILP12757 684 aa7.05□□□□□ -1.28
CLCN3-204ENST00000504131 CCDC57Q2TAC2 916 aa7.05□□□□□ -1.28
CLCN3-204ENST00000504131 NLRP4Q96MN2 994 aa7.05□□□□□ -1.28
CLCN3-204ENST00000504131 NR1H4Q96RI1 486 aaPredicted RBP7.05□□□□□ -1.28
CLCN3-204ENST00000504131 KIAA1468Q9P260 1216 aa7.05□□□□□ -1.28
CLCN3-204ENST00000504131 USO1O60763 962 aaKnown RBP7.05□□□□□ -1.28
CLCN3-204ENST00000504131 LDHCP07864 332 aa7.05□□□□□ -1.28
CLCN3-204ENST00000504131 BDNFP23560 247 aa7.05□□□□□ -1.28
CLCN3-204ENST00000504131 GUCY1B3Q02153 619 aa7.05□□□□□ -1.28
CLCN3-204ENST00000504131 VCX3AQ9NNX9 186 aa7.05□□□□□ -1.28
CLCN3-204ENST00000504131 VIL1P09327 827 aaKnown RBP7.05□□□□□ -1.28
CLCN3-204ENST00000504131 SLC7A5Q01650 507 aa7.05□□□□□ -1.28
CLCN3-204ENST00000504131 FXNQ16595 210 aa7.05□□□□□ -1.28
CLCN3-204ENST00000504131 CCDC93Q567U6 631 aa7.05□□□□□ -1.28
CLCN3-204ENST00000504131 TSC1Q92574 1164 aa7.05□□□□□ -1.28
CLCN3-204ENST00000504131 ARHGEF2Q92974 986 aaKnown RBP7.05□□□□□ -1.28
CLCN3-204ENST00000504131 VCXQ9H320 206 aa7.05□□□□□ -1.28
CLCN3-204ENST00000504131 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.05□□□□□ -1.28
CLCN3-204ENST00000504131 WDR62O43379 1518 aa7.05□□□□□ -1.28
CLCN3-204ENST00000504131 RAD54L2Q9Y4B4 1467 aa7.05□□□□□ -1.28
CLCN3-204ENST00000504131 ROCK2O75116 1388 aaKnown RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 143.1 ms