RNA–Protein interactions for RNA: ENST00000503842.5

PRDM2-213, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-213ENST00000503842 UFL1O94874 794 aa16.28■□□□□ 0.2
PRDM2-213ENST00000503842 GSPT1P15170 499 aaKnown RBP16.28■□□□□ 0.2
PRDM2-213ENST00000503842 ATP5JP18859 108 aa16.28■□□□□ 0.2
PRDM2-213ENST00000503842 KLRK1P26718 216 aa16.28■□□□□ 0.2
PRDM2-213ENST00000503842 MPNDQ8N594 471 aa16.28■□□□□ 0.2
PRDM2-213ENST00000503842 NLGN2Q8NFZ4 835 aa16.28■□□□□ 0.2
PRDM2-213ENST00000503842 TBC1D16Q8TBP0 767 aa16.28■□□□□ 0.2
PRDM2-213ENST00000503842 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.28■□□□□ 0.2
PRDM2-213ENST00000503842 POLLQ9UGP5 575 aa16.28■□□□□ 0.2
PRDM2-213ENST00000503842 PHKA1P46020 1223 aa16.27■□□□□ 0.2
PRDM2-213ENST00000503842 DALRD3Q5D0E6 543 aaKnown RBP16.27■□□□□ 0.2
PRDM2-213ENST00000503842 BMP2KLQ5H9B9 411 aa16.27■□□□□ 0.2
PRDM2-213ENST00000503842 GORABQ5T7V8 394 aa16.27■□□□□ 0.2
PRDM2-213ENST00000503842 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.27■□□□□ 0.2
PRDM2-213ENST00000503842 ZNF512BQ96KM6 892 aaPredicted RBP16.27■□□□□ 0.2
PRDM2-213ENST00000503842 FHDC1Q9C0D6 1143 aaPredicted RBP16.27■□□□□ 0.2
PRDM2-213ENST00000503842 TMX4Q9H1E5 349 aaPredicted RBP16.27■□□□□ 0.2
PRDM2-213ENST00000503842 ARID4AP29374 1257 aaPredicted RBP16.26■□□□□ 0.19
PRDM2-213ENST00000503842 GRIPAP1Q4V328 841 aa16.26■□□□□ 0.19
PRDM2-213ENST00000503842 CCDC158Q5M9N0 1113 aa16.26■□□□□ 0.19
PRDM2-213ENST00000503842 CCDC102BQ68D86 513 aa16.26■□□□□ 0.19
PRDM2-213ENST00000503842 DPP8Q6V1X1 898 aaPredicted RBP16.26■□□□□ 0.19
PRDM2-213ENST00000503842 FBXO33Q7Z6M2 555 aa16.26■□□□□ 0.19
PRDM2-213ENST00000503842 EFCAB3Q8N7B9 438 aa16.26■□□□□ 0.19
PRDM2-213ENST00000503842 BBXQ8WY36 941 aaPredicted RBP16.26■□□□□ 0.19
PRDM2-213ENST00000503842 FAM84BQ96KN1 310 aaPredicted RBP16.26■□□□□ 0.19
PRDM2-213ENST00000503842 RTFDC1Q9BY42 306 aaPredicted RBP16.26■□□□□ 0.19
PRDM2-213ENST00000503842 MED23Q9ULK4 1368 aa16.26■□□□□ 0.19
PRDM2-213ENST00000503842 C21orf2O43822 256 aa16.25■□□□□ 0.19
PRDM2-213ENST00000503842 GYG1P46976 350 aa16.25■□□□□ 0.19
PRDM2-213ENST00000503842 BCAMP50895 628 aa16.25■□□□□ 0.19
PRDM2-213ENST00000503842 CCDC93Q567U6 631 aa16.25■□□□□ 0.19
PRDM2-213ENST00000503842 TTC39AQ5SRH9 613 aa16.25■□□□□ 0.19
PRDM2-213ENST00000503842 TXNRD3Q86VQ6 643 aa16.25■□□□□ 0.19
PRDM2-213ENST00000503842 GPR101Q96P66 508 aaPredicted RBP16.25■□□□□ 0.19
PRDM2-213ENST00000503842 BOLA2Q9H3K6 86 aa16.25■□□□□ 0.19
PRDM2-213ENST00000503842 AKAP11Q9UKA4 1901 aa16.24■□□□□ 0.19
PRDM2-213ENST00000503842 C6orf229H3BNL8 230 aa16.24■□□□□ 0.19
PRDM2-213ENST00000503842 UQCRFS1P1P0C7P4 283 aa16.24■□□□□ 0.19
PRDM2-213ENST00000503842 SOGA3Q5TF21 947 aa16.24■□□□□ 0.19
PRDM2-213ENST00000503842 HAUS7Q99871 368 aa16.24■□□□□ 0.19
PRDM2-213ENST00000503842 SDSP20132 328 aa16.23■□□□□ 0.19
PRDM2-213ENST00000503842 HIBADHP31937 336 aaKnown RBP16.23■□□□□ 0.19
PRDM2-213ENST00000503842 MCAMP43121 646 aa16.23■□□□□ 0.19
PRDM2-213ENST00000503842 SCARF1Q14162 830 aa16.23■□□□□ 0.19
PRDM2-213ENST00000503842 CAVIN4Q5BKX8 364 aa16.23■□□□□ 0.19
PRDM2-213ENST00000503842 RTKN2Q8IZC4 609 aa16.23■□□□□ 0.19
PRDM2-213ENST00000503842 ARFGEF1Q9Y6D6 1849 aa16.22■□□□□ 0.19
PRDM2-213ENST00000503842 EYA3Q99504 573 aa16.22■□□□□ 0.19
PRDM2-213ENST00000503842 SYT17Q9BSW7 474 aa16.22■□□□□ 0.19
PRDM2-213ENST00000503842 GNL3LQ9NVN8 582 aaKnown RBP16.22■□□□□ 0.19
PRDM2-213ENST00000503842 RASGRF1Q13972 1273 aa16.21■□□□□ 0.19
PRDM2-213ENST00000503842 ZNF804AQ7Z570 1209 aa16.21■□□□□ 0.19
PRDM2-213ENST00000503842 SUPT20HQ8NEM7 779 aa16.21■□□□□ 0.19
PRDM2-213ENST00000503842 PSMD1Q99460 953 aa16.21■□□□□ 0.19
PRDM2-213ENST00000503842 HMG20BQ9P0W2 317 aa16.21■□□□□ 0.19
PRDM2-213ENST00000503842 WWC3Q9ULE0 1092 aa16.21■□□□□ 0.19
PRDM2-213ENST00000503842 BCS1LQ9Y276 419 aa16.21■□□□□ 0.19
PRDM2-213ENST00000503842 COL1A1P02452 1464 aaPredicted RBP16.21■□□□□ 0.19
PRDM2-213ENST00000503842 SEMA3EO15041 775 aa16.2■□□□□ 0.18
PRDM2-213ENST00000503842 MAP4K4O95819 1239 aaPredicted RBP16.2■□□□□ 0.18
PRDM2-213ENST00000503842 POTEIP0CG38 1075 aa16.2■□□□□ 0.18
PRDM2-213ENST00000503842 PI16Q6UXB8 463 aa16.2■□□□□ 0.18
PRDM2-213ENST00000503842 VPS37DQ86XT2 251 aa16.2■□□□□ 0.18
PRDM2-213ENST00000503842 CNTROBQ8N137 903 aa16.2■□□□□ 0.18
PRDM2-213ENST00000503842 TDRD7Q8NHU6 1098 aaKnown RBP16.2■□□□□ 0.18
PRDM2-213ENST00000503842 EVI5LQ96CN4 794 aa16.2■□□□□ 0.18
PRDM2-213ENST00000503842 DNAJC2Q99543 621 aaKnown RBP16.2■□□□□ 0.18
PRDM2-213ENST00000503842 NDUFB9Q9Y6M9 179 aa16.2■□□□□ 0.18
PRDM2-213ENST00000503842 FER1L6Q2WGJ9 1857 aa16.2■□□□□ 0.18
PRDM2-213ENST00000503842 PDS5AQ29RF7 1337 aaKnown RBP16.19■□□□□ 0.18
PRDM2-213ENST00000503842 TRIM6-TRIM34B2RNG4 842 aa16.19■□□□□ 0.18
PRDM2-213ENST00000503842 IL1R1P14778 569 aa16.19■□□□□ 0.18
PRDM2-213ENST00000503842 ZAP70P43403 619 aa16.19■□□□□ 0.18
PRDM2-213ENST00000503842 FKBP4Q02790 459 aaKnown RBP eCLIP16.19■□□□□ 0.18
PRDM2-213ENST00000503842 WASHC4Q2M389 1173 aa16.19■□□□□ 0.18
PRDM2-213ENST00000503842 SPATA5Q8NB90 893 aa16.19■□□□□ 0.18
PRDM2-213ENST00000503842 EDC3Q96F86 508 aaKnown RBP16.19■□□□□ 0.18
PRDM2-213ENST00000503842 ZC3H12CQ9C0D7 883 aaKnown RBP16.19■□□□□ 0.18
PRDM2-213ENST00000503842 CD209Q9NNX6 404 aa16.19■□□□□ 0.18
PRDM2-213ENST00000503842 SNRKQ9NRH2 765 aa16.19■□□□□ 0.18
PRDM2-213ENST00000503842 PAG1Q9NWQ8 432 aa16.19■□□□□ 0.18
PRDM2-213ENST00000503842 DENND2AQ9ULE3 1009 aa16.19■□□□□ 0.18
PRDM2-213ENST00000503842 AK9Q5TCS8 1911 aa16.18■□□□□ 0.18
PRDM2-213ENST00000503842 GOLIM4O00461 696 aa16.18■□□□□ 0.18
PRDM2-213ENST00000503842 RIMBP2O15034 1052 aa16.18■□□□□ 0.18
PRDM2-213ENST00000503842 KIAA2012Q0VF49 1180 aa16.18■□□□□ 0.18
PRDM2-213ENST00000503842 SLC39A7Q92504 469 aa16.18■□□□□ 0.18
PRDM2-213ENST00000503842 RILPL2Q969X0 211 aa16.18■□□□□ 0.18
PRDM2-213ENST00000503842 COA1Q9GZY4 146 aa16.18■□□□□ 0.18
PRDM2-213ENST00000503842 IQSEC3Q9UPP2 1182 aaPredicted RBP16.18■□□□□ 0.18
PRDM2-213ENST00000503842 NFKBIEO00221 500 aa16.17■□□□□ 0.18
PRDM2-213ENST00000503842 SEC24BO95487 1268 aa16.17■□□□□ 0.18
PRDM2-213ENST00000503842 CYP2E1P05181 493 aaPredicted RBP16.17■□□□□ 0.18
PRDM2-213ENST00000503842 C8orf34Q49A92 452 aa16.17■□□□□ 0.18
PRDM2-213ENST00000503842 PELP1Q8IZL8 1130 aaKnown RBP16.17■□□□□ 0.18
PRDM2-213ENST00000503842 KBTBD3Q8NAB2 608 aa16.17■□□□□ 0.18
PRDM2-213ENST00000503842 VPS33BQ9H267 617 aa16.17■□□□□ 0.18
PRDM2-213ENST00000503842 ANTXR1Q9H6X2 564 aa16.17■□□□□ 0.18
PRDM2-213ENST00000503842 MYH13Q9UKX3 1938 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms